Zalophus californianus (California sea lion): 113916280
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Entry
113916280 CDS
T07874
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A isoform X1
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zca03041
]
113916280 (DDX39A)
Enzymes [BR:
zca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113916280 (DDX39A)
Spliceosome [BR:
zca03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113916280 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113916280
NCBI-ProteinID:
XP_027438115
UniProt:
A0A6J2C1Q3
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All DBs
Position
1:complement(10086897..10095089)
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AA seq
434 aa
AA seq
DB search
MTRNVSTMAEQDVENELLDYEEDEEPQAPPESTPAPPKKDVKGSYVSIHSSGFRDFLLKP
ELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQV
TVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPG
RILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKE
IRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFV
KSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIE
RVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAEL
PEEIDISTYIEQSR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggaatgtgagcaccatggcggaacaggacgtggaaaatgagcttctggattat
gaggaagatgaagagccccaggctcctccagagagcactcctgctccccccaagaaagac
gtcaagggttcctatgtttccatccacagctctggcttccgggactttctgctaaagcca
gagctcctgagggccatagtggactgtggctttgagcatccatctgaggtccagcacgag
tgtattccccaagccatcctgggcatggatgtcctgtgccaggccaagtctgggatgggc
aagacggcagtcttcgtgctggctaccctgcagcagatcgagccagtcaacggacaggtg
acagtcctggtcatgtgccatacgcgggagctcgccttccagatcagcaaagagtacgaa
cgcttctccaagtacatgcccagtgtcaaggtgtccgtgttctttgggggcctttccatc
aagaaggatgaagaggtattgaagaagaactgtccccatgtcgtagtggggacaccaggg
cggatcctggcactagtgcggaacaggagcctgaacctgaagaacgtgaagcacttcgtg
ctggatgagtgtgacaagatgctggagcagctggacatgcggcgggatgtgcaggagatc
ttccgtctgacaccccatgagaagcagtgcatgatgttcagcgccaccctgagcaaggag
atcaggcctgtctgcaggaagttcatgcaagaccccatggaggtgtttgtagacgatgag
accaagctcacactgcacggactgcaacagtactacgtcaagcttaaggacagtgagaag
aaccgcaagctctttgatctcttggatgtgttggagtttaaccaggtggtgatctttgtg
aagtcagtgcagcgctgcatggccctggcccagctcctcgtggagcagaacttcccagcc
atcgctatccacaggggcatggcccaggaggagcgtctgtcacgttatcagcagtttaaa
gacttccagcggcggatcctggtggccaccaatctgtttggccgagggatggacattgag
cgagtcaacattgtcttcaactatgacatgcccgaggactcggacacctacctccaccga
gtggcccgtgcaggtcgctttgggaccaaaggtctggctatcacttttgtatctgacgag
aacgatgccaaaatcctcaatgacgttcaggacaggtttgaagtgaacgtggcagaactt
cctgaagaaatcgacatttccacatacattgagcagagccggtaa
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