Zalophus californianus (California sea lion): 113916888
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Entry
113916888 CDS
T07874
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113916888 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zca03400
]
113916888 (RAD54B)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113916888 (RAD54B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
113916888
NCBI-ProteinID:
XP_027439848
UniProt:
A0A6J2CCZ0
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All DBs
Position
4:complement(149703423..149785256)
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AA seq
911 aa
AA seq
DB search
MRRSAAPSQLQGNPFKKLKFIPPGRSNPSPNEENTKMSPDVKLFEVVASKNTFLQLQNNP
RICSSNLPTEGSAREINHGHNYSGKHCSEASVMATLDPPHTVHSAPKEITVPKGQEEEEP
DSQVKYFSVVWCKASKKKHKKWEGDAVLIVKGKSLILKDLEGKDIGRGIAYKFKELEKLE
EGHRVMIGGKEVEVMGIISPDDFNSGRCFQLGGGSPAISSSSEAAKKCFFNPFKSVCKPS
SKENRPNGFQDCKPRHDPHVPNSLVMSRPDSNQQWMFSKNRFPVVDVVIDPHLVYHLRPH
QKEGIVFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTL
IVTPGSLVNNWKKEFQKWLGSERIKIFPVDQDHKVEEFTKSPFYSVLIISYEMLLRSLDQ
IKNVKFDLLICDEGHRLKNSAIKTTTALISLSCEKRVILTGTPVQNDLQEFFALIDFVNP
GILGSLSSYRKIYEEPIIISRQPSASEEEKELGEKRAAELTCLTGLFILRRTQEVINKYL
PPKIENVVFCRPGPLQVELYRKLLNSQAVRFCLQGLLGSSPHLICIGALKKLCNHPCLLF
NSIKEKEYSSTWDGNEERSLYEGLVDVFPADYNPLMFTEEESGKLQVLLKLLAVIHELRP
TEKVVLVSNYTQTLNILQEVCKRHGYTYTRLDGQTPISQRQQIVDCFNSKYSSDFIFLLS
SKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIY
QRQISKQDLSEAVVDLTKTSEHIQFSVEELKNLFTLHESSHCVTHDLLDCECTRDKDGTG
GSLEKFPNSRNCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERIRENVSFF
FQNITNQSTAI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgagacgatctgcagcaccaagtcagttgcaggggaatcccttcaaaaaactaaaattt
ataccaccagggagaagtaatccaagtccaaatgaagagaatacaaagatgagtccagac
gtaaaattatttgaggttgttgcaagtaagaacaccttcctccagttacaaaataatccc
agaatatgcagttcaaatctgcctactgagggaagtgctagagaaattaatcatgggcat
aattacagtggaaaacactgttctgaagcatctgtaatggcaacgttagatccacctcat
acagttcactcagcccctaaagaaataacagtgcctaagggacaagaagaggaagaacct
gatagccaagttaaatatttcagtgttgtttggtgtaaggcttcaaagaaaaaacacaaa
aagtgggaaggtgatgctgttctcattgtaaagggaaagtcacttatattaaaggatttg
gaaggcaaagacattggaagaggcattgcatataaattcaaagagcttgaaaagcttgaa
gagggccacagagtgatgattggtggaaaagaagtagaagtcatgggtataatctctcca
gatgatttcaacagtggcagatgttttcagcttggaggaggaagccctgctatctcaagt
tcttctgaagctgccaagaagtgtttctttaaccccttcaaaagtgtttgtaaaccaagt
tcaaaggaaaatagaccgaatggtttccaagattgtaaaccacgtcatgacccacatgta
ccaaattctcttgtaatgtcacgacctgacagtaatcagcagtggatgttcagtaagaac
cgctttcctgttgtggatgtggtgatagatcctcatcttgtgtatcatctccgaccacat
cagaaagaaggaattgtattcctttatgaatgtgtaatgggaatgagagtgaatggaaga
tgtggagctattcttgctgatgaaatgggtttagggaaaacgctgcaatgtatttcactc
atctggactctacagtgtcagggaccctatggaggcaagccagtaataaagaagacgctt
attgtcacacctggaagcttggtgaataattggaagaaggaatttcaaaaatggctagga
agtgaaagaatcaagatatttcctgttgatcaggaccataaagtagaagaattcaccaaa
tctccattttattctgttcttatcatcagttatgaaatgttacttcgttctttggatcaa
attaagaatgtaaaatttgatcttctaatctgtgatgaggggcatcgtttgaagaacagt
gccattaagacaactacagccctaattagcctctcttgtgagaaaagagtaattctaact
ggtactccagttcagaatgatcttcaagaattttttgcattaattgattttgtaaatcca
ggaatattaggctctttgtcatcttacagaaaaatatatgaagaacccatcattatatca
agacagccttctgcttctgaggaagaaaaggagttaggagagaaaagagcagctgaactt
acttgcctcactggactctttatccttagaagaacccaagaagtcataaataaatatctt
ccacctaaaatagagaatgtagtcttttgccgaccaggaccgctacaggttgagctttat
cgaaagctgttgaattctcaggctgtcaggttctgccttcaagggttgttgggaagtagt
cctcatctaatatgtataggagctctgaaaaaactgtgcaaccacccctgtctgttgttc
aactctataaaggaaaaagaatacagctcaacttgggatggaaatgaagaaaggagtcta
tatgaaggcttggtagatgtgttccctgctgattacaaccctctcatgtttactgaggaa
gagtctggaaaactacaggtgctgttgaagctcttagcagttattcatgaacttcgtcct
actgaaaaggtggtgttagtatccaactacacacaaaccttgaatattctacaagaagta
tgcaagcgtcatggatatacttatacaagacttgatggacaaacaccgatctctcaaaga
cagcaaattgttgattgcttcaatagtaaatactcttctgattttatttttttgttaagt
tcaaaagctggtggtgtgggacttaaccttattggaggatctcacttaattctctatgac
attgattggaatccagccactgatatccaggcaatgtctagagtatggagagatggtcag
aaacatcctgtacatatttacaggctcctaaccacaggtacaatagaagaaaagatttat
caaagacagatcagtaagcaagatctttctgaggcagtcgtagacctaaccaagacatct
gaacatatccagttttcagtagaggagctaaaaaatttgttcacgttacatgaaagttca
cattgtgttactcatgacctgcttgactgtgaatgtacgagagacaaagatggtacaggt
ggttcactggaaaaattccctaactctagaaattgtcagcttggtccacatcaccagaag
tctaactctctgaaacctctctccatgtcacagctgaagcaatggaaacatttttctgga
gatcatttaaatcttacagatccttttcttgaaagaatcagagaaaatgtctcattcttt
tttcagaatataaccaatcaaagtaccgctatataa
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