Zalophus californianus (California sea lion): 113918534
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Entry
113918534 CDS
T07874
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zca04121
]
113918534
Enzymes [BR:
zca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113918534
Ubiquitin system [BR:
zca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113918534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-ANAPC11
zf-C3HC4_3
zf-RING_11
zf-RING_Vps41
DUF3450
WEMBL
Laminin_II
HIP1_clath_bdg
Crescentin
zf_RING_Vps8
zf-RING-like
BRE1
OVT1
Zn_ribbon_8
HMMR_N
RINGv
RING_XB3-XBAT31
GAS
zf_RING_Vps8_fungal
FANCL_C
MscS_porin
CCDC144C
DUF745
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
113918534
NCBI-ProteinID:
XP_027442855
UniProt:
A0A6J2CF26
LinkDB
All DBs
Position
1:complement(18890299..18911164)
Genome browser
AA seq
469 aa
AA seq
DB search
MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGRRTIIN
KLFFDLAQEEESVLDAEFLKNELDNTRAQLSQKEKEKRDSQVIIDTLRDTLEERNATVES
LQKALDKAEMLCSTLKKQMKYLEQQQDESKQAQEEARRLRSKMKTMERIELLLQSQRPEV
EEMIRDMGVGHSAVEQLAVYCVSLKKEYENLKEARKASGELADRLKKDLFSSKSKLQTVY
SELDQTKLELKSAQKDLQSADKEIVSLKKKLTMLQETLNLPPMDSETVNRLVLESPAPIE
MLSLKLHRPAFGDDIDLNATFDVDTPPSQPSSIHHGRAKKLCQEIAHSPVQDIPKKMPKG
PKQESQLSLGGQHCVGEPDEELASAFPVFIRNAVLGQKQPKRAKAETCRGTDTVRTGFDG
LGGRTKFIQPTDTTMIRPVPVKPKPKTKQRVGVKRALPPSQAKLDTFLW
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgtgcgctgtgcaccatctgctccgacttcttcgaccactcccgagatgtg
gccgccatccactgcggccacaccttccacctgcagtgcctaattcagtggtttgagaca
gcaccaagtcggacctgcccacagtgccgaatccaggttggcagaagaaccattatcaat
aagctcttctttgaccttgcccaagaggaggagagtgtcttagatgcagaattcttaaag
aatgaactggataatacgagagcccagctttcccagaaagagaaggagaaaagggacagc
caggtcatcattgacaccctgcgggacacgctggaagaacgcaacgccactgtggaatct
ctgcagaaggccttagacaaggccgaaatgctgtgctccaccctcaagaagcagatgaag
tacttggagcagcagcaggatgagagcaaacaagcccaggaggaggcgcgccgactcagg
agcaagatgaaaaccatggagcggattgagctcctgctccagagccagcggcccgaggtg
gaggagatgatccgagacatgggtgtggggcactccgcggtggaacagctagccgtgtac
tgcgtgtccctcaagaaagagtatgagaatctaaaagaagcacggaaagcctcaggggag
ctggcagacagactgaagaaggacttgttttcttccaaaagcaagttgcagacagtctac
tctgaactagaccagaccaagttggagctgaagtcggcccagaaggatttacaaagtgct
gacaaggagattgtgagcctgaaaaaaaagctaacgatgctgcaggaaaccctgaacctg
ccacccatggacagtgagactgtcaaccgcctggttttagagagcccagcccccatagag
atgctgagcctgaagcttcaccgaccggccttcggtgatgacattgacctcaatgccacc
tttgatgtcgacacgcctccatcccagccctccagcatccatcatggccgtgccaagaag
ctctgccaagagatagcacactctcccgttcaggacatccccaagaagatgcccaaaggc
cccaagcaggagtcccagctctcactgggcggccagcactgtgtgggagagccagatgag
gagctggctagtgcctttcctgtcttcatccggaatgccgtcttaggccagaaacagccc
aagagggccaaggcagagacctgtcgcggcacagatacggtaaggacaggcttcgatggg
cttggaggtcggacaaaattcatccaacctactgacacgactatgatccgcccagtgcct
gtgaaacccaagcccaagactaagcagagagtgggggtgaagagagcgctccctccctcc
caggccaagctggacaccttcctgtggtag
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