KEGG   Zalophus californianus (California sea lion): 113917083
Entry
113917083         CDS       T07874                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
zca  Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:zca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zca03036]
    113917083 (KDM4B)
Enzymes [BR:zca01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     113917083 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     113917083 (KDM4B)
Chromosome and associated proteins [BR:zca03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    113917083 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_3 LBR_tudor DUF7141
Other DBs
NCBI-GeneID: 113917083
NCBI-ProteinID: XP_027440378
UniProt: A0A6J2C8R1
LinkDB
Position
1:3628106..3762072
AA seq 1150 aa
MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDDDVAQWNIGSLRTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALSSPELSTWSA
SRASLKAKLLRRQISLKENRHWRKTEEDRKASLERKKEQTRRPGPPSHRKRSQPKKPKPE
DPKSPGEGATGATLLEEPGGLKEEASQEADAEEEEEEPQPAPPQGREAEATEEDGRGKLR
PAKAKSDRKKKGCGPPHPHHPLLPQLPPPPPTQFPAEEAPRLPPPLEPPVLAPGPAPAEG
NPPPPPLNVVPPEAPGEEPEVKPRPIIPMLYVVPRPGTGCDKGRVSCQQAFEHFAQRGPT
WKEQAAPMELTGPEEESGASEVQAPPTFSKLKMEIKKSRRHPLGKPPTRSPLTVVKQEAS
SDEEAFPFSGEEDMSDPEALRSLLSLQWKNKAASFQAERKFNAAAALTEPYCAICTLFYP
YSQSLQTEKEAPQASLGEGPSAAPPSKSGQKTRPLIPEMCFTSSGENTEPLPANSYIGDD
GTSLLIACAKCCLQVHASCYGIRPELVNEGWTCSRCTAHAWTAECCLCNLRGGALQMTTD
RRWIHVICAIAVPEVRFLNVMERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSCE
HCSTSFHVTCAHAAGVLMEPDDWPYVVSITCFKHKSGGHTVSAPPAPAHPAATACALTQP
RARRPQVQFLRAVSLGQMVITKNRNGLYYRCRVIGTSTQTFYEVNFDDGSYSDNLYPESI
TSRDCVRLGPPPEGEFVELRWADGSLYKARFISSVTSHVYQVEFEDGSQLMVKRGDIFTL
DEELPKRVRSRLSLSTGAPQENTFSGEEVKAAKRPRVGTPRAPEDSGRNPDYLAFMESLL
QAQCRPGAPF
NT seq 3453 nt   +upstreamnt  +downstreamnt
atggggtctgaggatcatggggcccagaacccgagctgtaaaatcatgacgtttcgccca
accatggaagaatttaaggacttcaacaaatacgtggcctacatcgagtcccagggagcc
caccgggcaggcctggccaagatcatccccccaaaggagtggaagcccaggcagacgtac
gatgacatcgacgacgtggtcatcccggcccccatccagcaggtggtgacgggccagtca
ggcctcttcacacagtacaacatccagaaaaaggccatgacggtcggggagtaccgccgc
ctggccaacagcgagaagtactgtaccccacggcaccaggacttcgatgacctggaacgc
aagtactggaagaacctcaccttcgtctctcccatctacggggctgacatcagcggctct
ttgtacgatgacgatgtggcccagtggaacatcgggagcctgcggaccatcctggacatg
gtggagcgtgagtgcggcaccatcatcgagggcgtcaacaccccctatctgtacttcggc
atgtggaagaccaccttcgcctggcacacggaggacatggacctgtacagcatcaactac
ctgcacttcggggagcccaagtcctggtacgccatcccgcccgagcacggcaagcgcctg
gagcggctggccatcgggttcttccccgggagctcccagggctgtgatgccttcctgcgg
cacaagatgaccctcatctcgcccatcatcctcaagaagtatgggatcccgttcagccgg
atcacacaggaggccggggagttcatgatcacgtttccctatggctaccatgctggattc
aatcacgggttcaactgtgcagaatctaccaatttcgccactctgcggtggattgattat
ggcaaggtggccactcagtgcacgtgccggaaggacatggtcaagatctccatggacgtg
ttcgtgcgcatcctgcagccagagcggtatgagctgtggaagcaaggcaaggacctgacg
gtgctcgaccacacccggcccacggccctgagcagcccagagctgagcacctggagcgcc
tcccgggcctcactcaaggccaagctcctacgcagacaaattagtctgaaagaaaacaga
cactggagaaagactgaggaggacagaaaggccagtctagaaaggaagaaagagcagacc
aggaggccggggccgccgtcccaccggaaaaggagccagcctaagaagcccaagccagaa
gaccccaagtcgccaggggagggggccaccggggccaccctcctggaggagcctggcggc
ctgaaggaggaggcctcgcaggaggcggacgccgaggaagaggaggaggagccccagcca
gcgccaccacagggtcgggaggctgaggccacagaagaagacgggaggggcaagttgcgg
ccagccaaggccaagagtgacaggaagaagaagggctgtggccctccgcacccccaccac
cccctcttgccccagctgccaccgcccccacccacccagttccctgccgaggaggcgccc
aggctgccgcccccgctggagcccccggtcctggccccgggccccgcgccagctgaaggg
aaccccccaccaccacctctcaacgttgtgccccccgaggcgcctggcgaggagccagag
gtgaagccgcgccccatcatccccatgctgtatgtggtgccgcggcccggcacggggtgt
gacaagggccgcgtgtcctgccagcaggcctttgagcactttgcccagaggggccccacc
tggaaggaacaggcggcccccatggagctgacgggtcctgaggaggagagcggagccagc
gaggtacaggcgccacccacgttctccaaactgaagatggagatcaagaagagccggcgt
caccccctgggcaagccgcccacccgctccccgctgaccgtggtcaagcaggaggcctcg
agtgacgaggaagccttccctttctccggggaggaggacatgagtgaccccgaggccttg
aggtctttgctctccctgcagtggaagaacaaggctgccagcttccaggccgagaggaag
ttcaatgcggcggctgccctgaccgagccctactgcgccatctgcaccctattctaccct
tacagccagtccctacagaccgagaaggaggccccccaggcctccctcggggagggtccc
tcggctgctcctccttccaaaagtggccagaagacacggccgctgatccccgagatgtgc
ttcacctccagcggtgagaacacggagcccctccccgccaattcctacatcggggatgac
gggacgagcctgctgattgcctgtgccaagtgctgcctgcaggtgcacgccagttgctac
ggcatccgccctgagctggtcaatgagggctggacgtgttcccggtgcacggcccacgcc
tggactgcggagtgctgtctctgcaacctccggggaggagccctgcagatgacgaccgac
cggaggtggatccatgtgatctgtgccatcgccgtccccgaagtgcgcttcctgaacgtg
atggagcgccaccccgtggacatcagcgccatccccgagcagcggtggaagctgaagtgc
gtgtactgccggaaacggatgaagaaggtgtcgggagcctgcatccagtgctcctgtgag
cactgctccacgtccttccacgtgacttgcgcccacgccgccggggtcctcatggagccg
gacgactggccctacgttgtgtccatcacctgcttcaagcacaagtcagggggccacacc
gtgagtgccccgcccgcccccgcccaccctgccgccaccgcctgtgcgctgacgcagccc
cgtgcccgccgcccgcaggtccagttcctgagggccgtgtccttgggccagatggtcatc
accaagaaccgcaacggcctctactaccggtgccgggtcatcggcaccagcacgcagacc
ttctacgaagtgaacttcgacgacgggtcctacagcgacaacctgtacccggagagcatt
acaagtagggactgtgtccggctcggacccccgcccgagggggagtttgtggagctgcgg
tgggcggatggcagcctgtacaaggccaggttcatttcctctgtgacgagccatgtctac
caggtggagtttgaggacgggtcccagctgatggtgaagcgtggggacatcttcaccctg
gacgaggaactccccaagagggtccggtcgcggctgtcgctcagcacgggggcacctcag
gagaacaccttctcgggggaggaggtgaaggccgccaagcgcccgcgggtgggcaccccg
cgcgcccccgaggactcagggcggaacccggactacctagcgttcatggagagcctcctg
caggcgcagtgccggcccggggcccccttctag

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