Zalophus californianus (California sea lion): 113919659
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Entry
113919659 CDS
T07874
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
KO
K11138
telomere-associated protein RIF1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
113919659 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zca03032
]
113919659 (RIF1)
DNA replication proteins [BR:
zca03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
113919659 (RIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rif1_N
NICE-1
Motif
Other DBs
NCBI-GeneID:
113919659
NCBI-ProteinID:
XP_027444942
UniProt:
A0A6J2CQI7
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All DBs
Position
3:117269861..117333436
Genome browser
AA seq
2473 aa
AA seq
DB search
MTAPGESPLAPLLETLEDPSAPHGEQTDAYLTLTSRMTGEDGKEVIMEIEKKLPQLFRLL
KIHISSQNSDLSSAALQALGFCLYNPKITSGLSETDIQELLLKLNDSVKSPDKNVRTRAL
WVISKQTFPAEVIGSVVSSVIDSLEIVFNRGEVHSAVVDYEALNVIIRLIEQAPVQMGEE
SVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLLSELQKL
FMSKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPEILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLLRLGPHLPANFEQV
CVPLIQSTISIDSNASSQGSSSRVTASPGLSPMTPIHKGPSPYGTPVTPRMNLSSNFGGM
ATIPSIQLLGLEMLLHFLLGPEVLSFAKQNKLVLSLEPLEYALISSSSFFSKHANTLITA
VHDSFVAVGKDASDAVVNAIWKELISLMKSVIESGNRKERPGSEVLTLLLKSLESIVKSE
VFPVSKTLVLMEVTIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNNLLEYGVDD
ERFFLNLETLVGCVLSGPTSPLAFSDSVLNVINQNAKLLENKEHLWRMWGIIVTPLTELI
NQTNEVNQGDALEHNFSAIYGALTLPINHIFSVQKFPVATMKTLLRTWSELYRAFARCAA
LVATAEENLCCEELASKIMSSLEDSGFSNLLFLDRIIHIITVMVDCIDFSPYNIKYQPKV
KSPQRPSDWSKKKKEPLGKLASLFKLTVRVIYSFHTLSFKEVHSDTLLTVGNSITSILSN
VLGRISLPSMIRKIFATLTRPLALFYENLKLDEVPKVYSCMSNKLEKLLGEIITCLHFSY
TGTYDSELLEYISPLLCIIFLHRNKQIRKQSAQFWNATFAKVSTLTYPEELKPVLRQAKQ
KFLLLLPGLENVEIMEESSGPYSNATENSQLNMKISGMERKSSGKRDSFLAQTKDAKENK
KPPVKLKLESSSTKTKSEMPLEEEKSVDFVFIPPEGKETKERILTEHQKEVFKTKRYDIP
VMYNNLDVSQDTLFSQYTQEESMEIPAVTEKSKEDSKEEQMESDIVISQDVTGNCGMDEH
LEKASLSNNDCGSNGETSPEVPSSNNDARKKPLISSKKTTECASNAENTSGLNSSSVSNT
IISGTPPQPTSRRQTFITLEKFDGSENRPFSPSPLNNMSSTVTVKNNQEVMGKTDTPPKA
KKREMVFAKCDSEKIAHGIKRSSRRSSKAEQIGNKRSKLLMRSDQEKNTQESIDGTVVLE
NNPPGLLNQTECVLDNQVHLSESMMEYEDTMLKPTIENVVVVENNTVEEKTLGINLESKE
NTPPATIPADQMIDEDSPVQITPNQKTLRRSSRRRSEVAEPTTDSQEKENNQKKERRKEE
EKTLQKSLLHVKDDVLPKQKVISEQTVQEHLIEKGNNVHEKTFGETSTTAEIDESKRKLD
LENIKSEGDGAQDFADKSSEKPVSGRTRYQTRRASQGLLSSIENSESDSSEAKEEGSKKK
RSGKWKNKSSDSVDIEDQEEKVIKQECVNVENQTLDCKANSEVERDLKSQICEQKDEINN
VTLEDSTVSSDLLQVSDDMSTTYEGKSKTSKCTEYSFSNPSVPESNLRTRNASKRLQKRD
SIENNTVGESSKIGTSDILLSEKTFQTLECQHKRSRRVRRSKGCDCCGEKSQPQEKSFIG
LKNTENYDVKVNETKKTDTQTPVNVSETSKANLCSELKLSDEHNGVNFHLGLKEESAAVN
DSLIVSESELKEITIQNPLPSEVVNFEEETCDMDSEEATPLESQEPSNKKCKTVSPCLGD
SKDNSLEYSTLETKEEKSEAVLEKELSIENIVSVETVGCKAKAKFNPEVEAVELDVESDK
SEASFSEQKSTETGVSEEEVMEINSERSDESEAEAAEKLKAEEAVTEEFNSGLGHSDNTT
EMSAQVEIPEQTAVGELDERSDKSNPGSSEEMNAEMENCEETVMGEVSAEADQVSETEDR
DSTTKISTQPVQADTKTSTMEIGGFVLSRLGMSTEEGKVDSNETEANTELNKSEETTSDD
NQMVGGNDEILQEVHHTSEKVEETPESLTSETAISELITEDNNASPQKLRELDPLLVSAN
GSPSGMQTRCVWSPLASPSTSILKRGLKRPQEDEISSPVHKVRRVSFADPIYQAGLADDI
DRRCSIVRSHSSNNSPIVKSVKTSPTAQSKHNATSIKGFLSPGSRSPKFKSSKKCLITEM
AKESMPCPTESVYPALVNCVAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTAS
EIKTLPIRSPKVSNVKKALRVYHEQQVKSRGLEEIPVFDISEKTVNGIQTKSLPSDEERL
ASDLIDPVALETPLPKNLVAQISALALQLDSEDLHNYSGSQLFEMHEKLGSMANSIIKNL
QSRWRSPTHENSV
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccgggtgagagccccctggcgccgctgttggagactttggaagacccttcc
gccccccatggagagcaaaccgacgcttacctgactctgaccagtcgaatgactggagaa
gatggaaaagaagtcattatggaaattgagaaaaaacttcctcagctattcagactttta
aaaattcacatttccagtcagaattcagacctcagtagtgctgctctacaggccttgggg
ttttgcttatataatcccaaaattacctcaggattatcagagacagatattcaagaactg
cttttaaaattgaatgatagtgttaaaagcccagacaaaaatgtacgtactagggcactt
tgggtgatatccaagcagacgtttcctgctgaagtcattggcagcgtagtatccagtgta
attgactcattagaaatagtgtttaatagaggagaggtgcattctgctgttgttgattat
gaagcattaaatgtcatcataaggctaattgaacaagccccagttcaaatgggagaagag
tcagttaggtgggcaaaactggtcatacctttagtggttcattcagctcaaaaggtacat
ttgcggggagcaactgctctagagatgggaatgccattgttgcttcagaaacaacaagaa
atagcatctatcacagagcagcttatgactactaaattactttcagaactccaaaagcta
tttatgagtaagaatgagacttatgtgttaaaattgtggcctttgtttgtcaaacttctt
gggaagaccttgcatcgaagtgggagtttcattaattctctgttacagctggaagaacta
ggatttcgcagtggggcacccatgattaaaaaaatagcttttattgcttggaagagttta
atagataattttgctttgaatccagaaatactatgcagtgcaaaaaggctgaagttgtta
atgcagcctttgagttccatccatgtgagaacagaaactttagcactaacaaagttagaa
gtctggtggtatctgctgctgagacttggacctcatcttcctgctaactttgaacaggtg
tgtgtgcctctgattcaaagtacaataagcatcgattctaatgcttcatctcaaggcagt
tcgtctcgcgtaactgcttctccaggtttaagtcctatgactcctatacacaaaggtcct
tccccatatggaactcctgtaactccccggatgaatttaagttcaaattttggtggaatg
gccacaatcccctctattcaacttttgggacttgaaatgctgcttcattttttgttgggt
ccggaagtcttgagttttgctaagcaaaacaaacttgtactgagcttagagccactcgaa
tatgcgttaatcagcagctcttcttttttttccaaacatgcaaatacacttatcactgct
gttcatgatagctttgttgcggttggaaaagatgcttctgatgcagttgtcaatgctatt
tggaaggagctaattagcttgatgaagtcagttattgaatcaggtaacagaaaagagaga
ccaggttctgaagttttgaccctgttactaaaatctttagaaagcatagtgaagtcagaa
gtatttcctgtgtcaaaaacactggtcctcatggaagttacaattaaaggactgccccag
aaagtattaggttcaccagcatatcaggttgctaatatggatattcttaatggaactcct
gctttgttcttaattcagttaattttcaacaataatctcttggaatatggtgtagatgat
gagaggttttttctcaatctggaaacacttgttggctgtgtcctttctggtccaacttca
ccactagctttcagtgattctgttttaaatgttattaaccaaaacgcaaagctgttggaa
aacaaggagcatctctggagaatgtggggtattatagtcaccccattaacggaattgatc
aatcagaccaatgaagtgaatcaaggtgatgccttagaacataattttagtgccatatat
ggtgcattgactttaccaataaaccatattttttcagtacagaaatttccagtggccacc
atgaagaccttacttagaacttggtcagaattatatagagcatttgcccgctgtgctgct
ttggtggcaactgcagaagagaatttgtgctgtgaggaacttgcttccaagataatgtcc
agtttagaagattcaggcttttcaaatttgttgttcttggataggatcattcatataatt
actgtaatggtggattgcattgacttctcaccatataatattaagtatcagcccaaagtt
aaatcaccacagagaccttcagattggtccaaaaagaagaaagaacctctagggaaattg
gcttctttatttaaacttactgtgagagtgatctattctttccacactctgagcttcaag
gaagtacattctgatactctcctcactgttggcaactcaatcaccagtattctttctaat
gtacttggacgtatttctttgccttctatgatccgaaaaatatttgcaactttaacaaga
cctctggcattattttatgaaaacttaaagcttgatgaagttcctaaagtgtatagttgt
atgagcaacaagttagaaaagctactgggagagataattacttgtctacacttcagctac
actggaacttacgacagcgaacttcttgaatacatctctccattattatgcataatattt
ttgcacaggaataaacagattagaaaacaaagtgctcagttctggaacgccacatttgct
aaagtgtcgacgttgacttatcctgaagagttaaaaccagtactaagacaagccaaacag
aaatttctgttgcttttacctggtttggaaaatgttgaaattatggaggaatccagtgga
ccatattcaaatgcaacagaaaattcacagttaaatatgaagataagtggcatggaaaga
aaatcaagtggaaaaagagattcttttttggcacaaacaaaggatgcaaaagaaaataag
aaaccaccagtcaaattgaaattagaatcgtcttctacaaaaacaaagagtgaaatgcct
ttggaagaggaaaagtctgttgactttgtgtttatacctccagaaggaaaagaaacaaag
gaaagaatactaactgaacatcagaaagaagtattcaaaacaaagagatacgatattcct
gtcatgtataataatctggatgtttcacaagacactttgttttctcagtatacccaggaa
gagtccatggaaattcctgctgtaactgaaaaatcaaaggaagattccaaggaggaacaa
atggaaagtgacattgttatttctcaagatgtcacgggaaactgtggtatggatgagcat
cttgaaaaggcttctctttcaaataatgactgtggttctaatggggaaacgagtccagaa
gtaccgagtagtaataatgatgccagaaagaaacctttaatttcatcaaagaaaacaacc
gaatgtgcatctaatgcagaaaatacttctggtctcaacagtagctcagtttctaatacc
attatttctggaactcccccacagcctacaagtcggaggcaaacgtttattactttggag
aagtttgatggttctgaaaatagaccttttagtccatcccccttaaataatatgtcatca
actgtaacagtgaaaaataaccaggaagtcatgggtaaaacagatactccaccaaaagca
aagaaaagagaaatggtttttgcaaaatgtgattctgaaaaaatagcacatggaattaag
agatcaagccgaaggtcaagtaaagctgaacaaatagggaacaaaaggtctaagctctta
atgagatccgatcaagagaaaaatactcaggaatctattgatggcacagtagttttagaa
aataacccacctggtttgcttaatcaaacggaatgtgtgttagataatcaggttcatctc
tctgaatctatgatggaatatgaggatacaatgcttaaaccaacaatagaaaatgtagta
gtagtagaaaacaatactgtagaagagaaaacattaggaatcaatttggaatccaaagaa
aatacaccccctgctacaataccagcagatcaaatgatagatgaggatagtcctgttcag
ataactccaaatcagaaaacgcttagacgatcctcaaggcgacgttcagaagtagcagag
cccaccactgacagccaagagaaagaaaataatcaaaaaaaagaaagacgtaaggaagaa
gaaaagacccttcagaaaagtttgttgcatgtaaaagatgatgtgttacctaagcaaaaa
gtgatttctgaacaaactgtacaggaacatttaattgagaaaggaaataatgtacacgag
aagacttttggggaaaccagcactactgctgaaattgatgaaagtaaaagaaagctagac
cttgagaatattaaatctgagggagatggtgcccaggactttgcagataagtcctctgaa
aaaccagtaagtggtcgaacacggtatcaaacaagaagagcatcccaaggtttactttcc
agcattgaaaactcagaatctgatagttctgaggcaaaagaagaaggttctaaaaagaag
agatctggaaaatggaaaaacaaaagcagtgatagtgttgacattgaagatcaggaggag
aaagtgataaaacaggaatgtgtaaatgttgaaaaccagacacttgattgcaaagcaaat
tctgaagtagagagagacctaaaatctcagatttgtgaacaaaaagatgagattaataat
gtaactcttgaagattctacagtatcttcagatttattgcaggtttctgatgacatgtca
actacttacgagggaaaaagtaaaaccagcaaatgtacagaatactccttttcaaaccct
tctgtgccagaatcaaatctaaggactagaaatgccagcaagagattacaaaaacgagat
tctatagaaaataacaccgtgggagaatcctcaaaaatagggacatcagacattttgctt
tctgaaaaaacttttcaaacacttgaatgccagcataagagaagtaggagggtaaggaga
tctaaaggttgtgattgctgtggagaaaaatcacagcctcaggaaaagtcattcattggg
ttaaagaatacagaaaactatgatgtaaaagtcaatgaaacaaaaaagacagatacgcaa
acacctgtaaatgtatcagagacttctaaagctaatctgtgctctgagttaaaactttca
gatgaacataatggtgtgaattttcatttgggactcaaggaggagagtgctgctgttaat
gattcattaattgtatctgaaagtgagttgaaagaaattactattcaaaaccctcttcct
tctgaagtagtaaattttgaagaagaaacttgtgatatggattctgaagaagcaacacct
cttgaaagccaggagccatccaataaaaaatgtaaaactgttagcccatgtttaggtgat
tccaaagataattcactggaatattctactttggagaccaaagaagaaaagtcagaggct
gttttggaaaaggaattaagtatagagaatattgtcagtgttgaaacagttggatgtaaa
gctaaagcaaaattcaatccagaagtagaagctgttgaattggatgtagaaagtgataaa
tctgaagctagcttttctgaacaaaagagtactgaaactggtgttagtgaagaagaggta
atggagattaatagtgaaagaagtgatgaatctgaagcagaggcagctgaaaaactgaag
gctgaagaagcagtaactgaagaatttaattctggtcttggtcattctgataataccaca
gaaatgagtgctcaggtagagatacctgaacaaacagcagttggggagttagatgaaaga
agtgacaaatctaatccaggctcatctgaagaaatgaatgctgaaatggaaaattgtgaa
gagacagtgatgggtgaagtgagtgctgaagctgaccaagtcagtgaaacagaggacagg
gactcaactaccaaaatctctactcagccagtacaagccgatacaaagacttcaactatg
gaaatcggcggtttcgttctcagtagacttgggatgagcactgaagaaggaaaagttgac
tctaatgaaactgaagcaaatactgaacttaataagtctgaagaaacaacatcagatgac
aatcaaatggtggggggaaatgatgagattttacaggaagttcaccatacttcagagaaa
gtggaggaaacaccagagtctctgacatctgaaacagccatctctgaactaataacagaa
gacaataatgcatctcctcaaaaattaagggaacttgatcctttacttgtatcagcaaat
ggcagtcctagtggcatgcagacacgctgtgtatggtctcctttggcttctccatcgacc
agcattttaaagagaggactaaaaaggcctcaggaagatgagatatcatcacctgttcac
aaggttcgccgtgtctcctttgcagatccaatataccaagcaggattggcagatgacatt
gataggcgatgctctattgttaggtcccattcttcaaataattctcccatagtaaaaagt
gttaaaacttcacctactgcacaatctaagcataatgccacttcaatcaaaggatttctg
tccccaggatcacgtagccctaaatttaagagctcaaagaagtgtttaattacagaaatg
gctaaagaatctatgccatgtccaacagaaagtgtttacccagctttggtgaactgtgtg
gctccagttgatatcattttacctcagattacatcaaacatgtgggcaagaggactggga
cagctcattagagctaagaatataaaaacgattggtgatttgagtactcttacagcatct
gaaataaaaactcttcctatccgttctccaaaagtgtccaatgtaaaaaaggctcttaga
gtctatcatgagcagcaggtaaagtctcgtggactagaggagattccagtttttgatatt
tctgaaaaaacagtaaatggaatacaaactaaatctctcccttctgatgaagaaagactt
gcctcagatttaattgatcctgttgctttggaaactccattacctaaaaatcttgtggca
cagattagtgcacttgcccttcaactagattctgaagatctccataattattcaggaagc
cagctgtttgaaatgcatgagaaacttggtagcatggcgaactctataataaaaaatttg
cagtcacgttggaggtcaccaacccatgaaaattctgtttag
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integrated database retrieval system
