Zalophus californianus (California sea lion): 113916802
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Entry
113916802 CDS
T07874
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03030
DNA replication
zca03410
Base excision repair
zca03420
Nucleotide excision repair
zca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113916802 (RFC4)
03410 Base excision repair
113916802 (RFC4)
03420 Nucleotide excision repair
113916802 (RFC4)
03430 Mismatch repair
113916802 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zca03032
]
113916802 (RFC4)
03036 Chromosome and associated proteins [BR:
zca03036
]
113916802 (RFC4)
03400 DNA repair and recombination proteins [BR:
zca03400
]
113916802 (RFC4)
DNA replication proteins [BR:
zca03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113916802 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
113916802 (RFC4)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
113916802 (RFC4)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113916802 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
113916802 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
DUF815
AAA_16
AAA_22
AAA_30
AAA_11
AAA_24
Mg_chelatase
RuvB_N
AAA_28
SLFN-g3_helicase
AAA_19
AAA_5
ResIII
AAA_7
Motif
Other DBs
NCBI-GeneID:
113916802
NCBI-ProteinID:
XP_027439587
UniProt:
A0A6J2CAC5
LinkDB
All DBs
Position
1:complement(137145229..137174512)
Genome browser
AA seq
463 aa
AA seq
DB search
MSTWTQSSLKLSSLGTKDTAAGSSRQPAQHSGAPSKLRLLPGSVEPSGTWPPRPQWQIGT
TLDPPHSLASLPAQILNGQTICVLVPSRFHSHLKTKGEVTMQAFLKGTSVSTKPSLKDRG
VAATAGSSGENKKTKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPG
TGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPC
PPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKP
LSDKIQQQRLLDIADKEHVRISNEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKV
ITDIAGVMPAETIDGIFAACQSGSFDKLEAVVKDLIDEGHAATQLVNQFHDVVVENDNLS
DKQKSIITEKLAEVDKCLADGADEHLQLISLCATVMQQLTQNC
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatggacccaatcctccctgaaactgagcagcctcggcactaaggacactgcg
gcgggttcgagcagacagcccgcgcaacactccggggccccaagcaagctccggctcctg
ccgggctcggtagagccctccgggacgtggcctccacggcctcaatggcagatcggaacc
accctggatcctcctcattccttggcatctcttcctgcacaaattttaaatggtcaaact
atttgtgttttggttccttccagatttcattctcatctcaagacaaagggtgaagtaacc
atgcaggcttttctaaaaggcacatctgtcagtactaaaccgtcactgaaggatcgagga
gtagctgccacagctggaagcagtggagagaacaagaaaaccaaacctgttccatgggtg
gaaaaatatcgtccaaaatgtgtggatgaagttgctttccaggaagaagtagttgcagtg
ctgaaaaagtctttagaaggagctgatctccctaatctcttgttttatgggccacctgga
actggaaaaacatccaccattttggcagcagctagggagctttttgggcctgaacttttt
cgattaagggttcttgagttaaatgcatccgatgaacgtggaatacaagtagttagagaa
aaagtgaagaattttgctcaattaactgtgtcaggaagtcgttcagatgggaagccatgt
cctccttttaagattgtgattctggatgaggcagattctatgacctcagctgctcaggca
gctttacgacgtaccatggagaaggagtctaaaaccacgcgattctgtctcatctgtaac
tatgtcagtcgaataattgaacctctgacgtctagatgttctaaattccgattcaaacca
ctgtcagataaaattcaacagcagcgattactagacattgctgataaagaacatgtgaga
attagcaatgagggaatagcttatcttgttaaagtgtcagaaggagatttaagaaaagcc
attacatttcttcaaagtgctacccgattaacaggtggaaaggagatcacagagaaggtg
atcacagacattgctggggtaatgccagctgagactattgatggaatatttgctgcgtgt
cagagtggctcttttgataaactagaagctgtggtaaaagacttaattgatgagggccat
gcagcaactcagcttgttaatcaatttcatgatgtggttgtagaaaatgataacctttct
gataaacagaaatccattatcacagaaaaacttgctgaagtagataaatgcttagcagat
ggtgctgatgaacatctacaactcatcagcctctgtgcgacggtgatgcagcagttaact
cagaattgctga
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