Zalophus californianus (California sea lion): 113916465
Help
Entry
113916465 CDS
T07874
Symbol
SCN5A
Name
(RefSeq) sodium channel protein type 5 subunit alpha isoform X1
KO
K04838
voltage-gated sodium channel type V alpha
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04261
Adrenergic signaling in cardiomyocytes
zca04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
113916465 (SCN5A)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
113916465 (SCN5A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zca04040
]
113916465 (SCN5A)
Ion channels [BR:
zca04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
113916465 (SCN5A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
CcmD_alt
FraC
Motif
Other DBs
NCBI-GeneID:
113916465
NCBI-ProteinID:
XP_027438656
UniProt:
A0A6J2C5C8
LinkDB
All DBs
Position
1:complement(67119745..67218328)
Genome browser
AA seq
2017 aa
AA seq
DB search
MADFLLPRGTSSFRRFTRESLAAIEKRMAEKQARGSAASQESREGLPEEEAPRPQLDLQA
SKKLPDLYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYVLSPFHPV
RRAAVKILVHSLFSMLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARG
FCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIV
GALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTALNDTNGSVEANGLV
WESLDRYLSDPGNYLLKNGTSDVLLCGNSSDAGTCPEGYRCLKAGDNPDHGYTSFDSFAW
AFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQN
QATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVTTHERRSKRRK
RMSLGTEECGDDRFPKSDSEDGPRAMNRLSSTHGLSRTSMKPRSSRGSIFTFRRRDLGSE
TDFADDENSTAGDSESHRTSLLVPWPLRRPSAQGQLSPGTSAPRHTLNGKRNSTVDCNGV
VSLLGAGDPEATSPGSHLLRPVILDRPPDTTTPSEEPGRPQILNAQAPCMDGFEEPGERQ
RALSAVSVLTSALEELEESHRKCPPCWNRFAQRYLIWECCPLWISIKQRVKFMVMDPFAD
LTITMCIVLNTLFMALEHYNMTTEFEEMLQVGNLVFTGIFTAEMTFKIIALDPYYYFQEG
WNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKNYSEQRYRISDSGLLPRWHMMDFFHAFLIIFRILCGE
WIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDDDGEMNN
LQLALARIQRGLRFLKRTTWDFCCALLQRRPQKPAALAAHGQLPSCVATSSPPLPPESEK
APLARKETRFEEDKRPGQGTPRDTEPVCVPIAVAESDTDDQEEDEENSLGTEEESSKQQE
SQPVSGSPEALPEPRAWSQVSETASSEASVAQADWRQRRKAEPLAPGCSETHEDSCSEGS
TADMTNTADLLEQIPDLGEDVKDPENCFTEGCVRRCPCCAVDTTQGPGKVWWRLRKTCYR
IVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLKWVA
YGFKKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGM
RVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTIVNN
KSDCESFNVTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGYEEQPQW
EYNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKK
LGSKKPQKPIPRPLNKYQGFLFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKVNIL
AKINLLFVAIFTGECIIKMAALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPT
LFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA
YVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLPNSNGSRG
NCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYEIWEK
FDPEATQFIEYSALSDFADALSEPLRIAKPNQISLINMDLPMVSGDRIHCMDILFAFTKR
VLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSATVIQRAFRRHLLQRS
MKHASFLFRQQAGSSGLSDEDAPEQEGLIAYMMNENFSRRLGPPSSSSVSSTSFPPSYDS
ITRATSDNPQVQVSDYSRSEDLADFPPSPDRDRESIV
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcctgttacctcggggcaccagcagcttccgcaggttcacccgggagtcc
ctggcggccatcgagaagcgcatggcggagaagcaagcccgaggctcggccgcctcacag
gagagccgggaagggctgcccgaggaggaggctccccggccccagctggacctgcaggcc
tccaaaaagctgccagatctctatggcaacccaccccgagagctcatcggggagcccctg
gaggacctggaccccttctatagcacccaaaagaccttcatcgtgctgaataaaggcaag
accatcttccggttcagtgccaccaatgccttgtatgtcctcagtcccttccaccctgtc
cggagagcagctgtgaagattctggttcattcgctgttcagtatgctcatcatgtgcacc
atcctgaccaactgcgtgttcatggcccagcacgaccctccaccctggaccaagtatgtc
gagtacaccttcactgccatttacacctttgagtctctggtcaagattctggctcgaggc
ttctgcctgcatgcgttcaccttcctccgggacccatggaactggctggacttcagtgtg
attgtcatggcatacacaactgaatttgtggacctgggcaatgtctcagctttacgtacc
ttccgagtcctccgggccctgaaaactatatcagtcatttcaggtctgaagaccatcgtg
ggggccctgatccagtctgtgaagaagctggccgatgtgatggtcctcacggtcttctgc
ctcagcgtctttgccctcatcggcctgcagctcttcatgggcaacctgaggcacaagtgt
gtccgcaacttcacggcgctcaacgacaccaatggctctgtggaggccaacggcctggtc
tgggagtccctggaccgctacctcagcgacccaggaaattacttgctgaagaacggcacc
tccgatgtgttactgtgtgggaacagctctgatgccgggacatgtcccgagggttaccgg
tgcctaaaggcaggggacaaccctgatcacggctacaccagcttcgactccttcgcctgg
gccttccttgcgctcttccgcctaatgacgcaggactgctgggagcgcctctaccagcag
accctgaggtctgcagggaagatctacatgatcttcttcatgcttgtcatcttcctgggc
tccttctacctggtgaacctgatcctggctgtggttgccatggcctacgaggagcaaaac
caagccaccatcgctgagaccgaagagaaggaaaagcgcttccaggaggccatggagatg
ctcaagaaagagcatgaggccctcaccatcaggggtgtggacacagtgtcccgcagctcc
ttggagatgtcccctttggccccagtaaccacccatgagagaagaagcaagaggagaaaa
cgaatgtctttggggacagaggagtgtggagatgacaggttccccaagtccgactcagag
gatggtcccagagcaatgaatcgtctgagcagcacgcacggcctcagccggacctccatg
aagccccgctccagccgcgggagcattttcacctttcgcaggcgggacctgggctcagag
acagattttgcagatgacgaaaacagtacagcgggggacagcgagagccaccgcacgtca
ctgctggtgccctggcctctgcgccggcccagtgcccagggacagctcagtccagggacc
tcggctccccgccacaccctcaacggtaaaagaaacagcaccgtggactgcaacggggtg
gtctccttgctgggggcgggcgaccctgaggccacctccccagggagccacctcctccgc
cctgtgatcctggatcgccccccagacacgaccacaccgtcggaggagccgggcaggccc
cagatcctgaacgcccaggctccatgtatggatggcttcgaggagccaggagagcggcag
cgggccctcagtgccgtcagtgtgctcaccagcgccctggaagagttggaagagtctcac
cgcaaatgtccgccatgctggaaccgctttgcccagcgctacctgatctgggagtgctgc
ccgctgtggatatccatcaagcagagagtgaagttcatggtcatggacccattcgccgac
ctcaccatcaccatgtgcatcgtgcttaacacactcttcatggcactggagcactacaac
atgacaactgaattcgaggagatgctgcaggttggaaacctggtcttcacggggatcttc
accgcagagatgaccttcaagatcatcgctctggacccctactactacttccaggagggc
tggaacatcttcgacagcatcattgtcatcctgagcctcatggagctgggcctgtcccgc
atgggcaacctatcagtgctgcgctccttccgcctgctgcgggtctttaagctggccaaa
tcatggcccaccctgaacaccctcatcaagatcatcggaaactcagtgggggcgctgggg
aacctgacgctggtgctggccatcatcgtgttcatcttcgctgtggtgggcatgcagctc
tttggcaagaactactcagagcagaggtaccgcatcagtgactcaggcctgctgccccgc
tggcacatgatggacttcttccatgcctttctcatcatcttccgaatcctctgtggggag
tggatcgagaccatgtgggactgcatggaggtgtccgggcagtcactgtgcctgcttgtc
ttcttgctcgttatggtcattggcaaccttgtggtcctgaacctcttcctggctctgctg
ctcagctccttcagcgcagacaacctcacagcccctgacgatgatggagagatgaacaac
ctccagctggccctggcacgcatccagcgcggcctgcgcttcctcaagcggaccacctgg
gacttctgctgtgcgctcctacagcggcggccccagaagcccgcagcccttgccgcccat
ggccaactgcccagctgtgttgccacctccagccccccactgcccccggagtcagagaag
gcgcctctggcccgcaaggagacacggtttgaggaagacaagcgaccaggccagggcacc
cccagggatacagagcctgtgtgtgtgcccattgccgtggctgagtcagacacggatgac
caagaggaagatgaggagaacagcctgggcacagaggaagagtccagtaagcagcaggaa
tcgcagcctgtttccggcagcccagaggccctcccagagcccagggcctggagccaggtg
tcagagaccgcctcctccgaggccagtgtggctcaggcagactggcggcagcggcggaaa
gcggagcccctggccccagggtgcagtgagactcacgaggacagctgctcggaggggagc
acagctgacatgaccaacactgctgacctcctggagcagatccctgacctgggcgaggat
gtcaaggacccagagaactgcttcactgaaggttgtgtccggcgctgtccctgctgtgcc
gtggacaccacgcagggccccgggaaggtctggtggcgactgcgcaagacctgctaccgc
atcgtggagcacagctggttcgagacgttcatcatcttcatgatcctgctcagcagtgga
gccctggccttcgaggacatctacctggaggagcggaagaccatcaaggttctgctcgaa
tatgccgacaagatgttcacctacgtcttcgtgctggagatgctgctcaagtgggtggcc
tacggctttaagaagtacttcaccaatgcctggtgctggctggacttcctcatcgtggat
gtctccctgatcagcctggtagccaacaccctgggctttgccgagatgggccccatcaag
tcactgaggaccttgcgtgcactccgacccctgagagccctgtcacgatttgagggcatg
agggttgtggtcaatgccctggtgggtgccatcccatccatcatgaatgtcctcctggtc
tgcctcatcttctggctcatcttcagcatcatgggcgtgaacctctttgcggggaagttt
gggcggtgcatcaaccagactgagggagacctgcctttgaactacaccatcgtgaacaac
aagagtgactgtgagtctttcaacgtgactggcgagttgtactggaccaaggtgaaagtc
aactttgacaacgtgggggccgggtacctggcccttctgcaggtggcaacatttaaaggc
tggatggacattatgtatgcagctgtggactccagggggtatgaagagcagccccagtgg
gaatacaacctctacatgtacatctacttcgtcattttcatcatcttcgggtctttcttc
accctgaaccttttcatcggcgtcatcatcgacaacttcaaccaacagaagaaaaagtta
gggggccaggacatcttcatgaccgaggagcagaagaagtactacaacgccatgaagaag
ctgggctccaagaagccccagaagcccatcccgaggcctctgaacaagtaccagggcttc
ctgttcgacattgtgaccaagcaggccttcgacgtcaccatcatgtttctcatctgcttg
aacatggtgaccatgatggtggagacagatgaccagagccctgagaaggtcaacatcttg
gccaagatcaacctgctcttcgtagccatcttcacgggcgagtgtatcatcaagatggct
gccctgcgccactattacttcaccaacagctggaacatctttgactttgtggttgtcatc
ctctccattgtgggtactgtgctctcagacatcatccagaagtacttcttctccccgacg
ctcttccgagtcatccgcctggcccgaatcggccgcatcctcaggctgatccgaggggcc
aagggaatccgcacactgctctttgccctcatgatgtccctgcccgccctcttcaacata
ggactgctgctcttcctcgtcatgttcatctactccatcttcggcatggccaacttcgct
tacgtcaaatgggaggctggcatcgacgacatgttcaacttccagacctttgccaacagc
atgctgtgcctcttccagatcaccacatcagccggctgggatggcctcctcagccccatc
ctcaacacaggacccccttactgcgaccccaatctgcccaacagcaatggctcccggggg
aactgtgggagcccagccgtgggcatcctcttcttcaccacgtacatcatcatctccttc
ctcatcgtggtcaacatgtacatcgccatcatcctggagaacttcagcgtggccacagag
gagagcaccgagcctctgagcgaggatgacttcgacatgttctacgagatctgggagaag
ttcgacccggaggccacccagttcatcgagtattcggccctgtccgacttcgccgacgcc
ctgtccgagccgctccgcatcgccaagcccaaccagataagtctcatcaatatggacctg
cccatggtgagtggggaccgtatccactgcatggacatcctctttgccttcaccaagagg
gtcctgggtgagtctggggagatggatgccctgaagatccagatggaggagaaattcatg
gcggccaacccgtccaagatctcctatgagcccatcaccaccacgctccggcgcaagcac
gaggaggtgtcggccactgtcatccagcgggccttccggaggcacctgctgcagcgctcc
atgaagcacgcctccttcctcttccgccagcaggcgggcagcagcggcctctctgatgag
gatgcccccgagcaggagggtctcatcgcctacatgatgaatgagaacttctccaggcgc
cttggcccgccctccagctcctctgtctcctccacgtccttcccgccctcctatgacagc
atcaccagggcaaccagcgataacccccaggtgcaggtgtccgactacagccgcagtgag
gatctcgccgacttccccccgtccccagacagggaccgcgagtccatcgtgtga
DBGET
integrated database retrieval system
