Zalophus californianus (California sea lion): 113916461
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Entry
113916461 CDS
T07874
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42 isoform X1
KO
K12589
exosome complex component RRP42
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113916461 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113916461 (EXOSC7)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113916461 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
113916461 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113916461
NCBI-ProteinID:
XP_027438638
UniProt:
A0A6J2C9D4
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Position
1:15052452..15088349
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AA seq
343 aa
AA seq
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MASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRYVEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDWCLALGYVEEGLGLSPALVLVTRSVLGLTVPVGERR
ASPGSPAHDGSKSQMKCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLQSLCISP
REHCWILYVDVLLLECGGNLFDTICIAVKAALFNTRIPRVRVLEDEEGSKDIELSDDPYD
CIRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSTGVVTCMRKVGKGSLD
PESIFEMMETGKRVGKVLHASLQSVLHKEESLGPKRQKVGFLG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggcgctgagtgaggcggagaaggtgtatatcgtgcacggcgttcaggaa
gacctccgtgtggatggccgtggctgtgaggactaccgatatgtcgaagtggaaaccgat
gtggtgtctaacaccagtgggtctgccagggtcaagctgggtcacacagacatcttggtg
ggagtgaaagcagaaatggggacaccgaagctggagaaaccaaatgaaggttacttggag
ttcttcgttgactggtgcctggcactgggatatgtggaagaaggccttggcttgagtcct
gcccttgtcctagtcacgcggtcagtgctgggcctcactgtccctgtcggagagaggagg
gcatcgccaggcagcccggcacatgatggttctaagagtcaaatgaaatgttcagccaat
gctacccctgaatttgaaggtcgaggaggtgatgaccttggcacggagattgctaatacc
ctctaccggatatttaacaacaagagcagcgtcgacctccagtccctctgcattagtccc
cgggagcattgttggatcctctatgtggacgtgctgctgctggaatgcggtgggaatttg
tttgacaccatctgcattgctgtgaaagctgccctcttcaacaccaggataccgagagtt
cgtgttctagaggatgaagaggggtccaaggacattgaactctcagatgacccttatgac
tgcatccggctaagcgtggagaatgtcccctgcattgtcaccctgtgcaagattggctat
cggcatgtcgtggatgctactcttcaggaggaggcctgctccttggccagcttgctggtg
tccgtgaccagcacgggagtcgtgacgtgcatgaggaaagtggggaagggcagcctggac
ccagagagcatcttcgagatgatggagacgggcaagcgagtgggcaaggtgctgcacgcc
tccctgcagagcgtcctacacaaggaggaaagcctggggcccaagagacagaaagtcggc
ttcctgggatga
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