Zalophus californianus (California sea lion): 113916687
Help
Entry
113916687 CDS
T07874
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113916687 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113916687 (DHX36)
03012 Translation factors [BR:
zca03012
]
113916687 (DHX36)
Enzymes [BR:
zca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113916687 (DHX36)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113916687 (DHX36)
Translation factors [BR:
zca03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113916687 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NPHP3_N
DUF6782
AAA_34
RsgA_GTPase
ResIII
AAA_23
NACHT
Motif
Other DBs
NCBI-GeneID:
113916687
NCBI-ProteinID:
XP_027439248
UniProt:
A0A6J2CB81
LinkDB
All DBs
Position
1:complement(108604436..108653605)
Genome browser
AA seq
1015 aa
AA seq
DB search
MSYDYHQNWGRDGGPRSSGGGYGGSYGGGHGGGHGGNRGSGGGGGGGGGGGGGGRGGRGR
HPGHLKGREIGLWYAKKQGQKNKEAERQERAIVHMDERREEQIVQLLHSVQAKNGKDSEA
QISWFAPEDHGYGTETPAENKPNSEKKLENQEKKLISQEKRTFRIRDKYIDRDSEYLLQE
NEPDVTLDQQLLEDLQKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETG
CGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQ
IRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDL
LNFRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKE
HRSQFKRGFMQGHVNRQEKEEKEAIYKERWPDYVRELRKRYSASTVDVLEMVDDDKVDLN
LIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQ
TQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK
ANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAY
FLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFC
CLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRG
FRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKA
VICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMR
TSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAYLVKELRKEL
DILLQEKIESPHPVDWKDTKSRDCAVLSAIIDLIKTQEKASPRNFPPRFQDGYYS
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgattaccatcagaactggggccgggatggcgggccccgcagctctggcggg
ggttacggaggaagctatggggggggccatggaggaggccatggagggaaccgaggctcc
ggaggcggcggcggcggcggcggcggtggcggaggaggtggtcgaggcggccgcggccga
catcccgggcacctgaaaggccgcgaaatcggcttgtggtatgcgaagaaacagggacag
aagaacaaggaagcggagaggcaggagagagctatagtacacatggatgaacggcgagaa
gaacagattgtgcagctgcttcattcagtccaagcgaagaatggtaaagactcagaagca
cagatctcctggtttgctcctgaagatcacggatatggtactgaaactcctgctgagaac
aaacccaactcagagaagaaacttgagaaccaggaaaagaaattaataagtcaagaaaag
agaacatttagaatcagggacaaatatattgaccgagattctgaatatctcttgcaagaa
aatgaaccagatgtaaccttagaccaacaactattggaagatttacaaaagaaaaaaagc
gaccttcggtatattgaaatgcagcatttcagggaaaagctgccttcatatggaatgcaa
aaggaattggtaaatatgattgataaccatcaagtaacagtaataagtggtgaaactgga
tgtggaaaaactactcaagttactcagttcattttggataactatattgaaagaggaaaa
ggatctgcatgcaggatagtttgtactcagccaagaagaattagtgccatttcagttgca
gagagggtggctgcagaaagggcagaatcttgtggcaatggtaacagtactggataccag
attcgtctccagagtcggttgccaaggaagcagggttctatcttatactgtacaacagga
atcatcctgcagtggctccagtcagactcgcatttgtccagtgttagtcatattgtgctt
gatgaaatccatgagagaaatctacagtcagatgttttaatgacggttattaaagatctt
ctcaattttcgacctgacctgaaagtaatattgatgagtgcgactttaaatgctgagaaa
ttttcagaatattttggtaactgtccaatgatacacatacctggttttacttttccggtt
gtggagtatcttttggaagacataattgaaaaaataagatatgttccagaacaaaaagaa
cacaggtcccagtttaagaggggtttcatgcaagggcatgtaaatagacaagaaaaagaa
gaaaaagaagcaatctataaagaacgctggccagattatgtaagggaactgcgcaaaagg
tattctgcaagtactgtagatgttctggaaatggtggatgatgataaagttgatctgaat
ttgattgctgcccttatccgacacattgttttggaagaagaggatggtgcgatattggtc
tttctaccaggctgggacaatatcagcactttacatgatctcttgatgtcacaagtgatg
tttaaatcagacaggtttcttattatacccctacattcactgatgcctacagttaaccag
acacaggtatttaaaagaacccctcctggtgttcggaaaatagtaattgcaacgaatatt
gcagagactagcattaccatagatgatgtagtttatgtgatagatggaggaaaaataaaa
gaaacacactttgacacacagaataacatcagtacaatgtctgccgagtgggttagtaaa
gctaatgccaaacaaaggaaaggtcgagctggaagagttcaaccaggtcattgctatcat
ctgtataatggtcttagagcaagccttctggatgactatcaactgccagaaattttgaga
actcctttggaagaactttgtttacagataaagattttaaggctaggtggaattgcttat
tttctgagtaggttaatggatccaccatcagatgaagcagtgtcactctccataaaacac
ctgatggaactgaatgctttggataaacaagaagaattgacaccccttggagtccattta
gcacgattaccagttgagccacacattgggaaaatgattcttttcggagctctgttctgt
tgtttagatccagtactcaccattgctgctagtctcagcttcaaagatccctttgtcatt
ccactgggcaaagaaaagattgcagatgcaagaagaaaagaattggcaaaagacactaaa
agtgatcacctgacagttgtaaatgcatttgagggctgggaagaagctaggcgacgtggt
ttcagatatgaaaaagactattgctgggaatattttttgtcttcaaacacattgcagatg
ctgcataacatgaaaggacaatttgctgagcatcttcttggagctggatttgtaagcagt
agaaatcctaaagatccaaaatctaatataaattcagataatgagaagataattaaagcc
gttatctgtgctggtttatatcccaaagttgctaaaatccgactaaatttgggtaaaaaa
agaaaaatggtcaaagtttacacaaaaactgatggactagttgctattcatcctaaatct
gttaatgtggagcaaacagaatttcattacaactggcttatctatcatctgaagatgaga
acaagtagtatatacctatatgactgcacagaagtttctccatactgtctcttattcttt
ggaggtgatatttccatccagaaggataacgatcaggagactattgctgtagatgaatgg
attgtctttcagtctccagcaagaattgcctatcttgttaaggaattaagaaaggagcta
gatatccttctgcaagagaagatcgaaagtccccatcctgtagattggaaagacactaaa
tccagagactgtgctgtactgtcagctattatagacttgatcaaaacacaggaaaaagca
agtcccaggaactttccaccacgattccaggatggatattacagctga
DBGET
integrated database retrieval system
