Zalophus californianus (California sea lion): 113915523
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Entry
113915523 CDS
T07874
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04270
Vascular smooth muscle contraction
zca04360
Axon guidance
zca04611
Platelet activation
zca04625
C-type lectin receptor signaling pathway
zca04810
Regulation of actin cytoskeleton
zca05135
Yersinia infection
zca05152
Tuberculosis
zca05163
Human cytomegalovirus infection
zca05200
Pathways in cancer
zca05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
113915523 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
113915523 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
113915523 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
113915523 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
113915523 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
113915523 (ARHGEF12)
05205 Proteoglycans in cancer
113915523 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
113915523 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
113915523 (ARHGEF12)
05152 Tuberculosis
113915523 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113915523 (ARHGEF12)
Membrane trafficking [BR:
zca04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113915523 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
Motif
Other DBs
NCBI-GeneID:
113915523
NCBI-ProteinID:
XP_027437381
UniProt:
A0A6J2C217
LinkDB
All DBs
Position
11:16502569..16646794
Genome browser
AA seq
1543 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSASHDFDPTDSPSRKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLAESEVEPSVTGHMSPIMTSPHSPG
ASGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYNRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAVVTSSKSLGDPLTVSEVEADPGDGLGRTDSSSGDAS
RPSSDSADSPKSALKERIYLEENPEKSEVTQDTDIQSLIGSPSPRIAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVSVPDEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKLDAERDKDRVTLEKERACAEQIVAKIEEVLMTAQAVEEDK
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMELQKQRHPKHLSTPSSVSPEPQDPAKLRQSGLAGEGTDVGY
LPANSTSSVASGATPSQEGGKENDTGSKQVGETPASGDCIDSTPRTPNTVFDFPPPPLDQ
VQEEEWEVERVTEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPSEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHIGLNEQMKAVRKRNETSVIDQIGEDLLTWFSGPGEDKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPMEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSAK
PIPLPQSPPCEGDNDEEAAPKLKVEHHSISVPGLQSPDRDLGLESPLISSKPQSHSLGTS
GKSEVDDLFVAERQFAKEQHADGTLQEAGASYQITTPDPHLPASEERWALDALRNLGLLK
QLLVQQLGLTEKSAQEDWPHFPSYRTASSGVQTDGGAQNSENSKAYPPVEGQMPFRTGTG
DVATCHSPRTSTESPAPRDSVVLAFQDSQASTIFAMDHMLMTPEMPPAEPEGSLDESGEH
FFDAREAHSDDNPSEGDGAVKKEEDVNLRISGNYLILDGYEAVQESSTDEEVASSLPLPP
ATGIPSMDSAPPQHHSPQRAHSDGAASPFTPEFLVQQRWGAMDDSCFEIQSPPSCADSQS
QIMEYIRKIEADLEHLKKVEESYSRLCQRLAGSALTDKHSDKS
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
gggagtattttgaaccgagagtcaccaacagataagaagcagaaagttgagcgcagtgca
tcacatgattttgatcctacagatagcccctccaggaagacaaagtctagttcagaggag
agtagatccgagatatatggtcttgttcaacgttgtgtgatcatccagaaggatgacaat
ggatttgggctgacggtcagtggagacaatccagtcttcgtacagtctgtcaaagaagat
ggagcagccatgcgggctggggtacagacaggtgatcgaatcatcaaggtgaatggaact
ctggtgactcattcaaaccatttggaagtggtgaagctaatcaaatctggttcctatgta
gctctcactgtgcagggacgcccacctgggtcgccccagattccactcgccgaatctgaa
gtagagccgtcagtcactggacatatgtctcccatcatgacatcccctcattcacctgga
gcatctgggaacatggagagaattactagtcctgtgctcatgggggaggaaaacaatgtg
gttcataaccagaaagtagaaattctgagaaaaatgttacagaaagaacaggaacggctg
cagttattgcaggaagattacaaccgaacacctgcccaaagattgctaaaagagatccaa
gaggccaagaaacacattcctcagctgcaagagcagctatccaaagccacaggctctgct
caggatggagctgtcgttacatcctccaagtctttaggtgaccccctgacagtcagtgag
gtggaagccgatcctggtgacgggctaggcagaactgactctagcagtggagatgcttct
cggcccagtagtgacagcgcagatagtcccaagagtgccctgaaagagaggatttatcta
gaggaaaacccagagaaaagtgaagtgactcaggacactgatattcagtcactcatcggg
agtccctctccccgtatagcacctcatattattggagcagaggatgatgatttcggtact
gaacatgaacagatcaacgggcagtgcagctgtttccagagcattgaactgctgaaatct
cgccctgcccacctggctgttttcttacaccacgttgtctcacagtttgaccctgcgacg
ctgctttgttatctctattcagacctgtataagcagaccaattccaaggagactcgtcgt
gtcttccttgagtttcatcagttcttcctggatcgatctgcacacctgaaagtttctgtg
cctgatgaaatatcagtagatctagaaaaaagaagacctgagcttatacccgaggatttg
caccgccactatatccaaactatgcaggaaagagtccacccagaagtccagaggcacttg
gaagattttcggcagaagcgtagcatggggctgaccttggctgaaagtgaacttactaaa
ctcgacgcagagcgagacaaggaccgggtaactttggagaaggaacgggcatgtgcggaa
cagatcgttgccaaaattgaagaagtgttgatgactgctcaggctgtagaagaagataag
agttcaacaatgcagtatgttatccttatgtacatgaagcacttgggggtaaaagtgaaa
gaacctcgaaatttggagcacaagcggggtcggattggattccttccaaaaatcaagcag
agtatgaagaaagatcgagaaggcgaagaaaaagggaagcgcagaggattccccagcatc
ctgggacccccaaggagaccaagccgtcatgacaacagtgcaattggcagagccatggag
ctgcagaaacagcgccacccaaagcacttatccacaccctcttctgtaagtcctgagcct
caggaccctgctaagttgcgccagagtgggctagcaggtgaaggaacagatgtcggatac
ctgccagccaattccacgtcctctgtggcgtccggggccactccttcccaggaaggaggg
aaagagaatgatacaggatcaaagcaagttggagaaacaccagcatctggagactgcata
gatagcacccctcggactcccaatactgtctttgatttcccacctcctcccttagaccaa
gtgcaggaggaggaatgggaagtggaaagggtgactgaacatgggacaccaaagcccttt
cgaaagtttgacagcatagcttttggagaaagtcaaagtgaggatgaacagtttgaaaat
gacttagagacagatccacccaactggcaacagctcgttagtcgagaagtgttactggga
ctaaagccttctgagatcaaaagacaggaagtaattaatgaattattctacactgaaaga
gctcatgttcgaacactgaaggttcttgatcaagtattctatcagcgagtgtctagagaa
ggaattctgtcaccttcagaactacggaaaattttttcaaacttggaagatattcttcaa
cttcatattggattgaatgagcaaatgaaggctgttcgaaagaggaatgagacctcagtt
attgatcagattggagaagatttgctgacctggttcagtggaccaggggaggacaagttg
aagcacgccgctgctaccttttgcagtaaccaacctttcgccctggaaatgatcaagtct
cgtcagaaaaaggattctcgattccagacctttgtgcaagatgctgagagtaatcctctg
tgtcgtcgtctgcagctgaaggatatcattcctacccaaatgcagaggcttacgaagtac
cctcttctgttggataatattgccaaatacacagaatggccaatggaaagggagaaggtg
aagaaagctgcagatcactgtcgtcagatcttaaattatgtaaatcaggctgtcaaggag
gcagaaaacaaacagcgtttagaagactatcaacgtcgtctggatacctccaatctgaag
ttgtcagagtacccaaacgtggaagagctcaggaatttggatttaacaaaaaggaagatg
atccatgaagggccattggtctggaaggtgaatcgagataaaactattgatctatacaca
ttgctgctcgaagacattcttgtattgttacaaaagcaggatgacagactggtgttaaga
tgtcatagtaagattctggcatctaccgctgatagcaaacacacatttagccctgtcatt
aagttgaatacagtgttggttcgacaagtggcaacagataacaaagctttatttgtcatc
tccatgtcagacaacggagcccaaatttatgaactggtggcacagaccgtttccgaaaag
accgtctggcaagacctcatctgtcggatggctgcatccgtgaaggaacagtccgcaaag
ccaatcccattgccacagtcaccaccttgcgaaggagacaacgatgaagaagcagctcca
aagttaaaagtggaacatcacagcatttcggtccctggtctgcagagtccagacagagat
ttgggattagagtctcccttaatatcgtcaaaacctcagtctcattcactcggtacctct
gggaaatccgaggtagatgatctgtttgtggctgagagacagtttgctaaggagcagcat
gcagatgggactctgcaggaagctggagcaagttatcaaatcacaaccccagacccacac
ttgcctgcctcagaagaacggtgggcattggatgcactaaggaatttgggcttgctgaag
cagctgctcgtacaacagctgggtttgactgagaagagtgctcaggaagactggccacat
ttcccaagctacaggacagcgtcttcaggggtgcagacagacggtggggcccagaactcg
gagaacagtaaggcctatcctcctgtcgaaggacagatgccctttagaactggaactggt
gacgttgcaacttgtcacagtccacggacttcaactgaatctccggctccacgggattca
gtggtactggccttccaagatagccaggcaagtaccatcttcgccatggaccacatgctt
atgaccccagagatgcctcctgcagagccagaagggagtctcgatgagagtggagagcac
ttttttgatgcccgtgaagcacacagcgatgataatccatcagaaggtgatggagcagtt
aagaaggaagaggatgttaatttgcgcatctcaggaaactatttgattctggatggctat
gaagcggtgcaggagagctccacagatgaggaggttgcctcctcacttcccctgccaccc
gcgacaggcatcccctccatggactctgcccccccgcagcatcactcgccccagcgtgcc
cattctgatggggcggcttcaccgttcaccccagaattcctggtccagcagcgctgggga
gctatggatgattcctgttttgagatccagagtcccccctcttgtgcagattcacagagc
cagatcatggagtacattcgtaagatcgaggctgaccttgaacacttaaagaaggtggag
gaaagttacagcaggctttgccaaaggctggctgggtcagccctcacagacaagcactca
gataaaagttag
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integrated database retrieval system
