Zalophus californianus (California sea lion): 113916164
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Entry
113916164 CDS
T07874
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113916164 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zca03400
]
113916164 (XPC)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
113916164 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
zf-B_box
Motif
Other DBs
NCBI-GeneID:
113916164
NCBI-ProteinID:
XP_027437895
UniProt:
A0A6J2C133
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Position
1:55558026..55587256
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AA seq
944 aa
AA seq
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MVRKRAAGRKAQGREPCGRKAKGENMAGHEEKEADVLEDKKPLKRSLLSKVSQGKRKRGC
SDPGGPAKKKAAQVTVKSENPKVVKDEALSDEEEFRDSARARKKAQPLQREAAVAKGRCE
GDEEEESEDDWEEVEELGEPVPGDVGENAAFSKSVLPVKPVEIEIETPQQAKARERSERI
KVEFETYLRRMMKRFGKEVREDTHKVHLLCLLANGFYRSNICSQPDLLAIGLSIIPAHFT
RVPPQDVDACYLSNLVKWFVGTFTVNADLSTNKQDGLQTTLERRFAIYSARDDEELVHIF
LLILRALQLQTRLVLSLQPLPLKLPAAKGKKAAKETSAEDPGGSLETCSPVPESQTKPKT
SQGTGQEATSSKVSGGPSTKGKRSKAAVVKKKRREPSSSGEEEHKAGGRQENTQRRRPGR
ERQVASRVSYKEESGSDKGSSGSDFELSSAEAPHSSDEDSEPGLSRQRRAPAPQRTKAGS
KSDSRTQRGRHPQHPKHPGFPAASTSSSSSKSKRGKKISSDGEGAEREKAAGIDQWLEVF
CEQEEKWVCVDCVHGVVGQALACYKYATKPMTYVVGIDGDGWVRDVTQRYDPDWMTATRK
CRVDAKWWAETLRPYQSPLVEREKKEDSEFQAKHLGQPLPTVIGTYKNHPLYALKRHLLK
YEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGYSNRAR
KARLAEPQLQDHNDLGLFGEWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCVQLN
LPNLHRVARKLDIDCVQAITGFDFHKGYSHPITDGYIVCEEYKDVLLAAWENEQALIEKR
EKEKREKRALGNWKLLARGLLIRERLKLRYGDKSEAGAPQAPAGDGLSSDEEEGTSSQAE
ASRILAASWPQNREAEEEQKLKCPKKTKREKAAAASHLFPFERL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggttcggaagcgcgcggccggtaggaaggcccagggacgcgaaccgtgcggccggaag
gccaagggcgagaacatggccgggcatgaggagaaggaggcggatgtcttggaagacaag
aaacctctaaagaggagccttctctccaaagtctcacaaggcaagaggaagagaggctgc
agtgatcctgggggtccagccaaaaaaaaagcggcccaggtgactgtcaaatctgaaaat
cccaaggtcgtgaaggatgaagccctcagcgatgaggaggagttcagggactccgcccgt
gcccgcaagaaggcacagcccttacagagagaggctgccgtggccaaaggccgctgtgaa
ggagacgaggaggaggaaagcgaggatgattgggaagaggtcgaagaacttggtgaacct
gtgccaggtgacgtgggagaaaatgcggccttttctaaatctgtcctgcctgtgaaacca
gtggagatagagattgaaacgccccagcaggcgaaggcaagggagagaagtgaaaggata
aaagtggagtttgagacctatcttcggaggatgatgaaacgtttcggtaaagaagtccgt
gaggacacgcacaaggttcacctattgtgcctgctggcaaatggtttctatcgaagtaat
atctgcagccagccggatctgcttgctatcggcctgtccatcatcccagctcactttacc
agagtgccacctcaagacgtggatgcctgttacctgtcaaacctggtgaaatggttcgtt
ggtacatttacagttaatgcagacctatcaaccaacaagcaagatggtctacagacgaca
ttggaaaggaggtttgctatttactctgcgcgggatgatgaagagttggtccatatattt
ttactgatcctccgggccttgcagctccagacccgactggtgctgtctctacagccgctt
cctctgaagttacctgcagcaaagggaaagaaagctgccaaggagacatctgcagaggat
cctggaggctccttggaaacttgcagcccagttccagaaagccaaaccaaacccaagacc
agccaaggaaccggacaggaggccacgtcttctaaggtctctggaggtccaagtaccaaa
gggaagaggagcaaggcagccgtggtcaagaagaaacggagagagccctcctccagtggg
gaagaagagcacaaggcgggagggcggcaggagaacacccagagacgtcggcctggccgg
gagcggcaggtggcctccagggtgtcttataaagaagagagtgggagtgacaagggcagc
agcggctctgacttcgagctctccagtgcggaagcccctcattcatctgatgaggattct
gagcctggcctttccaggcagaggagggccccagccccccagaggacaaaggcagggtcc
aagagtgactccaggacccaacgtggaaggcaccctcagcaccccaagcaccccggcttt
ccagcagcatccacaagttcttcaagcagtaagagtaagcgaggcaagaaaatctccagt
gatggtgagggggcagaaagagagaaagcagctggtatagaccagtggctagaggtgttc
tgtgagcaggaggaaaagtgggtgtgtgtggactgtgtgcatggtgtggtaggccaggct
ctggcctgttacaagtatgccaccaagcccatgacctacgtggtgggcatcgacggtgat
ggctgggtccgggatgtcacccagagatacgacccagactggatgactgcgacccgcaag
tgccgggttgatgccaagtggtgggctgaaaccctgagaccataccagagcccattggtg
gagagggagaagaaggaagactcagagttccaggcaaagcacctgggccagcctttgcct
actgtcattggcacatataagaaccaccctctgtacgcgctgaagaggcatctcctgaaa
tacgaggccatctaccctgagacagccgcgattcttggctattgtaggggagaagcagtc
tactccagggattgtgtgcataccctgcactcccgggacacgtggctgaaacaggcaaga
gtggtgaggctgggagaagtgccctacaagatggtgaaaggctactccaaccgggcccgg
aaagcccgcctcgccgagccgcagctgcaggaccacaacgatctgggcctgtttggcgag
tggcagacagaggagtaccagccgcccgtggctgtggacggcaaggtcccccggaatgag
tttgggaacgtgtacctcttcctgcccagcatgatgcctgtcggctgcgtccagctcaac
ctgcccaacctgcaccgcgtggcccgcaagctggacattgactgtgtccaggccatcact
ggcttcgatttccataaaggctactcccatcccataaccgacgggtacattgtctgcgag
gaatacaaagacgtgctcctggccgcctgggagaatgagcaggcgctcattgagaagcgg
gagaaggagaaaagagagaagcgggccctggggaactggaagctgctggcccggggactg
ctcatccgggagaggctgaagcttcgctatggggacaagagtgaggcaggagctccccaa
gcacctgccggagatggactctcttctgatgaagaggagggaaccagctctcaagcagaa
gcatcgaggatcctggctgcctcctggccccaaaaccgagaggctgaagaagagcagaag
ctaaagtgccctaagaagaccaaaagggagaaggcggctgcggcctcccacctgttcccc
tttgagaggctgtga
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