KEGG   Zalophus californianus (California sea lion): 113916981
Entry
113916981         CDS       T07874                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
zca  Zalophus californianus (California sea lion)
Pathway
zca03020  RNA polymerase
zca03420  Nucleotide excision repair
zca04623  Cytosolic DNA-sensing pathway
zca05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:zca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113916981 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    113916981 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    113916981 (POLR2E)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    113916981 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zca03021]
    113916981 (POLR2E)
   03400 DNA repair and recombination proteins [BR:zca03400]
    113916981 (POLR2E)
Transcription machinery [BR:zca03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     113916981 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     113916981 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     113916981 (POLR2E)
DNA repair and recombination proteins [BR:zca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113916981 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 113916981
NCBI-ProteinID: XP_027440138
UniProt: A0A6J2CDP1
LinkDB
Position
1:complement(590565..599661)
AA seq 346 aa
MEDLLRCPAASGGAGEPTADPARTSLGPLPIPNSLPRRALSRNHNSREAPRPRPRENCRG
ESGRFRLLGSRTAHRRPRKARAALGAAAPEEASGVRRSLSTALHGAVRGLGRGSAQAQSA
RVLPRAPARGGRAAAAMDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQF
GDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALI
VVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYK
LRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggaggacctgctacgttgcccggccgcctctgggggggcaggcgagccgaccgcagac
cccgcccgcacctcgcttgggcctctcccgattccaaactccctacccagacgggcgctg
agccgaaaccacaactcccgagaggccccgcggccgaggccacgcgagaactgccgaggc
gagagtgggcggttccgtttgctcggctctcgcaccgcccaccggcgccctcggaaggcc
cgggctgccctcggcgctgccgctcccgaagaggcctctggagtcaggcgttcgctgtcg
acagccctgcacggcgcggtgcgggggcttggccgcggctcggcgcaggcgcagtcagcg
cgggttcttccgcgggctccggcgcgtggagggcgagcggcggcggccatggacgacgag
gaggagacgtaccggctgtggaagatccgcaagactatcatgcagctgtgccatgaccgt
ggctacctggtgacgcaggatgagctggaccagacactggaagagttcaaggcccagttt
ggagacaagccgagtgaggggcggccacggcgcacagacctcacggtgctggtagcccac
aatgacgaccccactgaccagatgttcgtcttcttcccagaggagcctaaagtgggaatc
aagaccatcaaggtgtattgccagcggatgcaggaggagaacatcacccgggccctcatc
gtggtgcagcagggcatgaccccctccgccaagcagtccctggtagacatggcccccaag
tacatcctggagcagtttctgcagcaggagctgctcatcaacatcacagagcacgagctg
gtcccagagcacgtcgtgatgaccaaggaggaggtgaccgagctcctggcccggtataaa
ctccgagagaaccagctgcccaggatccaggccggagacccggtggcccgctacttcggg
ataaagcgagggcaggtggtaaagatcatccggccaagcgagaccgcagggaggtacatc
acctaccggctggtgcagtag

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