Zalophus californianus (California sea lion): 113916821
Help
Entry
113916821 CDS
T07874
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04390
Hippo signaling pathway
zca04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
113916821 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
113916821 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zca03000
]
113916821 (SOX2)
Transcription factors [BR:
zca03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113916821 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113916821
NCBI-ProteinID:
XP_027439672
UniProt:
A0A6J2CAK4
LinkDB
All DBs
Position
1:132653409..132660344
Genome browser
AA seq
321 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKT
KTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQD
QLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMA
LGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQ
HYQSGPVPGTAINGTLPLSHM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaagaac
agcccggaccgcgtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcgg
cgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggc
gccgagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaagcgg
ctgcgtgcgctacacatgaaggagcacccggattataaataccggccccggcggaaaacc
aagacgctcatgaagaaggataagtacacgctgcccggcgggctgctggccccgggcggc
aacagcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccagcgc
atggacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggac
cagctgggctacccgcagcacccgggcctcaacgcacacggcgccgcgcagatgcagccc
atgcaccgctacgacgtgagcgcactgcagtacaactccatgaccagctcgcagacctac
atgaacggctcgcccacctacagcatgtcctactcgcagcagggcacccctggcatggcg
cttggctccatgggctcggtggtcaagtccgaggccagctccagcccccccgtggttacc
tcttcctctcactccagggcgccctgccaggccggggacctccgggacatgatcagcatg
tacctccccggggccgaggtgccggagcccgccgcccccagcagacttcacatgtcccag
cactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcgcac
atgtga
DBGET
integrated database retrieval system
