Zalophus californianus (California sea lion): 113919430
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Entry
113919430 CDS
T07874
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04136
Autophagy - other
zca04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113919430 (ATG4B)
04136 Autophagy - other
113919430 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zca01002
]
113919430 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113919430 (ATG4B)
03029 Mitochondrial biogenesis [BR:
zca03029
]
113919430 (ATG4B)
Peptidases and inhibitors [BR:
zca01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
113919430 (ATG4B)
Membrane trafficking [BR:
zca04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
113919430 (ATG4B)
Mitochondrial biogenesis [BR:
zca03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113919430 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
113919430
NCBI-ProteinID:
XP_027444297
UniProt:
A0A6J2CNM0
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All DBs
Position
3:194972213..194997014
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AA seq
442 aa
AA seq
DB search
MADVPFLPHFRPRPRPRPLGPDWPRQRPVASRCGTVGATPLSVGGRRRKMDAATLTYDTL
RFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTG
WGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQM
GVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSALAVHIAMDNTVVMEDIRRLCRGSLPCAG
AAALPPDSSRHCNGFPAGAELTNRPAPWRPLVLLIPLRLGLTDINEAYVETLKRCFMMPQ
SLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEFTDSCFIPDESFHCRHPPSRMSIG
ELDPSIAVGFFCKTEDDFDDWCRQVRQVSLLGGALPMFELVEQQPSHLACPDVLNLSLDS
SDVERLERFFDSEDEDFEILSL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgcccttcctcccgcacttccggccccgcccgcgccctcgccctctaggc
ccggattggccccggcagcggcccgtcgcgtcgcgctgcggaaccgtcggagcgacgccg
ctctcagtcggcggccggagacggaagatggacgcagctactctgacctacgacactctt
cgatttgctgagtttgaagatttcccggagacctcagagcctgtgtggatactgggtaga
aaatacagcattttcacagaaaaggatgagatcttgtccgatgtggcatccagactttgg
tttacatacaggaaaaacttcccagccattgggggcaccggccccacctcggacacgggc
tggggctgcatgctgcggtgtggacagatgatctttgcccaggccctggtgtgccgccat
ttaggccgagactggaggtggacacagcggaagaggcagccggatagctacttcagtgtc
ctcaacgctttcatcgacagaaaggacagttactactccattcaccagatagcacaaatg
ggagttggcgagggcaagtccatcggccagtggtacgggcccaacaccgttgcccaggtg
ctcaagaaactggctgtcttcgacacctggagcgccttggcagtccacatagcaatggac
aacacggtggtgatggaggacatcagaaggttgtgcagaggcagccttccgtgtgcgggg
gccgccgcgctccccccggactccagccggcactgtaacggcttccctgcgggagctgag
ctcaccaataggccggcaccgtggagacccctcgtgcttctcatccccctgcgcctgggg
ctcacggacatcaacgaggcctacgtggagaccctgaagcgctgcttcatgatgccccag
tccctgggagtgattggagggaagcccaacagtgcccactacttcatcggctacgttggt
gaggagctcatctacctggaccctcacacgacgcagccagcggtggagttcaccgacagc
tgcttcatcccggacgagagcttccactgccggcacccgccgagcaggatgagcatcggg
gagctcgacccgtccattgccgtggggttcttctgtaagactgaggacgactttgatgac
tggtgccgacaagtcagacaggtgtcgctgctcggaggcgccctgcccatgtttgagctg
gtggagcaacaaccttcgcacctggcctgtcccgacgtcctgaacctgtccttagactct
tctgacgtagagcgattggaaagattctttgattcagaagatgaagactttgaaatcttg
tctctttga
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