Zalophus californianus (California sea lion): 113914210
Help
Entry
113914210 CDS
T07874
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04136
Autophagy - other
zca04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113914210 (ATG4C)
04136 Autophagy - other
113914210 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zca01002
]
113914210 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113914210 (ATG4C)
03029 Mitochondrial biogenesis [BR:
zca03029
]
113914210 (ATG4C)
Peptidases and inhibitors [BR:
zca01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
113914210 (ATG4C)
Membrane trafficking [BR:
zca04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
113914210 (ATG4C)
Mitochondrial biogenesis [BR:
zca03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113914210 (ATG4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
113914210
NCBI-ProteinID:
XP_027435022
UniProt:
A0A6J2BXM6
LinkDB
All DBs
Position
4:51207707..51303845
Genome browser
AA seq
458 aa
AA seq
DB search
MEATGTDEVDKLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDENTLLP
ARSGCTIEDHVIAGNVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLL
AQGLVLHFLGRAWTWPDALNIENSDSESWTSNTVKKFTASFEASLSGERELKTPTVSQKK
TIRRYSDDHEMRNEIYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHI
LRKAVEEARHPDLQGITIYVAQDCTVYSSDVIDKQCTSMASDNIDDKAVIILIPVRLGGE
RTNTDYLDFVKGVLSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLETFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVN
GHSRDYDFTSPTTNEEDLFAEDEKKRLKRFSTEEFVLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacaggaacagatgaagttgacaagctaaaaactaaatttatatctgcttgg
aacaacatgaaatatagttgggtgttgaaaacaaaaacatattttagtagaaattcccct
gtattattgcttggaaaatgttaccattttaaatatgaagatgaaaatacactgttacct
gcaagatcaggatgtacaatagaagatcatgtaattgcaggaaatgtagaagaatttcgt
aaagatttcatttcaagaatatggttgacctacagggaagaatttcctcaaatagaaggc
tcggctttgacaacagactgtggttggggctgtacattaagaactggccagatgctattg
gctcaaggactcgtactacactttcttggtagagcttggacctggcctgatgctttgaac
attgaaaattcagactctgaatcatggacttccaacactgtaaaaaaatttactgcatca
tttgaagcatcactttcaggggaaagagaactcaaaaccccaacagtttctcagaagaaa
acaatcaggagatattctgatgatcatgaaatgcgaaatgaaatttatcacaggaaaatc
atctcttggtttggtgattcccctttggctctctttggtttacatcaactaatagaatat
ggaaagaagtctgggaaaaaagctggagattggtatggaccagctgtggttgctcatatt
ttaagaaaagcagttgaagaagcaagacaccctgatttacaaggaataactatttatgtt
gcacaagactgtacagtttacagttctgatgtgattgataagcagtgcacttccatggcc
tctgataatatagatgacaaagctgttattattctaatccctgttagacttggtggggaa
agaaccaacaccgactacttagattttgtaaagggtgttttaagccttgaatattgtgtg
ggtattattggtggcaaacctaaacagtcatactactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc
cctcttgagacattccactgtccttctcccaaaaagatgtcatttcgaaaaatggatcct
agctgtacaataggattttactgtcgaaatgttcaggacttcaaacgagcttctgaagaa
atcactaagatgctgaaaatttcttctaaagagaaatatcccttatttacttttgtaaat
gggcattccagagactatgattttacatctcctacaaccaatgaagaagaccttttcgca
gaggatgaaaagaaaagattaaaaagatttagcacagaagaatttgtcttgctctaa
DBGET
integrated database retrieval system
