Zalophus californianus (California sea lion): 113917087
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Entry
113917087 CDS
T07874
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zca04040
]
113917087 (SCN11A)
Ion channels [BR:
zca04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
113917087 (SCN11A)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
113917087
NCBI-ProteinID:
XP_027440394
UniProt:
A0A6J2C8S7
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Position
1:complement(67415844..67504298)
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AA seq
1773 aa
AA seq
DB search
MKMDDRCYPVIFPDERNFRPFTSDTLATIEKRIAIQKEKKKCKDQTAAEPQPRPQLDLKV
SRKLPKLYGDIPHELIARPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNPI
RSLAIKISVHSVFSMFIICTVIINCVFMATAYGKENSNIDTDNAEYVFTGIYIFEALIKI
LARGFILDEFSFLRDPWNWLDSIVIVTAFATYIPEARESIFGLSSLRTFRVFRALKAISV
VSGLKVIVGALLRSVKKLVDVMILTLFCLSIFSLVGQQLFMGSLNQRCLHNDCRNIDNPD
DSCFEKKNSSEFRMCGIWMGNSACSENFQCTHTKRNPDYNYTNFDNFGWSFLAMFRLMTQ
DSWEKLYQQTLRTSGLYSVFFFVVVIFLGSFYLMNLTLAVVTMAYEEQNRNVAAETEAKE
KMFQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGKRKRKSFLLRDSGKDQ
PPGSDSDEDSTKKPHILEQTKRLSQNLSVDYFDEHGDPFQRQRALSAVSILTITVQEQEK
SQEPCLPCGGNLASKYLVWNCSPQWVCVKKALRTVMTDPFTELAITICIIINTIFLAMDH
YNMHRSFDSMLHIGNLVFAGIFMAEMCLKIIALDPYNYFRRGWNIFDSIVALLSFADVMN
STVAGKKKSLLFFRPLRVLRVFKLAKSWPTLNILIKIIGHSVGALGNLTVVLAIVVFIFS
VVGMQVFGSKFNSIKSNKTSCGPTAPCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQ
ETNQALCIVVFLSIMVIGKLVVLNLFIALLLNSFSNEERDGNLDGESKKTKVQLALGRFR
RAFCFVIHTLQHFCHKWCRSQNLPRQKEGTGGPAAKSKDIIPLVTEMKKGPEMREQHDRT
WLAPLAEEEDGFESPGENNAQQATQLEAGKQAFELHQVTKKSISPGAQSVEIDVFSEDDI
CLSEKDPQKKCDTTSVLSECSTIDPQDPFGRVPEMIPKKEPERCFPKGLGHCFPCCAMDK
RKSPWIIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDVHLEKRPNIQALLNCTD
HIFTYIFILEIGLKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLKSLKSFRTLRALRP
LRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGNFGRCVNRTDIN
SVINYSTVASKTECEGGNLSWVTLPVNFDNVGMAYLALLQVATFKGWMDIMYAAVDSRGK
DLQPGFEEKPENYLFFVAFIIFGSFFTLNLFIGVIIDNFNQQQKKLGGEDIFMTEEQKKY
YNAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTSQVFDIIIIILIFLNMLSMMAESDDQSE
ATKLVLERLNLAFVVIFTIECLTKIFALRQYYFTIGWNLFDCVIVVLSIVSTMVSALENQ
EHIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYA
IFGMSSFCRVKEEHGIDDIFNFKTFVGSILCLFQITTSAGWDALLKPMLQSKDSCNPNLD
SRHLPAIAITYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFDIFYEVWEK
FDPEATQFIKYSALSDFADALPEPLRVAKPNKFQFLMMDLPMVSGDRLHCLDILFAFTTR
VLGDSGGLDSMKVMMEEKFMEANPSKKLYEPIVTTTKRKEEERCAAVIQKAFRKYRLKMS
TGALEDRPRSPLHTLCNGDLSSSGVAEGKVHYD
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggatgacaggtgctacccagtgatctttccagatgagcggaatttccgtccc
ttcacttctgacactctggctacaattgagaagaggattgccatccaaaaggagaaaaag
aagtgcaaagaccagacagcagcagaaccccagcctcgacctcagcttgacctaaaggtc
tccaggaagttgcccaaactctatggtgacattccccatgagctgatagcaaggcccctg
gaagacttggacccattctacagaaatcataagacatttatggtgttgaacaaaaagaga
acaatctaccgcttcagtgccaagcgtgccttgttcatttttgggcctttcaatccaatc
cgaagtttagccatcaaaatctcggtccattcagtgttcagcatgttcatcatctgcacc
gtcatcatcaactgtgtgttcatggctactgcctacgggaaagaaaacagcaatatagat
accgacaatgctgagtatgtcttcactgggatttatatttttgaagctttgataaaaata
ttggcaagaggttttattctggatgagttttcttttcttcgagatccatggaactggctg
gactccattgtcattgtaacagcgtttgcaacatacataccagaagccagggaaagcatc
ttcggtctgtcatccctgcgtaccttccgagtgttcagagctttgaaagcaatttcagtg
gtttcaggtctgaaggtcattgttggggccttgctgcgctctgtgaagaagcttgttgac
gtgatgatcctgactctcttttgcctcagcatcttcagcctggtaggtcagcagctcttc
atgggaagtctgaaccagagatgtctccataatgactgtaggaatatcgataaccctgat
gacagttgctttgaaaagaaaaattcctctgaattcagaatgtgtggcatctggatgggt
aacagcgcctgttctgaaaattttcaatgcacacacaccaaaaggaatcctgactataat
tataccaattttgacaactttggctggtcttttcttgccatgtttcggcttatgacccaa
gattcctgggagaagctttatcaacagaccttgcgtacctcagggctctactcagttttc
ttctttgtggtggtcatcttcctgggctctttctacctgatgaacttaaccctggctgtt
gtcaccatggcttatgaggaacagaacagaaatgtagctgctgagacagaggccaaggag
aagatgttccaggaagcccagcggctgctgaaggaggagaaggaggctctggttgccatg
ggaattgacagaagttcacttaattcccttgaagcatcatctttttccccaaagaagaga
aagctttttggtaaaaggaaaagaaagtcctttcttttgagagactctgggaaagaccag
cctccaggatcagattctgatgaagattccacaaaaaagccacacatcctagagcaaacc
aaacgactatcccagaatctgtcagtggattacttcgatgagcatggggaccccttccaa
agacagagggccctgagcgccgtcagcatcctcaccatcaccgtgcaggaacaagaaaaa
tcacaggagccttgcctcccatgtgggggaaacctggcatccaaatacctcgtatggaac
tgtagcccccagtgggtgtgcgttaagaaggccctgagaaccgtgatgactgacccattt
actgagctggccatcaccatctgtatcatcatcaacactatcttcttggccatggatcat
tacaacatgcaccggagttttgattctatgttgcatatagggaatttggttttcgctggc
attttcatggcagaaatgtgcctaaaaattattgcgcttgatccctacaactactttcgc
cgaggctggaacatttttgacagcattgttgctcttctgagttttgcagatgtgatgaac
agtacagttgcagggaaaaaaaaaagcctgctgtttttccgtcccttacgagtgctgaga
gtcttcaagttagccaaatcctggccaactttaaacatactgataaagataattggccac
tccgttggagccctgggaaacctgaccgtggtcctggctattgtggtctttattttctca
gtggttggcatgcaggtctttggctctaaattcaattctataaagagcaataaaacatcc
tgtggccctacagccccatgtttacgacggtggcacatgggggatttctaccattccttt
ctggtggtattccgcatcctctgtggggaatggattgaaaacatgtgggaatgtatgcaa
gaaacaaatcaagcactgtgcattgtcgtctttctgtcaatcatggtgataggaaaactt
gtggtgctcaacctcttcattgccttgctgctcaattccttcagcaatgaggagagagat
ggaaacttggatggagagtccaaaaaaaccaaagtccagttagccctgggtcggttccgc
cgtgctttttgcttcgtaatacatactcttcagcatttttgtcacaagtggtgcaggagt
caaaacttaccaaggcaaaaagaggggacaggaggccctgctgccaaaagcaaagacatc
attccactggttacagagatgaaaaagggcccagagatgagggagcagcatgaccggacc
tggttggccccactcgcagaggaagaggatggttttgaatctcctggtgaaaataatgca
cagcaggccacacaacttgaggctggaaaacaggcctttgaactccatcaggtgaccaag
aagtccatcagcccaggagctcaaagtgtggaaattgatgtgttctctgaagatgacata
tgtttgtcagaaaaggatccccaaaagaagtgtgatactaccagtgtgctctcagaatgt
agcaccatcgatccacaggatccctttggacgggtgcctgaaatgattcccaaaaaagaa
ccagagagatgttttcccaaaggcctgggtcactgctttccatgctgtgccatggacaag
agaaagtccccctggatcatttggtggaacctgcggaaaacttgttaccaaatagtgaaa
cacagctggtttgagagctttattatctttgtgattctcctgagcagtggggcactggta
tttgaagatgttcaccttgagaaacgacccaatatccaagcattacttaattgtactgac
catattttcacatacatttttatcctggagattggtctaaaatgggtggcctttggattt
gggaagtatttcaccagtgtctggtgctggcttgatttcatcattgtgattgtctctgtg
accagtctcattgacttaaagagcttgaagtccttccggaccctaagagccctgaggccc
ctgcgagcattgtctcagttcgagggaatgaaggtggtagtcaatgctctcataggtgcc
atacctgccattctgaatgttttgcttgtctgcctcattttctggctgatattttgtatc
ctgggagtaaacttcttttctggaaattttggaagatgcgttaacagaacagatataaac
tcggttataaattacagcactgttgcaagcaaaactgaatgtgaaggtggaaatttatct
tgggtcacccttccagtcaactttgacaatgtgggaatggcttaccttgccctgctgcaa
gtggcaacatttaagggctggatggatattatgtatgcagctgtcgattccagagggaaa
gatctacagccagggtttgaggagaaaccagaaaactaccttttcttcgtggcttttatc
atctttggttcattctttacactgaatctttttattggtgttattattgacaacttcaac
caacagcagaaaaagttaggtggtgaagacatttttatgacagaagaacagaagaaatac
tataatgcaatgaaaaaattaggatccaaaaaacctcaaaagcccattccaagacctctg
aataaatgccagggtctcgtgtttgacctagtcacaagccaggtctttgacatcatcatc
atcatcctcattttcctcaacatgcttagcatgatggctgaatcagatgaccagtctgaa
gccacgaaactcgtccttgagcgtctcaacctggcctttgtggtcatctttacaattgag
tgtctcaccaaaatctttgctttgaggcaatactacttcaccattggctggaatttattt
gattgtgtgattgtggttctttctattgttagtacaatggtttctgccttggagaaccag
gagcacattcccttccctccaacactcttcaggattgtccgcttggctcggattggtcgg
atcctgagacttgttcgggcagcacgaggaattaggactctccttttcgctctgatgatg
tctcttccctctctattcaacatcggtcttctactttttctggttatgtttatttatgcc
atttttggtatgagctctttttgcagagtgaaagaggagcatggaattgatgacatattc
aacttcaaaacttttgtcggcagcatactctgtctcttccagatcaccacatcagcaggc
tgggatgccctcctcaagcccatgctgcaatcaaaggattcatgcaaccccaacttagac
agccgtcacctccctgccatagccatcacctacttcgtcagttacatcatcatctccttt
ctcattgttgtcaacatgtacattgctgtgattttagagaattttaacacagccactgaa
gaaagtgaggaccctttgggtgaagatgactttgatatattctatgaagtctgggaaaag
tttgacccagaagcaacacagttcatcaaatattctgccctttctgactttgccgatgcc
cttcctgagcctttgcgcgtggcaaagcccaataaatttcaatttctcatgatggacttg
cccatggtgagtggagatcgtctccactgcctggatattctcttcgcatttaccactagg
gtactcggtgactccggtggcctggacagcatgaaagtgatgatggaggagaagttcatg
gaagccaacccttccaagaagttatatgaacccatagtcaccaccaccaagaggaaggaa
gaggaaagatgtgctgctgttattcaaaaggcctttcgaaaatacaggctgaagatgtcc
acaggtgccttggaagacaggccccgttcaccactccacacactctgcaatggagacctg
tccagctctggggtggccgagggcaaagtccactatgactga
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integrated database retrieval system
