Zalophus californianus (California sea lion): 113915424
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Entry
113915424 CDS
T07874
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zca04515
]
113915424 (DSCAML1)
Cell adhesion molecules [BR:
zca04515
]
Immunoglobulin superfamily
DSCAM family
113915424 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
113915424
NCBI-ProteinID:
XP_027437159
EnsemblRapid:
ENSZCAG00025017432
UniProt:
A0A6J2BZ66
LinkDB
All DBs
Position
11:complement(14057562..14398318)
Genome browser
AA seq
2053 aa
AA seq
DB search
MWLVTFLLLLDSLHKARPEDVGTSLYFVNDSLQQVTFSSSVGVVVPCPAAGSPSAALRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPNIRVK
AVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITHHG
GLYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWAG
HTVELPCTASGYPIPAIRWLKDGRPLPADSRWTKRVTGLTISDLRTEDSGTYICEVTNTF
GSAEATGTLTVIDPLHVTLTPKKLKTGIGSTVILSCALLGSPEFTIRWYRNTELVLPDEA
VSIRGLSNETLLITSAQKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVSSFSEKVVN
PGEQFSLMCAAKGAPPPTVTWALDDEPIVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDG
GVYRCTARNSVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYK
DALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQ
PFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVS
LKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPK
VMWKHAKGSGSPQQYHPVPLTGRTQILANSSLLIRHVLEEDMGYYLCQASNGVGTDISKS
MFLTVKIPAMITSHPNTTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIT
TKDNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKA
RSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSI
RMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIR
GYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSE
INATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWG
EMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAV
PSSASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQ
YLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPA
VKWTKDSEDSAIPVSMDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLV
QVPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSGERSF
KLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNL
QGWNNGGCPITAIVLEYRPKGTWAWQGLRANSSGEVFLTELREATWYELRMRACNSAGCG
NETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKRKEKR
LKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKA
TIPVTDAEFSQAVNPQSFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKSVKAAHST
RNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVS
TESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMST
PSEPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPLYAKSEAFFRKADGREPC
PVVPPREASIRNLARTYHTQARHLTLDPASKPLGLPHPGAPAAASTATLPQRTLAMPAPP
AGTAPPAPGPTPAEPPAAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQK
QGAGAYSKSYTLV
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaactttcctcctgctcctggactctttacacaaagctcgccctgaagat
gtcggcaccagcctctactttgtaaatgactccttgcagcaggtgaccttttccagctcc
gtgggggtggtggtgccctgcccggccgcgggctcccccagcgcggcccttcgatggtac
ctggccacgggggacgacatctacgacgtgccgcacatccggcacgtccacgccaacggg
acgctgcagctctaccccttctccccctccgccttcaatagctttatccacgacaatgac
tacttctgcaccgcggagaatgcagccggcaagatccggagccccaacatccgcgtcaaa
gcagttttcagggaaccctacaccgtccgggtggaggatcaaaggtcaatgcgtggaaac
gtggccgtcttcaagtgcctcatcccctcttcagtgcaggaatatgttagcgttgtgtcc
tgggagaaggacacggtctccatcatcccagaaaacaggttttttatcactcaccacggc
gggctgtacatctctgacgtgcagaaggaggatgccctctccacctaccgctgcatcacc
aagcacaagtatagtggggagacccggcagagcaatggggcccgcctctccgtaacagac
cctgccgagtcgatccccaccatcctggatggcttccactcccaggaagtgtgggcgggc
cacaccgtggagctgccctgcaccgcctccggctaccccatccctgccatccgttggctc
aaggacggccggcccctcccggccgacagccgctggaccaagcgcgtcacggggctgacc
atcagtgacctgcggacggaggacagcggcacctacatttgtgaggtcaccaacaccttc
ggctccgcagaggccacgggtaccctcacagtcatcgacccccttcacgtgaccctgaca
ccaaagaagctgaagaccgggatcggcagcacagtcatcctctcctgtgccctgctgggc
tccccggaattcaccatccgctggtaccgcaacactgagctggtgctgcctgatgaggcc
gtctccatccgtgggctcagcaacgagactctgctcatcacctcagcccagaagagccac
tccggggcctaccagtgctttgctacccgcaaggcccagaccgcacaggacttcgccatc
attgtgctggaggatggcacgccccgcatcgtctcatccttcagcgagaaggtggtcaac
cccggggagcagttctcgctgatgtgtgcggccaagggcgccccgccccccactgtcacc
tgggccctggacgacgagcccatcgtgcgggacgggagccaccgcaccaaccagtacacc
atgtcggatggcaccaccatcagccacatgaacgtcacgggcccccagatccgcgacggg
ggcgtataccggtgcacggcgcggaactcggtgggcagtgctgaatatcaggcgcgaata
aacgtaagaggcccccccagcatccgggcgatgaggaacatcaccgccgtcgccgggcgg
gacaccctcatcaactgcagggtcatcggctacccctactactccatcaagtggtataag
gacgcgctgctgctgcccgacaaccaccggcaggtggtgttcgagaacgggacgctgaag
ctgaccgacgtgcagaagggcatggacgagggggagtacctgtgcagcgttctcatccag
ccccagctgtccatcagccagagcgtccatgtggctgtcaaagtgccccctctaatccag
ccctttgagttcccacccgcctccatcggccaactgctctatatcccctgcgtggtgtcc
tcgggggacatgcccatccgcatcacctggaggaaggacggacaggtgatcatctcaggc
tcaggcgtgaccatcgagagcaaggaattcatgagctccctgcagatctccagcgtctcc
ctcaagcacaatggcaactacacgtgcattgccagcaacgcggcagccaccgtgagccgg
gagcgccagctcatcgtgcgtgtgcccccgcgatttgtggtgcagcccaacaaccaggac
ggcatctacggcaaagctggcgtgctcaactgctcagtggatggctaccccccgcccaag
gtcatgtggaagcatgccaaggggagcgggagcccgcagcagtaccacccggtacccctc
accggccgcacccagatcctggccaacagctcactgctgatccgccacgtcctggaagag
gacatgggctactacctctgccaggccagcaacggcgtgggcaccgacatcagcaagtcc
atgtttctcaccgtcaagatcccagccatgatcacctcccaccccaacaccaccatcgcc
atcaagggtcatgcgaaggagctcaactgcacagcgcggggtgagcggccaatcattatc
cgctgggagaagggggacaccgtcatcgaccccgaccgagtcatgcggtatgccatcacc
accaaggacaacggcgacgaggttgtctccacgttgaagctcaagccagctgaccgtggg
gactctgtgttcttcagctgccatgccatcaactcatatggggaggaccggggcttgatc
caactcactgtgcaagagccccctgaccccccagagctggagatccgggaggtgaaggcc
cggagcatgaacctgcgctggacccagcgattcgacgggaacagcatcatcacgggcttc
gacattgaatacaagaacaaatcagattcctgggacttcaagcagtccacacgcaacatc
tcccccaccatcaaccaggccaacatcgtggacttgcacccagcatctgtgtacagcatc
cgcatgtactccttcaacaagattggccgcagcgagccgagcaaagagctcaccatcagc
actgaggaggctgctcctgatgggccccctatggatgtcaccttgcagccggtaacctca
cagagtatccaagtgacctggaaggcgcccaaaaaagagctgcagaatggcgtcatacgg
ggctaccagatcggctacagggagaacagccccggcagcaatggacaatatagcatcgtg
gagatgaaagctaccggggacagtgaggtctacaccctggacaacctcaagaagtttgcc
caatatggggtggtggtccaggccttcaatcgggctggcacagggccctcatccagcgag
atcaatgccaccaccctggaggacgtgcccagccagccccccgagaacgtccgggccctg
tccatcacctccgatgtggctgtcatctcctggtcagagcccccacgcagcacgctcaat
ggagtccttaaaggctatcgggtcatcttctggtcactctacgtggatggggagtggggc
gagatgcagaacattaccaccacgcgggagcgggtggagctgcgaggtatggagaagttc
accaactacagtgtgcaggtgctggcctacacgcaagccggggacggcgtgcgtagcagc
gtgctctacatccagaccaaggaggacgttccaggtccccctgctggcatcaaagctgtc
ccttcatccgccagcagtgtggtcgtgtcttggctccccccaaccaagcccaatggggtg
atccgcaagtacaccatcttctgctccagccctgggtctggccagccggctcccagcgag
tatgagacaagtccggagcagctcttctaccggatcgcccacctgaaccgtgggcagcag
tacttgctgtgggtggctgccgtcacctctgccggccggggcaacagcagcgagaaggtc
accattgagcccgcaggcaaggccccagcaaagatcatctcatttggaggcactgtgaca
accccctggatgaaagatgtccgactgccttgcaattcggtgggagatccagcccctgct
gtgaagtggacaaaggacagtgaagactcagccatccccgtgtccatggacgggcaccgg
ctcatccataccaacggcacgctgctgctgcgtgctgtgaaggctgaggactcaggctac
tacacctgcacggccaccaacactgggggcttcgacaccatcatcgtcaaccttctggtg
caagttcccccggaccagccccgcctcactgtctctaaaacctccgcttcgtccatcacc
ctgacctggattccaggtgacaatgggggcagctccatccgaggcttcgtgctgcagtac
tcggtagacaacagcgaggagtggaaggacgtgttcatcagctcaggcgagcggtccttc
aagctggacagcctcaagtgtggcacgtggtacaaggtgaaactggcagccaagaacagc
gtgggctccgggcgcatcagcgagatcatcgaggccaagacccacgggcgggagccctcc
ttcagcaaagaccagcacctgttcacccacatcaactccacgcatgctcggcttaacctg
cagggctggaacaacgggggctgcccgatcacagccatcgtgctggagtaccggcccaag
ggcacctgggcctggcaggggctacgggccaacagctccggggaggtgtttctgaccgag
ctgcgcgaggccacgtggtacgagctgcgtatgcgggcttgcaacagcgctggctgcggc
aacgagactgcccagttcgccaccctggactatgatggcagtaccatccctcccatcaag
tctgctcaaggggagggggatgatgtgaagaagctgttcaccatcggctgcccggtcatc
ctggccactctgggggtggcactgctcttcatcgttcgcaagaagaggaaggagaagcgg
ctgaagcgtctccgagatgcaaagagtctggcagaaatgttgataagtaagaacaaccga
agttttgacacccctgtgaaggggccaccccagggcccaaggctacacattgacatcccc
agagttcagctactcatcgaggacaaggagggcatcaagcagctgggagatgacaaagcc
accattcccgtgacggacgctgagttcagccaagctgtcaacccacagagtttttgcact
ggtgtctccttgcaccacccagccctcatccagagcacgggacccctcatcgacatgtct
gacatccggccaggcaccaacccagtgtccaggaagagtgtgaaggcggcccacagcacc
cggaacaggtactcgagccagtggactctgaccaagtgccaggcctccacacctgcccgc
accctcacctctgactggcgcaccgtggggtcccagcacggggtcactgtcacggagagt
gacagctacagtgccagcctgtcccaggacacagacaaaggacggaacagcatggtgtcc
acagagagcgcctcgtccacctacgaggagctggcccgggcctatgagcacgccaagctg
gaggagcagctgcagcatgccaagttcgagatcaccgagtgcttcatctcggacagctcc
tccgaccagatgaccacaggcaccaacgagaacgccgacagcatgacgtccatgagcacg
ccctcggagcccggcatctgtcgcttcaccgcctccccgcccaagccccaggatgccgac
cgaggcaagaacgtggctgtgcccatcccgcaccgggccaacaagagtgactactgtaac
ctgcccctgtacgccaagtcggaggccttcttccgaaaggcagatggccgtgagccctgt
ccggtggtcccaccccgagaggcttccatccggaacctggctcgaacctaccacacccag
gctcgccacctgaccttggaccctgccagcaagcccctgggcctcccgcacccaggggcc
cctgctgccgcctccacagccactttacctcagaggactctggccatgccagcaccccca
gccggcacagccccgccagctcccggccccacccctgccgagcccccggctgcccccagc
gctgcccctccggcccccagcaccgagcctccgcgggccgggggcccacacaccaaaatg
gggggctccagggactcacttctcgagatgagcacatcgggggtagggaggtctcagaag
cagggggcaggggcctactccaaatcctataccctggtgtag
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integrated database retrieval system
