Zalophus californianus (California sea lion): 113916819
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Entry
113916819 CDS
T07874
Symbol
FXR1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113916819 (FXR1)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113916819 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
113916819 (FXR1)
mRNA cycle factors
Stress granule specific factors
113916819 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
FXR_C3
Tudor_FRX1
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
113916819
NCBI-ProteinID:
XP_027439664
UniProt:
A0A6J2C6N1
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All DBs
Position
1:131908402..131966202
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AA seq
710 aa
AA seq
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MESIDVASILEKSSPLLSPGFSCKNFHPLCKFWCWCFLDFIRRCQQNNLLGFIKDVHEDS
LTVVFENNWQPERQVPFNEVRLPPPPDIKKEISEGDEVEVYSRANDQEPCGWWLAKVRMM
KGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKCTVDVPEDLREACANENAH
KDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATK
HLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGE
SADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENKLP
REDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGMGFRPSST
RGPEKEKGYATDESTVSSVQGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDE
LSDWSLAGEDDRESRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYS
LLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLDDSE
KKPQRRNRSRRRRFRGQAEDRQPVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIE
EHGPSEKAINGPTSASGDEISKLQRTPGEEKINTLKEENTQEAAVLNGVS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggagagcattgatgttgcaagcatacttgaaaagagctctcctctattatctccagga
ttttcttgcaagaattttcatccactctgcaagttttggtgctggtgctttcttgatttt
atcagaaggtgtcaacagaacaaccttctgggatttatcaaagatgttcatgaagactcc
ctcacagttgtttttgagaacaactggcagccagaacgccaggttccatttaatgaagtt
agattaccaccaccacctgacataaaaaaagaaattagtgaaggagatgaagtagaggta
tattcaagagcaaatgaccaagaaccatgtggatggtggttggctaaagttcgaatgatg
aaaggagaattttatgtcattgaatatgctgcttgtgatgccacttacaatgaaatagtc
acatttgaacgacttcgacctgtcaatcaaaataaaactgtcaaaaaaaataccttcttt
aaatgcacagtggatgttcctgaggatttgagagaggcgtgtgctaatgaaaatgcacat
aaagattttaagaaagcagtaggagcatgcagaattttttaccatccagaaaccacacag
ctaatgatactgtctgccagcgaagcaactgtgaagagagtaaatattttaagtgacatg
catttgcgaagtattcgtacgaaattgatgcttatgtccagaaatgaagaggccactaag
catttagaatgcacaaaacaacttgcagcagcttttcatgaggaatttgttgtgagagaa
gatttgatgggcctggcaataggaacacatggtagtaacatacagcaagctaggaaggtt
cctggagttacagctattgagctagatgaagatactggaacatttagaatctatggagag
agtgctgatgctgtaaaaaaggctagaggtttcttggaatttgtggaggattttattcag
gttcctaggaatcttgttggaaaagtaattggaaaaaatggcaaagtcattcaggaaata
gtggacaaatctggtgtggttcgggtgagaattgaaggagacaatgaaaataaactacct
agagaagatggtatggttccatttgtatttgttggcactaaagaaagcatcggaaatgtg
caagttcttttagagtatcatattgcttacctaaaggaagtagaacagctaagaatggaa
cgcctacagattgatgaacagctacgacagattggtatgggtttcagaccttcttccacc
agagggcctgaaaaagaaaaaggatatgccactgatgaaagtaccgtctcttctgtacaa
ggttctaggtcttatagtggaagaggcagaggtcgtcggggccctaattacacctccggt
tatggtacaaactctgagctgtctaacccctctgaaacagaatctgagcgtaaagacgag
ctgagtgattggtcattggcaggagaagatgatcgggagagccgacatcagcgtgacagc
aggagacgcccaggaggaagagggagaagtgtttcagggggtcgaggtcgtggtggaccg
cgtggtggcaaatcctccatcagttctgtgctcaaagatccagacagcaatccatacagc
ttacttgataatacagaatctgatcagactgcagacactgatgccagcgaatctcatcac
agtactaaccgtcgtaggcggtctcgtagacgaaggactgatgaagatgctgttctgatg
gatgggatgactgaatctgatacagcttcagttaatgaaaatgggctagatgatagtgaa
aaaaaaccccagcgacgcaatcgtagccgcaggcgtcgtttcaggggtcaggcagaagat
agacagccagtcacagttgcagattatatttctagagctgagtctcagagcagacaaaga
aacctcccaagggaaactttggctaaaaacaagaaagaaatggcaaaagatgtgattgaa
gagcatggtccttcagaaaaggcaataaatggcccaactagtgcttctggcgatgaaatt
tctaagctacagcgtactccaggagaagaaaagattaataccttaaaagaagaaaacact
caagaagcagcagtcctgaatggtgtttcataa
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