Zalophus californianus (California sea lion): 113918699
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Entry
113918699 CDS
T07874
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04382
Cornified envelope formation
zca04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
113918699 (COL7A1)
09158 Development and regeneration
04382 Cornified envelope formation
113918699 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
fn3
VWA
VWA_2
Kunitz_BPTI
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
DUF4992
Motif
Other DBs
NCBI-GeneID:
113918699
NCBI-ProteinID:
XP_027443197
UniProt:
A0A6J2CKI6
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All DBs
Position
1:complement(17828480..17859169)
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AA seq
2939 aa
AA seq
DB search
MRLPFLVAALCAGILAGALRVRAQHRERVTCTRLYAADIVFLLDGSSSIGRGNFREVRGF
LEGLVLPFSGAASAQGVRFAAVQYSDEPRTEFGLDALGSGGDVIRAIRELSYKGGNTRTG
AAVLHVADHVFLPQLARPGVPKVCILITDGKSQDLVDTAAQRLKGQGVKLFAVGIKNADP
EELKRVASQPTSDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVALPTDDLTSGPRDLVL
SEAGSQSLRVQWTAASGPVTGYKVQYTPLTGLGQPLPSERREVSIPAGETSTQLQGLRPL
TEYQVTVVALYANSIGEAVSGTARTTALEGPELTIQNTTTHSLLVAWRSVPGATGYRVTW
RVLSGGVTQQQELGPGQGSVLLRDLEPGTDYEVTVSGLLGRSVGAATSLTARTDASVEQT
LRPVILGPTSILVSWNLVPEARGYRLEWRRESGLGGPQRVVLPSDVTRYQLDGLQPGTEY
RLTLYTLLEGREVATPATVVPTGPGLPVGPVTDLQAAELPGQRVRVSWSPVPGATEYRIT
VRSAQGVERTLVLPGSQTAFDLDDVRAGLSYTVRVSARVGTREGGASVLTVRRELETPLA
ISGLRVVASDATRVRVAWGPVPGAGGFRISWRTDSGPESSRTLPPETTATDIMGLRPGTS
YQVAVSALRGREEGPPVVIMAQTDPLGPVRTVHVTQTSSSSVTIAWNRVPGATGYRISWH
SGLGPEKSQLVSGEATVAELDGLEPDTEYTVHVWAHVAGVDGTPASVVVRTDPAPVGSVS
KLQILNASSDVLRVTWVGVTGATAYRLAWGRSEGGPTRQQVLPGNTDSAEIRGLEGGVSY
SLRVTALVGDREGAPVSIVVTTPPEAPPALETLRVVQRGEHSLRLRWQPVPGAQGFRLRW
RPEGGQEQSRVLGPDLSSYELDGLEPATLYRIWLSVLGSAGEGPPTEVTARTESPRVPST
ELRVVDTSIDSVTLAWTPVSGVSSYILSWQPLRRPGQDIPGASQTLPGISSSQQVTGLEP
GIAYTFSLIPIQEGVRGPEASVTQIPMCPHGLMDVVFLLHTTQDNAHRAEAVKRALERLV
SALGPLGPQAVQVGLLSYSHRPSPLFPLNSSYDPGVILQKIRSIPYVDPSGNNLGTAVVT
AHRHLLAPDAPGRRQHVQGIMVLLVDEPLRGDIFNPIREAQAAGLKVMILGQAGADPEQL
RRVVPGMDPVQTFFAVDDGPSLEQAVSSLATSLCRIGSATQPQPEPCRVHCPEGQKGEPG
EMGLRGQAGPPGPPGLPGRIGVPGPQGPPGSTAAKGERGFPGADGPPGSPGRPGTPGSPG
SKGSPGWPGPRGETGERGPRGPKGEPGEPGRVIGGEGPGLPGQKGDPGPPGLPGSRGPLG
DPGPRGPPGLPGMAMKGDKGDRGERGPPGLGDGSTAPGEPGLPGLPGSPGPQGPVGPSGE
KGEKGDSEDGAPGLPGQPGSPGERGLRGPPGDIGPKGDRGLKGAVGETGEKGERGSPGPV
GPQGPPGVAGRPGAEGPEGPPGPAGRRGEKGEPGRPGDPAVGPDGVGAKGEKGDVGPTGP
RGAAGIKGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPLGEKGDPGRPGPP
GPVGPRGRDGEVGEKGDTGFPGDPGSPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRN
GSPGPSGPKGDRGEPGPPGLPGRLVDPGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGE
RGVSGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRVGLDGKPGAPGPPGLHGATGKAGD
PGRDGLPGLRGEHGPPGPPGPPGAQGRPGEDGKPGLNGKNGEPGDPGEGGKKGEKGDSGA
PGREGHDGPKGERGAPGSPGLQGPPGLPGQVGPSGQGFPGVPGNTGPKGDRGETGPKGEQ
GLPGERGLRGDPGSVGNVERLLETIGIKASALREIVETWDESSGSFLPMPDRRRGPKGEP
GERGPPGKEGPIGFSGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPGL
PGRAGGTGEAGRPGERGERGEKGERGEQGRDGPPGLPGPPGAPGPKVAVEEPGPGLSGVQ
GPPGFKGAKGEPGSDGDRGPKGDRGVPGLKGDQGEPGQRGLNGSPGLPGERGVAGPEGKP
GLQGPRGTPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVG
LPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGAGGKDGDRGAPGVPGSPGVPGPVG
PKGEPGPMGAPGQAVVGLPGAKGEKGAPGGLVGDLLGEPGAKGDRGLPGPRGEKGEAGRA
GEPGDPGEDGQKGAPGLKGNKGDPGVGVQGPPGPAGPLGLKGDVGPPGPPGAPGVVGFPG
QTGPRGEMGQPGPSGERGLAGLPGREGAPGALGPPGPPGSTGAPGISGLKGDKGDPGAGL
PGARGERGERGEPGVRGEDGRPGQEGPRGLMGPPGSRGERGEKGDAGASGLKGDKGDAAM
AVGPPGPRGAKGDTGQQGPPGIDGDKGPRGDNGNPGEKGTKGEPGDKGSAGLLGARGLTG
PKGEPGTAGIPGDPGTPGKDGAPGVRGDKGDSGFMGPRGLKGERGIKGACGLDGEKGDKG
EAGPLGRPGLAGRKGDMGEPGVPGQAGAPGKEGLIGPKGDRGFDGQPGSKGDQGEKGERG
PPGIGGFPGPRGSDGSSGPPGPPGSVGPKGPEGLQGQKGERGPPGERVVGAPGAPGTPGE
RGEQGRPGPAGPRGEKGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSRPLPSYAADTA
GPQLHPVPVLRVSHAEEEGLVPPEDDEYEYSEYSVEEYQDPEAPREGDDPCLLPLDEGSC
AAYTLRWYHRVVADGTEACHPFVYGGCGGNANRFGTREACERRCLPSVVQNQGTGAARS
NT seq
8820 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgccgttcctggtggccgcgctctgcgccgggatcctggcaggggcgctccga
gtgcgggcccagcacagggagagagtgacctgcacacgcctttacgctgctgacatcgtg
ttcctacttgacggctcctcgtccatcggccgtggcaacttccgtgaagttcgaggtttc
ctggagggactggtgctgcccttctccggggcagccagtgcacagggcgtgcgcttcgct
gccgtgcaatacagtgacgaaccccggacagagtttggcctcgatgcccttggctcaggg
ggtgatgtgatccgagccatccgtgagctcagctacaaggggggcaacacgcgcacaggg
gctgcggttctccacgtggctgaccacgtcttcctgccccagctggcccgacccggtgtc
cccaaggtctgcatcctcatcacagatgggaagtcccaggacctggtagacacagctgcc
cagcggctgaaggggcagggggtcaagctgtttgctgtggggatcaagaatgccgacccc
gaggagctgaagcgagttgcctcacagcctaccagtgatttcttcttcttcgtcaacgac
ttcagtatcctgaggacactgctgccccttgtttcccggagagtgtgcacaactgcgggt
ggcgtgcccgtggccctgcctactgatgacttgacctctggtccccgagacctggtgctg
tctgaagcaggcagtcagtccttgagagtacagtggaccgcggccagtggcccggtgact
ggctacaaggtccagtacactcctctgacagggttgggacagccgctgccaagcgagcgg
cgggaggtgagcatccctgctggtgagaccagcacgcagctgcagggtctccggccactg
accgagtaccaggtgactgtggtagccctctacgccaatagcatcggggaggccgtgagc
gggacagcccggaccactgccctggaggggccagagctgaccatccagaataccacgacg
cacagcctcctggtggcttggcggagtgtgccgggtgccactggctaccgtgtgacatgg
cgggtcctcagtggcggtgtcacacagcagcaggagctgggccctgggcaggggtcagtg
ttgctgcgtgacctggagcctggcacggactacgaggtgactgtgagtggcctgctcggc
cggagtgttggggcggccacctccctgactgcccgcactgatgcctctgtggaacagacc
ctgcgcccggtcatcctgggccccacgtccattctcgtttcctggaacttggtgcctgag
gcccgtggctaccggctggaatggcggcgtgagagtggcttggggggaccacagagggtg
gtgctgccctctgatgtgacccgctaccagttggatgggctgcaaccgggcactgagtac
cgcctcacgctctacacgctgctggagggccgcgaggtggccacacctgccaccgtggtg
cccactgggccagggctgcccgtgggccctgtgacggacctgcaggcagccgagctgccc
gggcagcgggtgcgagtgtcctggagcccagttcccggcgccactgagtaccgcatcact
gtgcgcagtgcccagggggttgaacggaccctggtgcttcctggaagtcagacagccttt
gacttggacgatgtccgggctgggctaagctacactgtgcgggtgtctgctcgagtgggc
acccgcgagggtggcgccagcgtcctcacggtccgccgggaactggaaaccccacttgcc
atctcagggctacgagtcgtggcatcagatgcaacacgagtgagggtggcctggggacct
gttcctggagccggtggatttcggattagctggaggacagacagtggaccggagtccagc
cggacattgcccccagaaaccactgccacagatatcatggggctacggcctggaacctcc
taccaggtggccgtgtcagcactgagaggaagagaggagggtccccctgtggtcatcatg
gctcaaactgacccactgggcccagtgaggactgtccatgtgacgcagaccagcagctca
tctgtcaccatcgcctggaacagggttcctggtgccacaggatacaggatctcctggcac
tcaggccttggtccggagaaatcccagttggtttccggagaggccacagtggctgagctg
gatgggctggagccagatactgagtacacggtgcatgtgtgggcgcatgtggctggtgtg
gatgggacccccgcctctgtggttgtgaggacagaccctgcgcccgtgggcagtgtgtcg
aagcttcagatcctcaatgcttccagtgatgttctgcgggtcacctgggtgggggtcact
ggagccacagcctacagactggcctggggccgcagcgagggtggccccacgagacagcag
gtgctcccgggaaacacggactccgcagaaatacggggcctcgaaggcggagtcagctac
tcgttgcgagtgactgcactggtcggggaccgtgagggcgcgccagtctccattgtcgtc
actacgccgcctgaggctccgccagcactggagacccttcgcgtcgtgcagcgaggggag
cactcgctgaggttgcgctggcagccggtgcccggggcacagggcttccgtctgcgttgg
cgaccagagggtggccaggaacagtcccgggtcctggggcccgatctcagcagctacgaa
ctggatggtctagaaccagccaccctataccgcatatggctgagcgttttggggtcagct
ggagaagggccccccacagaagtgactgcacgcactgagtcaccccgtgtcccaagcact
gaactgcgtgtggtggacacttcaattgactcagtgactctggcctggactccagtgtct
ggagtatccagctacatcctgtcctggcaaccactcagacggcctggccaagacatccct
ggggcctcacagacacttccagggatctcgagctcccagcaggtgacagggctagagcct
ggcatcgcctacaccttctcgctgatacccatccaggagggtgtacggggtcctgaggcc
tctgtcacacagatcccaatgtgtccccatggcctgatggatgtggtgttcctgctgcac
accactcaggacaatgctcatcgtgcggaggctgtaaagcgagccctggagcgtctggtg
tctgcacttgggcctcttgggccacaggcggtccaggttggcctcctgtcctacagtcat
cggccctccccactgttcccgctgaatagctcctacgatcctggggtcatcctgcagaag
atccgcagcatcccctacgtggacccaagtgggaacaacctgggcaccgctgtggttact
gctcacagacacctgttagcaccggatgcccccgggcgccgccagcatgtacaagggata
atggttttgctagtagatgaacccttgagaggtgacatcttcaaccctatccgtgaggcc
caggctgctgggctcaaggtgatgatattgggccaggccggagctgacccagaacagttg
cgtcgcgtggtgccaggcatggaccctgtccagactttctttgctgtggatgatggtcca
agcttagagcaggcagtcagtagtttggcaacatccctgtgtcggataggctcggccacc
cagccacagccagagccttgcagggtgcattgtccagagggccagaagggggaacctgga
gagatgggcctgagaggacaagccgggcctcccggcccccccggccttccgggcaggatt
ggtgttcctggcccccagggccccccaggaagtaccgctgcaaagggcgaaaggggcttc
cctggggcagatgggcctccaggcagccctggccgccctgggactcctggaagccctggc
tcaaagggctctccagggtggcctggtcctcgtggagaaacaggagagcgaggacctcga
ggcccaaagggggagccgggagagcctggacgagtcattggaggcgagggcccagggctt
cctgggcagaaaggggaccctggacctccgggcctccctggatcccgtggcccactgggg
gacccaggaccccgtggtcccccaggacttcctggaatggccatgaagggtgacaaaggt
gatcgtggggagcggggccctccaggactgggtgatggcagcactgccccaggggagcct
gggctgccgggtcttcctggaagccccggaccccaaggaccagttggcccctctggagag
aaaggagaaaagggtgacagtgaggatggagccccaggcctcccaggacaacctgggagc
ccgggtgagcggggcttacgaggacctcctggagacattggccccaaaggtgacagagga
ctgaaaggggctgtgggtgaaactggagagaagggtgaacgtggatcccctggcccggtg
ggaccccaggggccgcctggagtggctggacgtcctggggctgaggggcccgaaggacca
ccaggacctgctggccgccgaggagagaagggggagcctggtcgccccggggaccctgca
gtgggacctgacggtgtcggggccaaaggagagaagggagatgtggggcccactgggccc
agaggagctgcaggaatcaaaggggagcggggcccacctggcttggttcttcctggagac
cccggccccaaaggagaccctggagaccggggtcccattggcctcaccggcagagcagga
cccccgggtgactcggggcctcttggagagaagggagaccctgggcggcctggccctcca
ggacctgtcggcccccgaggacgagatggtgaagttggagagaaaggtgacacgggcttc
ccgggtgacccaggttcgcctgggaaggctggcgagcgtggccttcggggggcacctgga
gctcgggggcctgtgggtgagaagggggaccaaggagatcctggagaggatggacgaaac
ggcagccctggaccatctggacccaagggagaccgtggggagccgggtcccccaggactc
cctggacggctggtagacccgggacttggagctggagagaagggagagcctggggaccgt
gggcaggagggtcctcgaggacccaagggtgacccgggtcccccgggagcctctggcgag
aggggtgtcagcggacttcgggggcccccaggccctcagggggacccaggtgtccgaggc
ccagcaggagagaagggtgaccggggtccacctggcctggatggccgcgttgggctagat
gggaaaccgggagcccctggcccccctgggctgcatggtgctacaggcaaagctggagac
ccagggagagacgggcttccgggcctccgaggagaacatggcccccctggcccgcctggc
ccccctggagcccagggaaggccgggagaggacgggaagcctggcctgaatgggaaaaac
ggagaacccggggaccctggagaaggtggaaagaagggagagaagggagattcgggcgcc
cctgggagagaaggtcacgatggtcccaagggtgagcgtggagctcctggtagccctgga
ctccagggccccccaggcctcccggggcaggtgggcccctctggccagggttttcctggg
gttccgggaaacacaggccccaagggtgaccgtggggagactggacccaaaggggaacag
ggcctccctggagagcgcggcctgagaggagatcctgggagcgtggggaatgtggagcgg
ttgctggaaactattggcatcaaggcgtccgccctgcgggagatcgtggagacctgggat
gagagttctggcagcttcctgcccatgcctgaccggcgccgtggccctaagggggagcca
ggcgagcggggccccccaggcaaggagggccccattggcttttctggagaacgcgggctg
aagggagatcgtggagaccccggccctcaggggccaccaggcctggccctgggggagagg
ggcccccctggaccgcccggccttgctggggagcctggaaagcctggcattcctgggctc
ccaggccgggctgggggcacgggggaggcaggaaggccaggagagaggggagaacgggga
gagaaaggagaacgtggagaacagggaagagacggccctcctggcctccctggacctccc
ggcgccccaggtcccaaggtggctgtggaagagccaggtcctggtctctctggagtgcaa
ggaccccctggattcaagggcgcaaagggggagccaggcagtgacggtgaccgaggcccc
aagggagacaggggtgtgccaggcctcaagggagaccagggagagcccggacagaggggt
ctcaatggcagcccgggcctaccaggagagcgtggtgtggctggacccgaagggaagccg
ggtttgcaaggtccgagggggacccctggcccagtgggtggccatggagaccctgggcca
cccggtgccccgggtcttgctggccccgcaggaccccagggtccttctggcctgaagggg
gagcctggagagacaggaccaccagggcggggtctgcctggacccacgggagctgtggga
cttcctggccctcctggcccctcaggcttggtgggtcctcagggggcgccaggtttgccg
ggacaagtgggggagacaggaaagccgggagccccaggtcgtgatggtgccggtggaaaa
gatggagacagaggagctcctggcgtgccggggtcaccaggtgtgcccggccctgttgga
cctaaaggagagcctggacccatgggggctcctggacaggctgtggtcgggctccctgga
gcaaagggagagaagggagcgcctggaggcctcgtgggagacctgctgggagagccgggg
gccaaaggtgaccgaggactgccagggccccggggtgagaagggtgaagctggccgtgcc
ggggagcctggagaccctggggaagatggtcaaaaaggggctcctggactcaagggtaat
aagggtgacccaggagttggggtccagggcccccctgggccagctggtcctctaggtctg
aagggagatgtgggcccccctggcccccccggtgctcctggtgttgtcggattccctggt
cagacaggccctcgaggagagatgggtcagccaggacccagcggagagcggggtctggca
ggtctcccagggagagagggtgccccaggtgccttggggccacctggaccaccagggtca
acgggagctcccggaatctctggactcaaaggagacaagggagaccctggagcaggtctg
cctggggcccgcggcgagcgtggggagcgtggggagccaggtgtccggggtgaagatggc
cgtcctggccaggagggaccccgaggactcatggggcccccaggcagccggggtgagcgt
ggggagaagggtgatgctggagcctcagggctaaagggtgacaagggtgatgcagccatg
gctgtggggcctccagggccacggggtgccaagggggacacgggccagcaagggcctccg
ggcatagatggtgacaaaggacctcgtggagacaacgggaaccctggagagaagggcacc
aaaggagagcctggtgacaagggttcagccgggttgctgggagctcgtggactcacagga
cccaagggtgagcctggcaccgcagggatcccaggtgacccgggaaccccaggaaaggat
ggagcccctggtgtccgaggagacaaaggagattctggcttcatgggtccccggggcctc
aagggtgagcgagggataaagggagcctgtggcctcgacggagagaagggagataaggga
gaagctggtcccctgggccgccctgggctggcaggacgcaagggagatatgggggagccg
ggggtgccaggccaggcgggggcccctgggaaggagggcctcatcggtcccaagggtgac
agaggctttgatgggcagccaggatccaagggtgaccagggcgagaaaggggagcggggg
cccccaggaattgggggcttcccaggtcctaggggcagtgatggctctagtggtccccct
gggccacctggcagtgttggtcccaaaggccccgaaggacttcagggccagaagggtgag
cgaggcccccctggagagagagtggtgggtgcccctggagcccctgggacccctggagag
agaggagagcaggggcggccagggcccgctggcccccgcggggagaagggagaagctgca
ctgacagaggatgacattcgaggctttgtgcgtcaggagatgagtcagcattgcgcctgc
cagggccagttcatcgcatctggatcacgacccctccccagttatgctgcagacactgcc
ggcccccagctccaccctgtgcctgtgctccgggtttctcacgcggaggaggaaggcctg
gtgccccctgaggacgacgagtacgaatactctgagtactccgtggaggaataccaagac
cctgaagctcctcgggaaggtgatgacccctgcttgcttccactggacgagggctcctgt
gctgcctacaccttgcgctggtaccatcgggtggtggcagatggcacagaggcttgtcac
ccctttgtctatggtggctgtggagggaatgccaaccgtttcgggacccgtgaagcctgt
gagcgccgctgcctgcccagcgtggtccagaaccagggaacaggtgctgcccggagctga
DBGET
integrated database retrieval system
