Zalophus californianus (California sea lion): 113918881
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Entry
113918881 CDS
T07874
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113918881 (MEX3D)
04121 Ubiquitin system [BR:
zca04121
]
113918881 (MEX3D)
Enzymes [BR:
zca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113918881 (MEX3D)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
113918881 (MEX3D)
Ubiquitin system [BR:
zca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113918881 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
zf-RING_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
KH_DEAH11_2nd
Motif
Other DBs
NCBI-GeneID:
113918881
NCBI-ProteinID:
XP_027443579
UniProt:
A0A6J2CIL9
LinkDB
All DBs
Position
1:complement(955578..964308)
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AA seq
668 aa
AA seq
DB search
MPGSTGQPDGGGGDPSPRPPPPPPPPPPPPPLPEGAEEEAAPDDAAAAAALRLALDQLSG
LGLGGAGGPDEEGTAAGSGDGAAAVAAGGADGGAAAEPAPPDGPEAGAPAVAEAVAPASL
ALLEPDVSPPPPPPPPPPPPRQSPPDVFAGFAPHPAALGPPTLLAEQMSVIGSRKKSVNM
TECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKRE
ILSAAEHFSVIRATRSKAGGLPGAAQGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRI
QQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEIEAHITLRTGSFTDSGPDSDFHANGT
DVCLDLLGTAAGLWAKAPNPGRRPPAPTAGLRGDGTLGGPGGPEAFYAGGRGGPPVPDAG
PASPYGGSGNGGFTFGGDGAGAPSGPPAPEDCDFGFDFLALDLTVPAAATIWAPFERAAP
LPAFSSCSAVNGAPAPPAPGARRSSGAGTPRHSPTLPEPGGLALELPLARRGAPDPVGAL
AWRPAQGALSSFSSGAGFSAATSLPSGSSASACPPLDSSASEGGRKPPAAASSAAPTPAA
PAPALARECVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIRVET
AARWHLSS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctccaccggccagcccgacggcggcggcggcgaccccagcccgcgccccccg
cccccgcccccgcccccgccgccgcccccgcccctgcccgagggcgcagaggaggaggcc
gcgcccgacgacgcggctgccgccgccgcgctgcgcctggcgctggaccagctctcgggg
ctggggctggggggcgccggcggcccggacgaggaggggacggccgcgggcagcggggac
ggcgcggcggcggtggcggcgggcggagcggacggcggggcggcggcggagcccgcgccc
cccgacgggccggaggcgggcgcgcccgcggtggccgaggccgtagcgccggcctcgctg
gcgctgctggagcccgacgtgagcccgccgccgccgccgccgccgccgccgccgcctccc
cggcagtcgccgcccgacgtgttcgccggcttcgcgccccaccccgcggccctgggcccc
ccgacgctgctggccgagcagatgagcgtgatcggcagccgcaagaagagtgtgaacatg
accgagtgcgtgcccgtgcccagctccgagcacgtcgccgagatcgtgggtcgccagggg
tgcaagatcaaggctctgcgtgctaagacaaatacgtacatcaagacgccggtgcgcggg
gaggagccggtgtttatcgtgactggccgcaaggaggacgtggagatggccaagcgtgag
atcctgtccgccgccgagcacttctccgtgatccgcgcgacgcgcagcaaggccggcggg
ctgcccggcgccgcgcagggtccgcccaacctgccgggacagaccaccatccaggtgcgc
gtgccctaccgcgtggtggggctggtggtggggcccaagggcgccaccatcaagcgcatc
cagcagcggacgcacacgtacatcgtgacgcccgggcgcgacaaggagcccgtgttcgcc
gtgacgggcatgcccgagaacgtggaccgggcgcgcgaggagatcgaggcgcacatcacg
ctgcgcacgggctccttcaccgactcgggccccgacagtgacttccatgccaacggcact
gacgtctgtctggacctgctcggaacggccgccggcctctgggccaaggcccccaaccct
gggcggcggccccccgcgcccacagcaggcctccgcggggatgggaccctggggggcccc
ggggggcccgaggccttctacgcggggggccgcggggggccgccggtgcccgatgcgggc
cctgccagcccctacggaggctcgggcaacgggggcttcaccttcggcggggatggtgcg
ggggccccatcggggccgcccgcccccgaggactgtgacttcggcttcgacttcctggcg
ctggacctgaccgtgcccgccgcggccaccatctgggccccctttgaacgggccgcgccg
ctgccggcctttagcagctgctcggccgtcaacggggcccccgcgccacccgcccccggc
gcccggcgcagcagcggggccggcacgccgcgccactcgcccacgctgcccgagcccggg
ggcctggccctggagctcccgctggcccgccgcggcgccccggacccggtgggcgccctg
gcctggcggccggcgcagggcgccctgtcatccttctccagcggcgccggcttctccgcg
gccacctcgctgcccagcggttcctcggcctctgcgtgtccccccctggactccagtgcc
tccgagggcggccgcaaacccccagcggccgcgtcttcggccgccccgacccccgctgcg
cccgccccggctctggcgcgggagtgcgtggtgtgcgcggagggcgaggtgatggccgcg
ctcgtgccctgcggccacaacctcttctgcatggactgcgccgtccgcatctgcggcaag
agcgagcccgagtgcccggcctgccgcacgcctgccacccaggccattcgcgtggagacg
gctgcccgatggcatctcagttcttaa
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