Zalophus californianus (California sea lion): 113915464
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Entry
113915464 CDS
T07874
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113915464 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113915464 (CSTF3)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
113915464 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
113915464
NCBI-ProteinID:
XP_027437243
UniProt:
A0A6J2C5E5
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Position
11:complement(85623018..85692596)
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AA seq
717 aa
AA seq
DB search
MSGDGAPEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESNAVLTKAVKRPNEDSDDDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacggcgccccggagcaggcagctgagtatgtcccagagaaggtgaagaaa
gccgaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactatacattgaagcagagataaaagctaaaaat
tatgacaaggttgaaaagctatttcagagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcatatgttcgagaaaccaagggtaaactgccaagttacaaagaa
aaaatggctcaagcatatgactttgcactagataaaattggaatggaaattatgtcttat
cagatttgggtggattacatcaatttcttaaaaggcgtggaagctgttggatcttatgca
gaaaatcagagaataacagctgtccgaagagtttatcaacgaggttgtgttaatccaatg
atcaacattgaacaactctggagagactataacaagtatgaagagggtatcaatattcat
ttagctaaaaaaatgattgaagatcggagccgagattacatgaatgctaggcgtgtagca
aaggaatatgagacagtaatgaaaggtttggaccgcaatgctccctcagtgcctcctcag
aatactccccaagaagcccagcaggtggatatgtggaagaaatacatacagtgggaaaag
agcaaccctcttcgtacagaagatcagacgcttatcacaaaaagagttatgtttgcttat
gaacagtgcctgcttgtactgggccatcaccctgatatttggtatgaagccgcccagtat
cttgagcagtcaagtaaactgcttgcagaaaagggggatatgaataatgccaaattattt
agtgatgaagctgctaatatatatgaaagagccataagcactttattaaagaagaatatg
cttctttattttgcatatgcagattatgaagagagtcgcatgaaatatgagaaagttcac
agtatatataacagacttctggcaattgaggatattgaccccaccttggtatatatccaa
tatatgaaatttgcaagaagagcagaaggtatcaaatctggaagaatgatatttaaaaaa
gcaagagaagataccagaacccgccaccatgtctatgttactgcagcactcatggagtat
tactgtagtaaggacaaatctgttgcctttaagatttttgagctgggtctaaagaaatat
ggagacattccagaatatgtcttggcctatattgactatctttctcacctcaatgaggac
aataatacccgagttttgtttgaacgagtcttaacctctggaagccttcctcctgagaag
tctggagaaatctgggcccgatttctagctttcgaaagtaacattggtgatctagctagc
atactcaaagtggagaaaagacggtttacagcattcaaagaagagtatgaaggcaaagaa
acagctctattggtggacagatataagttcatggacttatatccttgctcggcaagtgaa
ctaaaagcgcttggttataaggatgtctcccgtgctaagctagcagctataattccagac
ccagttgtagctccttctatagtgcctgttctgaaagatgaagtggatagaaaaccagaa
taccctaaaccagacactcagcagatgattccatttcagccacgacatttagcaccaccc
ggcttacaccctgttcctgggggtgtgttcccagtgccacctgcagccgtcgttctaatg
aaactcctccctcctcccatctgcttccagggtccttttgtacaagtggatgaactgatg
gaaattttccgaagatgcaagataccaaatactgttgaggaagctgtgcggatcatcaca
ggcggcgccccggagctggccgttgagggcaacggcccagtggagagcaacgccgtactc
accaaggcggtcaagaggcccaacgaggattccgatgatgatgaagaaaagggagctgtc
gttccccccgttcatgacatctacagagcgcggcagcagaagcgaattcggtga
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