Zalophus californianus (California sea lion): 113919369
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Entry
113919369 CDS
T07874
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
113919369 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zca01009
]
113919369 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zca04515
]
113919369 (PCDH9)
Protein phosphatases and associated proteins [BR:
zca01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113919369 (PCDH9)
Cell adhesion molecules [BR:
zca04515
]
Cadherins
Protocadherins
113919369 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_2
RCR
V_ATPase_I
DUF6249
Big_9
EphA2_TM
7tm_3
MAP17
Baculo_11_kDa
DUF6377
Motif
Other DBs
NCBI-GeneID:
113919369
NCBI-ProteinID:
XP_027444104
UniProt:
A0A6J2CIE9
LinkDB
All DBs
Position
3:38996669..39915028
Genome browser
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFITVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHSKSD
NIPVTPQKCPSSAGFHIQENEESHYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGS
NEGHFNNGSHMTDIPLANLKSYKQAGGTIESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaactgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacggggaccagtgcc
agcctcgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagt
agcactggggaaattttcacaacctccaatagaatagacagagaaaaactctgtgctgga
gcctcttatgctgaggagaatgagtgtttctttgaacttgaggtagtgatcctccccaat
gattttttcaggctgatcaaaataaaaataattgtcaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaattccatcggcaacagatcctgatacaggcttcaatggtgtacagcactatgaa
ttgctaaatgggcagagtgtttttgggctggatatcgtggaaactccggagggagagaag
tggccacaattgattgttcagcaaaacttggacagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcactccacagaaatccagcacggccatactgcaggtc
acagtaagtgatgtaaatgacaacaggccagtgtttaaagagggtcaagtggaggtgcac
attccagagaatgctcctgtaggcacctctgtaattcagctccatgccactgatgcagat
ataggcagtaatgctgaaatccggtacatttttggtgcccaggtcgcccctgcaaccaaa
agactctttgctttaaataatactactgggctgattacagttcagaggtccttagatcga
gaggagacagccattcacaaagtgacagtgctggctagtgatggcagctccacccccgct
cgagcaacggttaccatcaatgtcactgatgtcaatgataaccctcctaacatagacctc
aggtacatcataagtcccataaatggcacagtgtatttatctgagaaagaccctgtcaat
acaaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatttgaaggcagtgtacgacaaccaatatttg
ttagagacctcctctttgttggactatgagggcaccaaagaattcagctttaaaattgtg
gcctccgattccgggaagcccagtttaaatcagactgccctggtaagggttaagcttgag
gacgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgctacagatgaagacagtgggaaa
aatgcggacattgtttatcagcttgggccgaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcctccagagtctttgacagagaagaacaagaacgattcattttt
acagtaactgccagggacaatgggacccctcccctccaaagccaagcggctgtgatagtt
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggagagaataaagctgtgactctttccattctaaatgacaatgataattttgtgttg
gatccctattctggagtcataaagtcaaatgtctcatttgatagagagcagcagagttcc
tatacttttgatgtcaaagccactgacggaggacaaccaccccgctcctctactgcaaaa
gtcaccatcaatgtcatggacgtcaatgacaatagccctgttgtcatttctccaccttcc
aacacttctttcaagttggtgcccctctcggccattcctggctctgtggtagcagaagtt
tttgcagtggacattgacactgggatgaatgctgaactgaagtatacaattgtgagtggg
aacaacaaaggcttgtttcggattgatccagtaacaggtaacatcactctggaagaaaag
ccggcacccactgacgtgggtttgcaccgtctggtggtcaacataagtgacctggggtac
ccgaagtctctgcacacgcttgtgcttgtttttctctacgttaacgacactgctgggaat
gcctcctatatctatgacttgattcgcaggactatggagaccccactggacaggaacata
ggggacagtagccaaccctatcaaaacgaagactatctcaccatcatgattgccattgtt
gcaggtgccatggtggtcatagtcgtgatcttcatcaccgtcctggtgcgctgtcgccat
gcatcccggttcaaagcagctcagaggagcaagcaaggtgctgaatggatgtccccaaac
caggagaacaaacaaaacaagaaaaaaaaaaggaagaaaagaaagtctcccaagagctct
cttttgaactttgttacaatcgaagagtccaaacctgatgatgcagttcacgaacctatc
aatgggaccataagcctgccggctgagctggaggagcaaagtataggaagatttgactgg
ggcccagcccctccaacaaccttcaagcctaacagccctgacctggccaagcactacaaa
tcggcttctccacagcctgcttttcatcttaaaccagacactccagtttccgtgaaaaag
catcatgtgattcaggaactccctttggacaacacctttgtcgggggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctctgcgggtttccacattcaggagaat
gaagaaagccattacgagtcgcagcgccgcgttacgtttcacctccccgatggctcccag
gaaagctgcagtgacagtggtctaggagaccacgagccggtgggtagtggcaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctacgaccaggcctctccggac
aagaggactgaagcagatggcaactctgaccccaactctgatgggcctttgggtccccga
ggattagctgaagctacagagatgtgcactcaagagtgcttggttttgggtcactctgat
aattgctggatgcctcctggcttgggtccatatcaacaccctaaatctcctctctcaacg
tttgcaccccagaaagaatgggtcaagaaggacaagcttgtgaatgggcacacccttacc
agagcctggaaagaagatagcaacaggaaccagttcaatgaccgtaagcagtatggctcc
aatgaaggccatttcaacaatggcagccacatgacagacattcctctggcaaatctgaag
tcttataagcaagcaggaggtactattgagagtccgaaggagcaccaactctaa
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