Zalophus californianus (California sea lion): 113916933
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Entry
113916933 CDS
T07874
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04360
Axon guidance
zca04724
Glutamatergic synapse
zca04726
Serotonergic synapse
zca04929
GnRH secretion
zca04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
113916933 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
113916933 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
113916933 (TRPC1)
04726 Serotonergic synapse
113916933 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
113916933 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zca04040
]
113916933 (TRPC1)
Ion channels [BR:
zca04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113916933 (TRPC1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
113916933
NCBI-ProteinID:
XP_027440006
UniProt:
A0A6J2C9L2
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Position
1:98258295..98329256
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AA seq
793 aa
AA seq
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MMAALYPSTDLSGASSSSLPSSPSSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGD
YYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAID
SEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLL
KQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFE
LSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRG
LLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGI
FWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPA
LERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNK
FHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGK
FLGMFLLVLFSFTIGLTQLYDKGYTPKEQDCVGIFCEQQSNDTFHSFIGTCFALFWYIFS
LAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEW
KFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKEW
RNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLG
FRTSKYAMFYPRN
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggctctgtacccgagcacggatctctcgggcgcctcctcctcctcccttcct
tcctccccatcctcctcttcgtcgccgaacgaggtgatggcgctgaaggatgtgcgggag
gtgaaggaggagaacaccctgaatgagaagcttttcttgctggcgtgcgacaagggtgac
tattatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgc
gtagatgtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatata
ctgcagcttcttttggactacggttgtcagtccgcagatgcacttttggtggcaatcgac
tctgaagtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatcaaga
ccaactatagtaaaactaatggagcgaattcagaatcctgagtattcaacaactatggat
gttgcacctgtcattttagctgctcatcgtaacaactatgaaattcttacaatgctgtta
aaacaggatgtatctctacccaagccccatgcagttggctgtgaatgcacattgtgttct
gcaaagaacaaaaaggacagtctccgacattccaggtttcgtcttgatatatatcgctgt
ttggccagtccagctctaataatgttaacagaggaggatccaattctgagagcatttgaa
cttagtgctgatttaaaagaattaagccttgtggaggtggaattcaggaatgattatgag
gagctagcccgacaatgtaagatgtttgctaaagatttgcttgcacaagcccggaattca
cgagaattggaagttatcctaaaccatacatctagtgatgagcctcttgacaaacgggga
ttactagaagaaagaatgaatttaagtcgtctaaaacttgctatcaaatataaccaaaag
gagtttgtctcacagtctaactgccagcagttcctgaacactgtttggtttgggcagatg
tcaggttacagacgtaagcccacctgtaagaagataatgactgttttgacagttggcatc
ttttggccagttttgtcactttgttatttgatagctcccaaatctcagtttggcagaatc
attcacactccttttatgaaatttattattcatggagcatcatatttcacattcctgctg
ttattaaacctctactctcttgtctacaatgaggataagaaaaacacaatggggccagcg
cttgaaagaatagactatctacttatactgtggattattgggatgatttggtcagacatt
aaaagactctggtatgaagggttggaagactttttggaagaatcccgtaatcaactcagt
tttgtcatgaattcactttatttggcaacttttgccctcaaagtggttgctcacaacaag
tttcatgattttgctgaccggaaggactgggacgcattccatcctactctggtggcggaa
gggctttttgcatttgcaaatgttctaagttatcttcgtctcttttttatgtatacaaca
agctccatattgggtccattacagatttcaatgggacagatgttacaagattttggaaag
tttcttgggatgttccttcttgttttgttttctttcacaattggactgacacaactgtac
gataaaggctataccccaaaagaacaggactgtgtaggcatcttctgtgaacagcaaagc
aatgataccttccattcgttcattggcacttgctttgctttgttctggtatattttctcc
ttagcacatgtggcaatctttgtcacaagatttagttatggagaagaattgcagtccttt
gttggagctgttattgttgggacatacaatgttgtggttgtgatcgtgcttaccaagctg
ctggtggcaatgcttcataaaagcttccagttgatagcaaatcatgaagacaaagaatgg
aagttcgctcgagcaaagttatggcttagctactttgatgacaaatgtacattaccccca
cctttcaacatcattccttcaccaaagactatttgctatatgattagtagcctcagtaag
tggatttgctctcatacatcaaaaggcaaggttaaacggcaaaacagtttgaaggaatgg
agaaatctgaaacaaaagagggatgagaactaccaaaaagtgatgtgctgcttggtgcat
cgttacctgacgtccatgaggcagaagatgcaaagtacagatcaggcaaccgtggaaaac
ctaaatgaactacgccaggatctgtcaaaattccgaaatgaaataagggatttacttggc
tttcggacttctaaatatgctatgttttatccaagaaattaa
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