Zalophus californianus (California sea lion): 113918342
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Entry
113918342 CDS
T07874
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113918342 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113918342 (CNOT10)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113918342 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
ARM_TT21_N
TPR_12
TPR_19
ARM_TT21
TPR_16
TPR_8
TPR_MalT
TPR_7
TPR_17
DUF6058
Motif
Other DBs
NCBI-GeneID:
113918342
NCBI-ProteinID:
XP_027442537
UniProt:
A0A6J2CIP9
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All DBs
Position
1:complement(62513730..62591412)
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AA seq
803 aa
AA seq
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MKPVGLKGVKAFAPKSSVRLEGQPCSLGQSRRKVKLMDERPYTLTIGNGDYFWTNKDTLW
NYVQTLSDQGAEKHEGTSQSSGITDQEKELSTSAFQAFTAGNYDACLQHLACLQEVNKDD
YKIILNTAVTEFFKNNQMTTDSLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAIAVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGNNNKNGKNETGNNTNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTAEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASMEFAAICLRNALLLLPEEQQDPK
QENGSKNSNQLGGNTESSESSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVTSARTVMLFNLGSAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPTVKTLSEMRK
KPVFQPVHPIQPIQMPAFTAQRK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgttggcttaaagggtgtcaaggcttttgctcctaagagctctgtgcgcctg
gaaggtcagccatgttcgttaggccagagtagaaggaaagtcaaacttatggatgaacgg
ccatacactcttacaattggcaatggagactacttttggacaaataaagacacattatgg
aattatgtgcagactctttctgatcagggagcagagaagcatgaagggacaagtcagtcc
tctgggattactgatcaagagaaggagttgtccaccagcgctttccaagctttcacggct
ggaaattatgatgcctgtctacaacaccttgcttgcctacaagaagtaaacaaagatgat
tataaaataattttgaatacagcagtgactgagttttttaaaaacaaccaaatgacaaca
gatagtttgagacagacacttaaccagctgaagaatcaggtccattcggctgttgaagaa
atggatggattagatgatgttgagaacagcatgttgtattacaatcaggcagtcattctt
tatcatctgcggcagtacacagaagcgatagcagttggtgaaaaactttaccagttcata
gaaccttttgaagaaaaatttgcccaagcagtgtgttttttgcttgtagacctatatata
ttaacctatcaagctgagaaagctttgcatcttcttgctgtcctagaaaaaatgatttca
caaggcaacaataacaaaaatgggaagaatgagactggtaataacacgaacaaagatgga
tcaaatcataaagctgaaagtggagccctaatagaagctgcaaaatcaaagattcatcag
tataaagtaagagcttatatccaaatgaagtccctgaaagcatgcaaaagggaaatcaag
tcagtcatgaacacagctggaaattctgcaccctctctatttcttaaaagcaattttgag
tacttaagaggcaattatcgaaaagctgtgaagctattaaatagttcaaacattgctgaa
catccaggattcatgaaaacaggtgaatgcttgagatgcatgttctggaataatcttggt
tgcatccattttgccatgagcaagcacaatttgggaattttctactttaaaaaggctcta
caggagaatgacaatgtttgtgcacagctcagtgcaggcagcactgatccaggcaagaaa
ttttcgggaagacccatgtgtacattactaaccaacaagaggtatgagttgctatataac
tgtggcattcagctacttcacattggaagacctcttgctgcctttgagtgtctgattgaa
gctgttcaggtttatcatgcaaatccccgcctctggctaaggttggctgaatgctgcatt
gctgcaaataaggggactgctgaacaagaaactaaaggccttccgagtaagaaaggaatt
gtacagtctattgtgggtcaaggctatcatcgtaaaatagttctggcatcacagtccata
cagaatactgtatataatgatggacagtcttcagccattcctgtagccagtatggagttt
gcagccatttgtctcagaaatgccttgttgctgttacccgaagaacagcaagatccaaag
caggaaaatgggtctaaaaatagtaatcaattaggtgggaacacggagagcagtgaaagc
agtgaaacttgcagcagtaaaagccatgatggagataaattcattccagctccaccttct
tctccattgagaaaacaggaattagaaaacttaaaatgctccatacttgcctgtagtgct
tacgtggctctggctttgggtgataaccttatggctttgaatcacgcagataaacttctt
cagcagcccaagctgtcaggatcgcttaagtttttgggccatttatatgctgcagaagcc
ctcatctctctggacagaatatctgatgccattactcacttgaacccagagaatgtcact
gatgtttccttaggaatctcttcaaatgagcaggaccaaggctcagacaaaggtgaaaat
gaagcaatggaatcctctgggaagcgggcccctcagtgctaccccagttcagtcacctct
gccaggaccgtgatgctattcaatcttggcagcgcctactgcctgaggagcgaatacgac
aaagcccgaaagtgtctccaccaggcggcttcaatgatccatcctaaagaggtgccccct
gaagccatcttactggcagtctaccttgaactgcaaaatggtaatacccagctggcctta
cagatcatcaaaaggaatcaactgctccccacagtgaaaacactgtctgagatgagaaag
aagccagtgttccagcctgtccacccgatccagcccatccaaatgccagctttcactgca
cagagaaagtga
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