Zalophus californianus (California sea lion): 113917093
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Entry
113917093 CDS
T07874
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113917093 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113917093 (VPS8)
Membrane trafficking [BR:
zca04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113917093 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
TPR_Vps41
zf-RING_11
zf_RING_Vps8_fungal
Clathrin
zf-RING_2
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
GED
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
113917093
NCBI-ProteinID:
XP_027440402
UniProt:
A0A6J2CCN8
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All DBs
Position
1:135428684..135683437
Genome browser
AA seq
1432 aa
AA seq
DB search
MENEPDHENVEQSPSAKTTEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKRLHLYYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDAGK
RKAVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLERKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGMTPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENHLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGRTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASLEEEIYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREVSCEEEVFNYIHNILSIPGHSAEEKQS
VWQKAMDHIEELVSLRPCKAAELVATHFSEQIETVIKKLQNQVLLFKFLRSLLDPREGIH
VNQELLQMSPCVTEQFIELLCQFSPNQVIETLQVLECYRLEETIQITQKYQLHEVTAYLL
EKKGDIHGAFLIMLQRLQRKLQEITHQDEKAKEELSLKDVEDTMVETIALCQRNSHNLNQ
QQREALWFPLLEAMMAPQKLSGSAAPHLHPDALKSLTMQVLNSMAAFIALPSILQRILQD
PVYGKGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQD
YCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTTETEGQTRWTCYKCSSSNKVG
KLSENSSEIKTGKTAPSQVKMSPSCHPSKGDSAVKKAASEPVLDPQQIQAFDQLCHLYRG
SSRLALLTELSQNRSSESYRPFSGSQSGPAFNSIFQNENFQLQLIPPPVTED
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagagccccagtgccaagactactgaa
gaagagctgaataagtctttcaatcttgaagcttcgctttcaaaattctcttacatagat
ctggacaaggaactggagttcaaaaatgatctgattgatgacaaggagtttgatattcct
caagttgatactcctccaacactggaaagcatactcaatgagactgatgatgaagatgag
tcttttgttcttgaggatcctacattgttaaacattgatactatcgattctcactcctat
gatacttcgtctgtagcaagttcggatagtggtgacaggaccaacttaaaaagaaagaag
aaattacctgattctttttcactccatgggtcagttatgcgacattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtggatgctggcttgcctacagcaatt
gcagtgtccagtctgatagctgtgggtacatctcatggattggctctaatatttggaaaa
gatcagaatcaagctttgcgactttgtctgggtagcactagtgttggaggtcagtatgga
gccatctctgccctcagtatcaacaatgactgctcaagacttctctgtggctttgctaaa
ggacagatcacgatgtgggatctggccagtggaaaacttctgagatcaataacagatgct
catcctccaggaacagcaatattgcatattaagtttacagatgatccaactcttgcaatt
tgcaatgacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgaga
acatgtgagtcaagatgcctgttcagtggctccaagggtgaggtttgctgtattgagcct
ctccattcgaagcctgagttgaaagatcatcctatcacacagttttccttactggccatg
gcatccttaacaaagatactggtcattggattgaaaccatccttgaaagtgtggatgact
tttccctatggacggatggatccttccagtgttccattgctggcctggcactttgtggca
gtgcataattatgtgaatcccatgcttgccttctgcagaggagatgttgttcattttctg
ttggttaagagagatgagtctggagcaatacatgttactaagcaaaagcgccttcacctc
tactatgacctcatcaactttacttggataaactcacgcacagttgtgctcttggacagt
gtggagaagttgcatgtgattgatcggcagactcaagaggaattggaaacagtggagatc
tcagaagttcagctggtctacaacagcagtcatttcaaatccctagccactggaggaaat
gttagccaggcactggctttggttggagagaaggcttgttatcaatccatcagtagctat
ggtggtcagatcttttatttggggacaaaatctgtttatgtgatgatgctgagaagctgg
agagagagagtggatcatctcctgaaacaagattgtcttacagaagccttggctcttgca
tggtctttccatgaaggaaaagcaaaagcagtagtgggattatccggggatgccggtaag
cgaaaggctgttgttgcagatcgaatggtagaaatcctgttccactatgcagatcgagct
ctgaaaaagtgtccagaccagggaaaaatccaagtgatggagcagcattttcaggacatg
gtgcctgtcatcgttgattactgcctgctgttggagcgaaaggatcttttatttagccag
atgtatgacaaactaagtgagaattcagtggccaaaggagtgtttttggaatgccttgaa
ccatatattttaagtgataaattggtgggaatgaccccccaggtaatgaaagacttgatt
gttcacttccaagataaaaagttaatggaaaatgtggaagccctcattgtacatatggat
atcaccagcctagatattcagcaggtagttctcatgtgttgggaaaatcatctgtatgat
gctatgatctatgtctacaacagaggcatgaatgaatttattagtccaatggagaaactt
ttcagagtcattgctcctcctctgaatgcaggaaggacgctaacagatgagcaagttgtt
atgggcaacaaacttcttgtatatattagctgttgtcttgcaggcagagcctatcccctt
ggtgacatccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctgatt
cgcctgcattcagcagaagcttccctggaggaagaaatctacccgtatgttcggactctg
ctacattttgacacaagagaatttctaaatgtattggcactgacttttgaagattttaaa
aatgacaagcaagccgtagaatatcaacaacgaattgtggatattttgttgaaagttatg
gtggagaattccgattttactccctcacaagtagggtgtctctttacattccttgcccgg
cagcttgcaaagccagacaataccttgtttgtaaacagaaccctttttgatcaggtcctt
gaattcctctgtagtcctgatgatgactcccgacactctgaaagacagcaggtcctttta
gaattgcttcaggctggaggcatagttcagtttgaagagagtcggctcatccgaatggca
gaaaaagcagaattctatcaaatttgcgagtttatgtatgaacgagaacaccaatatgac
aaaataattgattgctacttacgtgacccactaagggaggtgagctgtgaggaagaagtc
tttaactacattcacaatatcttatccattcctggacacagtgcagaggagaagcagtct
gtatggcagaaagcaatggatcatatagaggaacttgtatccctgaggccctgtaaagct
gcagagctggttgctactcacttttctgaacagattgaaacagtcattaaaaaacttcag
aaccaggttttgcttttcaaatttttgaggagtcttcttgacccaagggaaggtattcat
gtaaatcaagaattgctgcagatgtctccctgtgttacggagcagttcattgagctgttg
tgtcagttcagcccaaaccaggttatagagacactgcaggtccttgagtgctaccgcctg
gaagaaaccatccagattacccagaagtatcaacttcatgaagtcactgcctatctatta
gaaaaaaaaggagatattcatggtgccttcttaataatgctacagagactacaaagaaaa
cttcaagagataacacatcaagatgaaaaggccaaagaggagctctcattgaaggatgtt
gaagataccatggtagagacaattgccctttgccagcgaaattcacataatttgaaccag
cagcaacgagaggcactctggtttccgttgttggaggcaatgatggcccctcagaagctg
tctggttcagctgcacctcatctacaccctgacgctctgaaatctttgaccatgcaagtt
ctaaacagcatggctgcatttattgccctaccatcaatcttgcaaagaatcttacaggat
ccagtttatggaaaaggaaaacttggagaaatccagggacttattctgggaatgttggat
acctttaactatgaacaaacactgctggaaacaactactagccttctaaaccaagatctc
cattggtcattgtgtaacctgagagcttcagtcaccagaggactgaatcccaagcaggat
tactgctctatatgtttgcagcagtacaagagacgccaagaaatggctgatgaaatcatt
gtctttagctgtggccatttgtatcactcattctgtctgcaaaacaaagagtgcaccaca
gagactgaggggcagacgagatggacatgctacaaatgcagctcaagtaacaaagtaggg
aaattaagtgaaaattcatctgaaattaaaacggggaagacagccccatcccaggtaaaa
atgtctccttcttgtcatccatccaaaggagattctgctgttaagaaggcagcctcggaa
cccgtcctggacccccagcaaatccaggcgtttgatcagctttgccatctctaccgagga
agctcccggctggctctcctcacagagctctcccagaatcgcagcagtgagagctacagg
ccattcagtggctcccagagtggccctgctttcaacagcatcttccagaatgagaatttc
cagctgcagctcattcccccacctgtgactgaggactga
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