Zalophus californianus (California sea lion): 113918838
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Entry
113918838 CDS
T07874
Symbol
RNF13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zca04121
]
113918838 (RNF13)
Enzymes [BR:
zca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113918838 (RNF13)
Ubiquitin system [BR:
zca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113918838 (RNF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
DUF7027
Prok-RING_4
Neur_chan_memb
zf_RING_Vps8_fungal
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
113918838
NCBI-ProteinID:
XP_027443508
UniProt:
A0A6J2CIE8
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All DBs
Position
1:104606780..104762597
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AA seq
381 aa
AA seq
DB search
MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYNFENASQTFDDLPARFGYRLP
AEGLKGFLINSKPENACEPIVPPPLKDNSSGTFIVLIRRLDCNFDVKVLNAQRAGYKAAI
VHNVDSDDLISMGSNDIDVLKKIDIPSVFIGESSANSLKDEFTYEKGGHIILVPEFSLPL
EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVC
AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQ
EENEVSEHTPLLRPLASVSTQSFGALSESRSHQNMTESSDYEDDDNEDTDSSDAENEINA
HSVVVQLQPNGERDYNIANTV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctccatagggatgctcatgctgtcggccacacaagtctataccatcttgact
gtccagctctttgcattcttaaacctactacctgtagaagcagacattttagcatataat
tttgaaaatgcatctcagacatttgatgaccttccagcaagatttggttacagacttcca
gctgaaggtttaaagggttttttgattaactcaaaaccggagaatgcctgtgaacccata
gtgcctccaccactaaaagataattcatctggcactttcatcgtgttaattagaagactt
gattgtaattttgatgtaaaggttttaaatgcccagagagcaggatacaaagcagccata
gttcacaatgttgactctgatgacctcattagcatgggatccaacgacattgatgtgcta
aagaaaattgacattccatctgtctttattggggaatcatcagctaattccctgaaagat
gaatttacatatgaaaaagggggccacattatcttagttccagaatttagtcttcctctg
gaatactatctaatccccttccttatcatagtgggcatctgtctcatcttgatagtcatt
ttcatgattacaaaattcgtccaggacagacatagagctagaagaaacagacttcgtaaa
gatcaacttaagaaactccccgtacataaattcaaaaaaggagatgagtatgatgtatgt
gccatttgtttggatgaatatgaagacggagacaagctcagaatccttccttgttcccat
gcttaccactgcaagtgtgtagacccctggctaactaaaaccaaaaaaacgtgtcccgtc
tgcaagcaaaaagttgttccttctcaaggcgattcagactctgacacagacagtagtcaa
gaagaaaatgaagtgtcagaacatacccctttacttagacctttggcttctgtcagcacc
cagtcatttggggctttgtcggagtcccgctcacatcagaacatgacagaatcttcagac
tatgaagatgacgacaatgaagataccgacagtagtgatgcagaaaacgaaattaatgca
catagtgttgtagtccaactgcagcctaatggtgaacgggattacaacatagcaaatact
gtttga
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