Zalophus californianus (California sea lion): 113915083
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Entry
113915083 CDS
T07874
Symbol
NECTIN1
Name
(RefSeq) nectin-1
KO
K06081
poliovirus receptor-related protein 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03266
Virion - Herpesvirus
zca04514
Cell adhesion molecule (CAM) interaction
zca04517
IgSF CAM signaling
zca04520
Adherens junction
zca05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
113915083 (NECTIN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113915083 (NECTIN1)
04517 IgSF CAM signaling
113915083 (NECTIN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113915083 (NECTIN1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113915083 (NECTIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zca04515
]
113915083 (NECTIN1)
04090 CD molecules [BR:
zca04090
]
113915083 (NECTIN1)
Cell adhesion molecules [BR:
zca04515
]
Immunoglobulin superfamily
Nectin family
113915083 (NECTIN1)
CD molecules [BR:
zca04090
]
Proteins
113915083 (NECTIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
ig
I-set
Ig_PVRIG
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
113915083
NCBI-ProteinID:
XP_027436598
UniProt:
A0A6J2C3M8
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All DBs
Position
11:complement(15903307..15966968)
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AA seq
516 aa
AA seq
DB search
MARMGLAGAAGRWWGLALGLTAFFLPGPHAQVVQVNDSMYGFIGTDVVLHCSFANPLPGV
KITQVTWQKATNGSKQNVAIYNPAMGVSVLVPYRERVEFLRPSFTDGTIRLSRLELDDEG
VYICEFATFPAGNRESQLNLTVMAKPTNWVEGTQAVLRAKKGQDDKVLVATCTSANGKPP
SVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFRESLT
LNVQYEPEVTIEGFDGNWYLQRMDVKLTCRADANPPATEYHWTTLNGSLPKGVEAQNRTL
FFRGPINYSLAGTYVCEATNPIGTRSGQVEVNITEFPYTPSPPEHGRRAGPVPTAIIGGV
AGSILLVVIVVGGIVVALRRRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYPD
DSDDEKKPGPLGGSSYEEEEEEEGGGGGERKVGGPHPKYDEDAKRPYFTVDEAEARQDGY
GDRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggctcggatggggcttgcgggcgccgctggacgctggtggggactcgctctcggcttg
accgcattcttcctcccaggcccccacgcccaggtggtccaggtgaacgactccatgtac
ggtttcatcggtacggatgtggtgctgcactgcagctttgccaacccgctgcccggcgtg
aagatcacccaggtcacgtggcagaaggccaccaatggctccaagcagaatgtggccatc
tacaacccagccatgggcgtctccgtgctggtcccctaccgcgagcgcgtggaatttctg
cggccctccttcaccgacggcaccatccgcctctcccgcctggagctggacgacgaggga
gtctacatctgcgagttcgccaccttccccgccggcaatagagaaagccagctcaacctc
accgtgatggccaaacccaccaactgggtagagggtacccaggcagtgcttcgagccaag
aaggggcaggacgacaaggtcctggtggccacctgcacctcggccaatgggaagcctccc
agcgtggtgtcctgggaaacacgcctgaagggcgaagcggagtaccaggagatccggaac
cccaacggcacggtgactgtcatcagccgctaccgcctggtgcccagccgggaagcccac
cagcagtccctggcctgcatcgtcaactaccacatggaccgcttccgggagagcctcacc
ctcaacgtgcagtatgagcccgaggtgaccatcgaggggtttgatgggaactggtaccta
cagcgaatggacgtgaagctcacgtgcagagccgatgctaaccccccagccaccgagtac
cactggaccacgctgaatggctctctccccaagggcgtggaggcccagaacagaaccctc
ttcttcagggggcccatcaactatagcctggcagggacctacgtgtgtgaggccaccaac
cccatcggcacgcgctcgggccaggtggaggtcaacatcacagaattcccctacaccccg
tctcctcccgaacatgggcggcgcgcagggccggtgcccacggccatcattgggggcgtg
gcggggagcatcctgctggtggtgatcgtggtcggagggatcgtggtggccctgcgccgg
cgccggcacaccttcaagggcgactacagcaccaagaagcatgtgtacggcaatggctac
agcaaggcgggcatcccccagcaccacccgcccatggcccagaacctgcagtacccggac
gactcggatgatgagaagaagcccgggcccctgggcgggagcagctatgaggaagaggag
gaggaggagggcggcggggggggcgagcgcaaggtgggcggcccccaccccaaatacgac
gaggacgccaagcggccctacttcaccgtggatgaggcggaggcccgtcaggacggctac
ggggaccggactctgggctaccagtatgaccccgagcagctggacttggccgagaacatg
gtttctcagaacgacgggtctttcatttccaagaaggagtggtacgtgtag
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integrated database retrieval system
