Zalophus californianus (California sea lion): 113915302
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Entry
113915302 CDS
T07874
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04068
FoxO signaling pathway
zca05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
113915302 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
113915302 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zca04121
]
113915302 (RAG1)
Enzymes [BR:
zca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113915302 (RAG1)
Ubiquitin system [BR:
zca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113915302 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4_2
zf-C3HC4
zf-RING_6
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
113915302
NCBI-ProteinID:
XP_027436939
UniProt:
A0A6J2BYL7
LinkDB
All DBs
Position
11:88557380..88560511
Genome browser
AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGLTSAPDEIQHPHIKFSEWKFKLFRVRSFEKAPEEAQVEKKVSSEGKPSLE
QSPAVLDKADGQKPALSQPALNAHPKFLKKSHDDGKARDKAIHQANLRHLCRICGNSFKT
DGHNRRYPVHGPVDGKTQVLLRKKEKRATSWPDLIAKVFRIDVKADVDSVHPTEFCHNCW
RILYRKFSGAPCEVYFPRNATMEWHPHTPSCDICHTARQGLKRKSRQPNGQLSKKLKTVV
DRARRAHWHKRRAPARISSEEVMQKISNCSNIHLSTKLLAVDFPAHFVKSISCQICKHIL
ADPVETTCKHVFCRICILRCLKVIGSNCPCCQYPCFPTNLESPVKSFLSILNSLMVKCPA
KECNEEVSLEKYNHHVSSHKESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADREEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSSTDVGIIDG
LSGLSSSVDDYTVDTIAKRFRYDSALVSALMDMEEDILEGVRAQDLDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPAVPEKAVRFSFTVMKITIAHGSENVKVFEEVKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSQLMLEMGGILRTFKFIFRGTGYDEKLIREVEG
LEASGSVYICTLCDTTRLEASQNLVFHSITRSHSENLERYEVWRSNPYHESVEELRDRVK
GVSSKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYRNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSEERHEALRELMDLYLKMKPVWRSTC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNAYKNSGFTLS
SQSGVGDPLGPEDSLETQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccaccctgggactcacttctgccccagatgaaattcagcac
ccacatattaaattttcagaatggaaatttaaactgttcagggtacgatcttttgaaaag
gcacccgaagaagctcaagtagaaaagaaagtttcctctgaggggaaaccctctctggag
caatctccagctgtcctggacaaggctgatggtcagaagccggctctgagtcaaccagca
ttaaatgctcaccctaagtttctgaagaaatcccatgatgatgggaaagcaagagacaaa
gcaatccaccaagccaaccttcgacatctctgccgtatctgtgggaattcttttaaaact
gacgggcacaataggagatatccagtccacgggcctgtggatggtaaaacccaagtcctt
ttacgaaagaaggaaaagagagccacttcctggccagacctcattgccaaggtcttccgg
atcgatgtgaaagcagatgttgactcagtccaccccactgagttctgccataactgctgg
cgcatcctgtacaggaagtttagcggtgccccatgtgaggtttacttcccaaggaatgca
accatggagtggcacccccacacaccatcctgtgacatctgccacactgcccgccaggga
ctcaagaggaagagtcgtcagccaaacgggcagctcagcaaaaaactcaaaactgtggtt
gaccgagcgagaagagcccattggcacaagagaagagctccggcaaggattagcagcgag
gaagtgatgcagaagatttccaactgcagtaatatacatcttagtaccaagcttcttgca
gtggacttcccagcacattttgtgaaatccatctcctgccagatttgcaaacacattctg
gctgaccctgtggagaccacctgtaagcatgtattttgcaggatctgcattctcagatgc
ctcaaagtcataggcagcaactgtccctgttgccaatatccctgcttccctaccaacctg
gagagtccagtgaagtcctttctgagcatcttgaattccctgatggtgaaatgtccagcc
aaggagtgcaacgaggaggtaagcctagaaaaatataatcaccacgtctcaagccacaag
gaatccaaagagacttttgtgcatattaacaaagggggtcggccccgtcagcatctcctg
tccttgacccgaagggctcagaagcaccgcctgagggagctcaagctgcaagtcaaggct
tttgccgacagagaagaaggtggagatgtgaaatccgtgtgtctgaccttgttcctgctg
gcgctgagggcaaggaatgagcacagacaagcggacgagctggaggccatcatgcaggga
cggggctctggcctgcagccagctgtgtgcttggccatccgtgtcaacaccttcctcagc
tgcagtcagtaccacaagatgtacaggactgtgaaagccatcaccgggaggcagattttt
cagcctttgcatgcccttcggaatgctgagaaggtcctcctgccaggctaccaccccttt
gagtggcagccccctctgaagaacgtgtcctccagcaccgacgtgggcattattgatggc
ctgtccggcctgtcctcctcggtggatgactacactgtggataccattgcgaagcgcttc
cgctacgattcggctttggtatctgctctgatggacatggaagaagacatcttggaaggc
gtgagagcccaagaccttgatgactacctgaatggccccttcaccgtcgtggtgaaggag
tcttgtgacggaatgggagatgtgagcgagaagcacgggagcgggccagccgttccagaa
aaggcagttcggttttcgttcacggtcatgaaaattactatagcccatggctcagaaaat
gtgaaggtgtttgaagaagtcaaacccaactctgaactgtgttgtaagcccctgtgtctc
atgctggcagatgagtctgaccacgagaccctgacggccatcctgagtcctctcattgcc
gagagggaggccatgaagagcagccaattaatgcttgagatgggaggcatccttcggact
ttcaagttcatcttcaggggcaccggatatgatgagaaactcatccgggaagtcgaaggc
ctcgaggcttctggctcagtctacatttgtaccctttgtgacaccacccgcctagaagcc
tctcaaaatcttgtcttccactccatcaccagaagccactctgagaacctggagcgctat
gaggtctggcgttccaacccataccacgagtcagtggaagaactgcgggatcgggtgaaa
ggggtctcatcgaaacctttcatcgagactgtcccttccatagatgcactccactgtgac
attggcaatgcagctgagttctacaagattttccagctagagataggggaggtgtatagg
aatcccaatgcttccaaagaggaaaggaaaagatggcaggctacattggacaagcatctc
cggaagaagatgaacctgaaacccatcatgaggatgaatggcaactttgccaggaagctc
atgaccaaagagacagttgaagcagtttgtgaattaattccctctgaggagaggcatgaa
gctctgagggagctgatggacctttacctgaagatgaagcctgtatggcgatcaacgtgt
cccgcaaaagagtgcccagaatccctctgccagtatagcttcaattcacagcgttttgct
gagctcctttctaccaagttcaagtatagatatgagggcaaaatcaccaattattttcac
aaaaccctggcacacgtccctgaaattattgagagagatggctccattggggcatgggca
agcgagggaaatgagtctggcaacaaactgttcaggcgcttccgaaaaatgaatgccaga
cagtccaaatgctatgagatggaagatgtcttgaaacaccactggctgtatacctccaaa
tacctgcagaagtttatgaatgctcataatgcgtataaaaactctgggtttaccttaagc
tcgcagtcaggcgtaggggacccattaggcccggaggactctctggaaactcaagattca
atggaattttaa
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