Zalophus californianus (California sea lion): 113914027
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Entry
113914027 CDS
T07874
Symbol
TRIM21
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM21 isoform X1
KO
K10651
tripartite motif-containing protein 21 [EC:
2.3.2.27
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
113914027 (TRIM21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113914027 (TRIM21)
04131 Membrane trafficking [BR:
zca04131
]
113914027 (TRIM21)
04121 Ubiquitin system [BR:
zca04121
]
113914027 (TRIM21)
Enzymes [BR:
zca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113914027 (TRIM21)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113914027 (TRIM21)
Membrane trafficking [BR:
zca04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
113914027 (TRIM21)
Ubiquitin system [BR:
zca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113914027 (TRIM21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
Sina_RING
zf-Nse
zf-RING_4
zf-rbx1
AviRa
PanZ
At2g31720-like
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
113914027
NCBI-ProteinID:
XP_027434534
UniProt:
A0A6J2BRJ7
LinkDB
All DBs
Position
11:complement(60157058..60165128)
Genome browser
AA seq
468 aa
AA seq
DB search
MASAAPLAMMWEEVTCPICLDPMVEPMSIECGHSFCNECISKVGRGGGGTCPICKHKFLL
RNLRPNWPLANMVDNLKQMGQSAKEGTQGEQCKVHGEKLHLFCEEDGKTLCWVCSQSQSH
RNHHMVPIEEAAREYQEKLQVALGKLRKGQELAEELEVNISTKRAAWKSQIETHKLRIHA
EFVQQKNFLAVEEQRQLQRLDTEEREQLRILGEVEAALAQKSQALQELVMELERRSRASA
LELLQEVKSVLGRSESWNLKELDVTSPDLRSVCLVPGLKRMLRTCGVHVTLDPHTANPWL
ILSKDRRQVRLGDSQQEVPENEDRFDSYPMVLGAQCFDSGKVYWEVDVTGKEAWDLGVCR
DSVQRKGQFLLSPENGFWTIWRWNEQKYEAGTCPQTPLHLQVPPRQVGIFLDCEAHIVSF
YNITDHGSLIYTFSECAFAGPLRPFFSTGFNDEGRNAAPLVLCPLEMG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcagcgccgttggcaatgatgtgggaggaggtcacgtgccctatctgcctg
gatcccatggtggagcctatgagcattgaatgtggccacagcttctgcaatgagtgcatc
tctaaggtcgggagaggtgggggcggcacctgtcctatatgtaagcacaagttcttgctc
cgaaacctccgacccaattggccactagctaacatggtggacaacctcaaacaaatgggc
cagagtgccaaggagggcacacagggggagcagtgtaaggtacacggagagaaactgcac
ctgttctgtgaggaagatgggaagaccctttgctgggtgtgttcccagtcccagagccac
cgtaaccaccacatggtccctattgaggaggctgctcgggaataccaggagaagctacag
gtggcattagggaaactgagaaaaggacaggagttggctgaggagttggaagtgaatatt
tcaacaaagagagcagcctggaagagccagattgagacacacaaactgaggattcacgca
gagtttgtacagcagaaaaacttcctggctgtggaggaacagcggcaactgcagaggcta
gacacggaggagagggaacaactgagaatcctgggggaggtggaggccgcgctggcccag
aagagccaagccctgcaggagctggtcatggagctggagcggaggagcagggcctcagcc
ctggagctgctgcaggaggtgaaaagtgtcctgggaaggagtgagtcttggaacctgaag
gagctggacgtcacctccccagacctgaggagtgtgtgcctcgtgccagggctgaagagg
atgctgaggacatgtggagtgcacgtcactctggatccgcacacggccaatccatggctc
atcctttcaaaggatcggagacaagtgaggcttggagacagccagcaggaagtgccggaa
aatgaggacagatttgacagttaccccatggtcctgggtgcccagtgctttgactctgga
aaggtttactgggaggtagatgtgacaggaaaggaggcctgggacctgggcgtttgtaga
gactctgtgcaaaggaaggggcaatttttgctcagccctgagaacggcttctggaccatt
tggcggtggaatgagcaaaaatatgaggctggcacctgcccccagactcccctccacctt
caggtgcctccacgccaagttgggatcttcctggactgtgaggcccacattgtgtccttc
tacaacatcactgaccatggctccctcatctataccttctctgaatgtgccttcgctgga
cctctgcggcccttcttcagtactggttttaatgatgaaggaagaaatgcagcccctctt
gtcctctgtccactggagatgggatga
DBGET
integrated database retrieval system
