Zalophus californianus (California sea lion): 113919510
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Entry
113919510 CDS
T07874
Symbol
ZSWIM8
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zca04121
]
113919510 (ZSWIM8)
Ubiquitin system [BR:
zca04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
113919510 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
113919510
NCBI-ProteinID:
XP_027444668
UniProt:
A0A6J2CRF2
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Position
15:34457763..34472198
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AA seq
1834 aa
AA seq
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MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGSGGTRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCAQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE
ACYFNWEEAYPLPGVTYSGTDRKLALCWARALPPRPGACRSGGLEESRERPRALPSEPAV
RPKEPGAKRKGLGEGVPSLQRGPRRLSAEGGDKALHKMGPGGGKAKALGGAGSGGKGSAG
GGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPPPGGSRGPSTFL
PEPPDTYEEDGGVYFSEGPEPPTGSAGPCGLLPGEVCTRDDLPSTDESASGLPKTKEAAT
AVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEVLFACAEAL
HAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAFL
LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGPSEMS
TMRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNNEMPGDEEL
GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRE
SQTHKPQTLSSFYSSSRPATASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPG
PTEGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS
SGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAR
EGATSCSAGGIRAAGEAGRGLPEGRGGPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGP
GLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPA
FLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVALSSVHPASTFPA
IQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLALEMLGRRAH
NDHPNNFSRSPPYTDDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIVMETLQRL
SPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPM
GMMQFNDILQNLKRSKQTKELWQRVSLEMTTFSP
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgcggaatgggaggacggagagcgcttttcattcgaagattcggac
cgctttgaggaggattcgctctgttccttcatctccgaggccgagagcctctgccagaac
tggcggggatggcgcaaacagtccgcggggcccaattcccccactggcggcggtggcgga
ggtggcagtggcggtaccagaatgcgagatggactggtgatcccattggtggagctatca
gcaaagcaggtggcatttcatatcccatttgaagtggtggagaaagtttatcccccagtg
cctgagcagctacagctccgaattgctttttggagcttccctgagaatgaagaggatatc
cggctgtattcatgcctcgccaacggcagtgcagatgagtttcagcgaggggatcagctg
ttccgcatgagggctgtgaaagacccgctgcagatagggttccacctgagtgctacagtg
gtgccacctcagatggtcccccccaaaggggcctacaacgtggctgtgatgtttgaccgc
tgtcgggtcacttcctgcagctgcacctgtggggctggggccaaatggtgcactcacgtc
gtggcactctgtctcttccgcatccacaacgcttctgcagtctgcctgcgtgcccccgtc
tcagaatccctgtctcggctgcagagggaccagctgcagaagtttgctcagtacctcatc
agtgagctccctcagcagatcctccccacagcccagcgtcttctggatgaactcctctct
tcccagtcaacagccatcaatacggtgtgtggggcccccgaccccacagcagggccctcc
gcctctgaccagagtacctggtatttggatgaatcgacactcaccgacaacatcaagaag
acactgcacaagttctgtggaccctcgcctgtggtcttcagtgatgtgaactccatgtac
ctctcttccacggagcctccagctgctgctgaatgggcatgtctgctgcgccctctgagg
ggccgcgagccagagggtgtctggaacctgcttagcattgtgcgggagatgttcaaacgg
agggacagcaatgctgcccccttgttggaaatcctcaccgaccagtgcctcacctatgag
cagataacaggttggtggtacagcgtgcgcacgtccgcctcacacagcagtgccagtggg
cacacgggccgtagcaatgggcagtcagaggtggcagcccacgcgtgtgccagcatgtgt
gacgagatggtcacgctgtggaggctggctgttttggaccctgcactcagcccccagcgc
cgccgggaactgtgtgcgcaactacgccagtggcagctgaaggtgattgagaacgtgaag
cggggacaacacaaaaagaccctggagcggctcttccctggcttccggccggcggtggag
gcctgctacttcaactgggaagaggcctacccacttcccggtgtcacctacagcggcact
gaccggaagctggcgctgtgctgggcccgggccctgccgcctcggcccggcgcctgccga
tctgggggcctggaggaatcccgggagcggccccgagctcttccttctgagcccgctgtg
cggcccaaggagcctggggccaagcgcaagggattgggtgagggggtcccctcgttgcag
cgggggccccgccgcctctctgctgaggggggagataaggctctgcataagatgggtcca
ggtgggggcaaagccaaggcactgggtggggctggcagtgggggcaagggctcagcaggc
ggtgggagcaagcggcggctgagcagtgaagacagctccctggagccagacctggccgag
atgagcctggatgacagcagcctggccctgggtgcagaggccagcacctttggtggattc
cctgagagcccgccaccctgccctcctcccggtggctcccgaggtccttccaccttcctt
cctgaacccccagatacttacgaagaagatggtggtgtgtacttctctgaagggcccgag
cctccaacaggctctgcgggcccctgtggcctattgcctggggaggtctgtacccgggac
gacctcccttccacagatgagagtgccagtgggctccccaaaaccaaagaggcagccacc
gcagtcggagaggaggatgatgactaccaggcatattatctgaatgcccaggatggggct
gggggcgaggaagagaaggccgagggcggggccggggaggagcacgacctgtttgccggg
ctgaagccactggaacaggagagccgcatggaggtactctttgcctgtgctgaggccctg
catgcacatggctacagcagtgaggcctcccgcctcaccgtggagcttgcccaggacctg
ctagccaacccacccgacctcaaggtagagccgccccctgccaagggcaagaagaacaag
gtatctacgagccgtcagacctgggtggctaccaacaccctgaccaaggcagccttcctg
ttgacagtgctaagtgagcgtccagagcaccacaacctggccttccgagttggcatgttt
gccttggagctacagcggcccccagcttctaccaaggccttggaggtgaagctggcatac
caggagtctgaggtggctgccctgctcaagaagattcctctgggtccgagtgagatgagt
accatgcggtgccgggcagaggagcttcgggaggggacgctctgtgactatcggcccgtt
ttgcctctcatgttggccagtttcatctttgacgttctctgtgctccagtggtttctccc
acgggttcgcggcctccgagtcgtaactggaacaacgagatgcctggggatgaggagctg
ggatttgaagcagcagttgctgccttaggtatgaagacaacagtgagtgaggcagagcat
cccctgctgtgtgaaggcacacgtcgggagaagggtgacctggcactagcactaatgatc
acttacaaggatgaccaagccaagctcaaaaagatcttagacaaactgttggaccgagag
agccagacgcataagccccagacactgagttcgttctactcatccagccgcccagccaca
gccagccagaggtctccctcaaagcatgggggcccatctgccccaggggccctgcagccg
ctgacctcgggctctgcagggcctgctcagccagggagtgtggcaggggctgggccaggc
cccactgagggcttcacagagaagaatgtgcctgaaagttccccacattctccttgtgag
ggtctcccatctgaggcagctttgaccccaaggccagaagggaaggttcccagccgcctg
gcacttggcagtcgtggaggctacaatggccggggctggggctccccagggcggcctaag
aagaaacacacaggcatggccagcatcgacagcagtgcccctgaaaccacgtcggatagc
tcccccaccttaagccggaggccacttcgagggggctgggcccccacctcctggggccga
ggacaggacagtgacagcattagcagctcttcctcggactctctgggctcctcgtcgtcc
agtggaagtcgccgggccagtgccagtggaggggcccgggcaaagaccgttgaagttggc
aggtacaagggccgccgtcccgagagtcatgccccccatgtacccaatcagccatcagag
gcggctgcacacttctacttcgagttggcgaagacggtgctgatcaaggcagggggcaac
agcagcacttccattttcacacatccatcttcctcagggggccaccagggtcctcaccgc
aacctgcatctttgcgccttcgagattgggctttatgcccttggcctgcacaactttgtt
tctcccaattggctgtcacgtacttattcttcccacgtttcctggattacaggtcaggca
atggagattggcagtgcagctctgactatactggtagaatgctgggatggacacctgaca
ccccctgaggttgcatccctggctgacagggcgtcacgggcacgagactccaatatggtg
agggcagcagcggagctagccctgagctgcctgcctcatgcccatgcattgaaccccaat
gagatccagcgggccctggtgcagtgcaaggagcaggataacctgatgctggagaaggcc
tgcatggcggtggaagaggcggccaagggtgggggtgtataccccgaagtgttgtttgag
gttgctcaccagtggttctggctctatgagcagacagcaggtggctcatccacagcccgt
gaaggggctacaagctgtagtgccggtgggatcagggcagctggggaggctgggcggggg
ctgcctgagggcagggggggcccagggactgagccggttacagtggcagcggcagcagtg
acagcagcagccacagtggtgccagtcatctcagtggggtctagtttatatccaggtcca
ggactggggcatggtcattcccctggcctgcacccctacactgctctacagccccacctg
ccctgcagccctcagtacctcacccacccagctcaccctgcccacccaatgcctcatatg
ccccggcctgccgtcttccctgtgcccagctctgcgtacccacagggtgtgcatcctgcc
ttcttgggggctcagtacccttactcagtgactcccccctcacttgctgccactgctgtg
tctttccccgtcccttccatggcacccatcacagtacatccctaccacacagagccaggg
ctcccactgcccaccagtgtggccttgagcagtgttcatccagcatccacgtttccagcc
atccagggtgcctcgttgcctgccctgactacacagcccagccctctggtgagcgggggg
tttccaccacccgaggaggagacacacagtcagcctgtcaacccacacagcctacaccac
ctgcacgctgcctaccgtgttggaatgctggcactggagatgctgggtcgccgagcacac
aatgatcaccccaacaacttctcccgctcccccccctacactgatgatgtcaaatggttg
ctggggctggcagcaaagctgggagtgaactacgtgcaccagttctgtgtgggggcagcc
aagggggtgctgagcccgtttgtgctgcaggagatcgtcatggagacgctgcagcggctg
agccctgctcatgcccacaaccacctgcgtgccccggccttccaccaactggtgcagcgc
tgccagcaggcatacatgcagtacatccaccaccgcttgattcacctgacccctgccgac
tacgacgactttgtgaatgcgatccgcagtgcccgcagcgccttctgcctgacacccatg
ggcatgatgcagttcaacgacatcctgcagaacctcaagcgcagcaaacagaccaaggag
ctgtggcagcgggtctcactcgagatgaccaccttctccccatga
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