Zalophus californianus (California sea lion): 113917949
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Entry
113917949 CDS
T07874
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04136
Autophagy - other
zca04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113917949 (ATG4D)
04136 Autophagy - other
113917949 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zca01002
]
113917949 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113917949 (ATG4D)
03029 Mitochondrial biogenesis [BR:
zca03029
]
113917949 (ATG4D)
Peptidases and inhibitors [BR:
zca01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
113917949 (ATG4D)
Membrane trafficking [BR:
zca04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
113917949 (ATG4D)
Mitochondrial biogenesis [BR:
zca03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113917949 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
113917949
NCBI-ProteinID:
XP_027441852
UniProt:
A0A6J2CGT9
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All DBs
Position
1:7784103..7790474
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AA seq
501 aa
AA seq
DB search
MNSVSPAAAQYRSGSPEDARRPEGRRPRGPRVPDPNGLRPSGASGPALGSPAAAPGEPDE
VDKFKAKFLTAWNNVKYGWAVKSRTSFSKISSVHLCGRRYRFEGEGDIQRFQRDFVSRLW
LTYRRDFPPLAGGGLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWAEGTGPGPSEPSG
LASPNRYRGPARLMPPRWAQGTPELEQERRHRQIVSWFADHPQAPFGLHRLVELGQSSGK
KAGDWYGPSVVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLVARPDPTAEWKAVV
ILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQGRPAPSRSILPPP
PTLPLLSPPHASTPADDFLLYLDPHYCQPTVDVSQADFPLESFHCTSPRKMAFAKMDPSC
TVGFYAGDQKEFETLCSELTRVLSSSSATERYPMFTLAEGHAQDHSLDDLCSQLSQPTLR
LPRTGRLLRAKRPSSEDFVFL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggccgccgcgcagtaccggagcgggagcccggaggacgcccgc
cgccccgagggccgcaggccgcggggcccccgagtgcccgaccccaacggcctgaggccc
tctggagccagcggccccgctcttggctcgcccgcggccgcccccggggagccggacgaa
gtggacaagtttaaggcgaagttcctgacggcctggaacaacgtgaagtacggttgggca
gtcaaaagccggaccagctttagcaagatctccagcgtccacctctgtggccgccgctac
cgcttcgagggcgagggtgacatccagcgtttccagcgggacttcgtgtcccgcctatgg
ctcacataccgccgggacttcccgcccctggccggaggcggcctgacctcggactgtggc
tggggatgcatgctgcgcagtgggcagatgatgctggcccagggcctgctgctgcatttc
ctgccccgagactggacatgggccgagggcacgggcccgggcccctctgagccatcaggg
ttggcctctcccaaccgttaccgtgggcctgcacgcttgatgcccccgcgctgggcccag
ggcacccctgagctggagcaggaacgtcggcaccggcagatagtgtcctggttcgccgac
cacccccaggccccctttggcctacaccggctggtggagcttgggcagagctcaggcaag
aaggcgggggactggtatgggccatctgtggtggcacacatactcaggaaagccgtggag
agctgctcagaggtcacccgcctggtggtgtatgtttctcaggactgcacagtgtacaag
gcagatgtggcacgcctggtggccaggccggaccccacggccgagtggaaggccgtggtc
atcttggtgccagtgcggctgggcggcgagactctcaaccccgtgtatgtgccctgtgtg
aaggagctcctgcgttcagagctatgcctgggcatcatggggggcaagccacggcattcg
ctgtacttcatcggctatcagggtaggcccgccccatcccgctccatcctgccccccccc
ccgaccctacccctcctcagcccccctcacgcctccacccctgcagatgacttcctgctc
tacctggacccccactactgccagcccactgtggatgtcagtcaggctgacttccccctg
gagtccttccactgcacctcaccccgaaagatggccttcgccaagatggacccaagctgt
acagtggggttctatgctggagaccagaaggagtttgagacgctctgctcagagctgacc
agggtcctcagctcctcctcagccaccgagcgctaccccatgttcaccctcgctgagggc
catgctcaggaccacagcctggacgacctctgctcccagctctcccagccaacactgcgg
ctccctcgcacggggcggctcctcagagccaaacgcccaagctctgaggactttgtgttt
ttataa
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