Zalophus californianus (California sea lion): 113919665
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Entry
113919665 CDS
T07874
Symbol
SNED1
Name
(RefSeq) LOW QUALITY PROTEIN: sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zca04990
]
113919665 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
zca04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
113919665 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
cEGF
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
NDNF
Motif
Other DBs
NCBI-GeneID:
113919665
NCBI-ProteinID:
XP_035582538
UniProt:
A0A6P9FIW8
LinkDB
All DBs
Position
3:194478462..194562221
Genome browser
AA seq
1380 aa
AA seq
DB search
MQLAAAWALLLAAALGLGVRGVRGAVALADFYPFGAERGDAVTPKQDDGGSGLRPLSVPF
PFFGAEHSGLYVNNNGIISFLKEVSQFTPVAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
ATDPATLRRATEDVRRYFPELPDFSATWVFIATWYRVTFFGGSSSSPVNTFQIVLITDGK
FSFTIFNYESITWTTGTHASSGGDTTGLGGIAAQAGFNAGDGRRYFSIPGSRTADMAEVE
TTTNVGVPGRWAFRIDDAQVRVGGCSHTTSVCLALRPCLNGGKCIDDCVTGNPSYTCSCL
SGFTGRRCHLDVNECASHPCQNGGTCTHDVNSFSCRCPAGFRGPTCETALSPCDTRECQN
GGQCRAERGSAVCLCLAGYTGAACETDVDECASSPCLNGGSCVDLVGNFTCLCAEPFEGP
RCETGSQPVPDACLSAPCQNGGTCVDADEGYVCECPQGFTGPDCRERNPDHCECRNGGRC
LGANTTLCQCPPGFFGLLCEFEVTATPCNMNTQCPDGGYCMEYGGSYLCVCHTDHNVSHS
LPSPCDSDPCFNGGSCDVHEDSYTCECPRGFHGRHCEKARPRLCSSGPCRNGGTCREAGS
EYHCSCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSP
CFRSPCMNGGTCEDLGPDFSCRCRAGYMGRRCQAEVDCGPPAEVRHATLRFNGTRLGSMA
LYKCDQGYSLSSPSHIRVCQPQGVWSEPPQCHETDECQAQPCRNGGSCRDLPGAFVCQCP
AGFTGVHCETEVDGCHSSPCQHGGRCENDGGAYLCVCPEGFFGYHCETAYPCFSSPCGGH
GYCLAGNGSPQLHCKVGYYGRDCAKELFPPTALKVERVEESGVSISWRPPEGQAARQMLD
GYAVTYTSSDGAYRRTDFVDRSRSSHQLRALAAGRAYNISVFSVKRNANNKNDICRPVLL
LARTRPRPVEGLEVTNVTASTISVRWALHRIRHATVSSVRVSIRRPEAQEDQSTDMDKGV
DRFTFGALLPGRSYTIQVTALSGRGGQEPPTESLASAPLHVWTREALPPANLTAARVTAT
SAHVVWDTPTPSTLLEAYVINVTTSQSTKSRYVPNGRLTSYTVRDLLPGRRYQLSVTAVQ
STEGDQLHSEPAHLYIITSSRDGADRRWHREGLHPRVLRNRPPPARLPELRLLSDRDAPE
TQTPGPRFSELVDGRGRVSAKFGGLPGKSATMRSQPTAPVQLENTEETPKQVPEQVSLAL
QLPEHGSDKDMENTPGNCSENPCQNGGTCVPGVDTHSCDCNPGFKGRRCELACKKVPQPC
TRLFSETKAVPVWEGGACHHMYKRVYKVHQDICFKESCESTSIKKTPNRKHSNSPTLKKS
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgccgccgcctgggcgctgctcttggccgcggccctggggctcggggtgcgc
ggggtgcgcggcgcggtggccctcgccgacttctacccgttcggcgcggagcgcggcgac
gcggtcacccccaagcaggacgacggcggctcggggctgcggccgctctccgtgcccttc
ccgttcttcggcgccgagcactccggactctacgtgaacaataatgggatcatctccttc
ctgaaagaagtctctcagttcaccccagtggccttccccatcgccaaggaccgctgcgta
gtggcagccttctgggcagatgtggacaatcggcgtgcaggtgatgtgtactaccgggag
gccactgacccagcaacgctgcgcagagccacagaggatgtcaggcgctacttccccgag
ctcccggacttctctgccacctgggttttcatagctacctggtaccgcgtgaccttcttt
ggaggcagctcctcttcccctgtcaacacgttccagatcgtgcttatcactgacggcaag
ttctccttcaccatcttcaactatgagtccatcacgtggacgacgggcacacacgccagc
agtgggggcgacaccacgggcctggggggcatcgcagcccaggccggcttcaatgcgggt
gatgggcggcgctacttcagcatcccaggctcccgcacggcggacatggcggaggtggag
accaccaccaacgtgggtgtgcccgggcgctgggcgttcagaatcgatgatgcccaggtg
cgcgtggggggctgcagccatacaacctccgtgtgcctggccctgcgcccgtgcctcaac
ggcggcaagtgcattgatgactgtgtcacgggcaacccctcctacacctgctcctgcctc
tcaggctttacagggaggaggtgtcacctggatgtgaacgaatgtgcttcccatccgtgt
cagaatggcgggacctgcacacatgacgtcaacagcttcagctgcaggtgcccggccggc
ttcagggggcccacctgtgagacagcactgtctccatgtgacaccagagagtgccagaac
ggcggccagtgccgggcagagcggggctcggcggtgtgcctgtgcctggccggctacaca
ggcgcagcctgcgagacggatgtggacgaatgtgcctccagcccgtgcctcaatgggggc
tcgtgtgtcgaccttgtggggaacttcacctgcctgtgcgcagagcccttcgagggacct
cgctgtgagacgggaagccaaccagtgccggatgcctgcctctcagccccttgccagaat
gggggcacctgtgtggatgcagatgagggctacgtgtgcgaatgcccccagggcttcact
gggcccgactgcagggagagaaaccctgaccactgtgagtgccgtaatggtggcagatgc
ctgggggccaacaccaccctctgccagtgccccccaggcttctttgggctcctctgtgaa
tttgaagtcacagccactccctgcaacatgaacacacagtgtcctgacgggggctactgc
atggagtacggtgggagctacctctgcgtctgccacacggaccacaacgtcagccactca
ctgccatcaccctgcgactcagacccctgcttcaatggaggctcctgtgacgtccacgag
gactcctacacttgcgagtgcccccgagggttccacggcaggcactgcgagaaagcccgg
ccacgcctgtgcagctcggggccctgccggaacgggggcacgtgcagggaggcgggcagc
gagtaccactgcagctgcccctaccgcttcaccgggaggcactgcgagatcgggaagccg
gactcctgtgcctcgggcccctgccacaacggcggcacctgcttccactacattggcaaa
tacaagtgtgactgtcccccaggcttctctgggcggcactgcgagatagccccctccccc
tgcttccggagcccctgcatgaatgggggtacctgtgaggacctgggcccggatttctcc
tgccgctgccgagcagggtacatgggacgccggtgccaggcggaggtggactgtggcccc
ccagcggaggtgagacatgccacgctgcgcttcaacggcactcggctgggctccatggcc
ctgtacaagtgtgaccaaggctacagcctgagctcccccagccacatccgcgtctgccag
ccgcagggtgtctggagcgaacctccacagtgccacgagacagacgagtgccaagcgcag
ccctgccgtaatggaggctcctgcagggacctcccaggggcctttgtctgccagtgccct
gcaggcttcactggagtccactgcgagacagaggtggatggctgccactccagcccctgc
cagcacggaggccgatgtgagaacgatggcggggcctacctgtgcgtctgcccagagggc
ttcttcggctaccactgtgagacagcgtacccctgcttctccagcccctgtgggggccac
ggctactgcttggccggcaatgggtccccacagctgcactgcaaagtgggctactacggg
agggactgtgccaaagagctcttcccaccaacggccctcaaggtggagcgagtggaagag
agtggggtctccatctcctggcgtccacctgagggccaggccgccaggcagatgctcgac
ggctatgcggtcacctacacctcctcggacggtgcctaccgccgcacagactttgtggac
cggagccgctcctcgcaccagctgcgggccctcgcagccggcagagcctacaacatctcc
gtgttctcggtcaagcgcaacgccaacaacaagaacgacatctgcaggccggtgctgctg
ctcgcccgcacacgaccccgcccggttgagggccttgaggtcaccaacgtgacagccagc
accatctcagtgcggtgggctctgcacaggatccgtcacgccaccgtcagcagtgtccgc
gtgtccatccggcgtcctgaggcccaggaggaccagtccaccgatatggacaagggtgtg
gacaggttcacgttcggggccctgttgccaggaaggagttacaccatccaggtgactgcc
ctcagcgggcgtgggggacaggagcctcccaccgagagcctggcctcggccccactgcac
gtgtggactcgtgaggccctgccgccagcaaacctgacagccgccagagtcacggccacc
tctgcccatgtggtctgggacacccccactccaagtaccttgctggaggcgtacgtcatc
aacgtgaccaccagccagagcaccaagagccgctacgtccctaacgggaggctgacgtcc
tacacggtgcgggacctgctgccaggacggcgctaccagctgtcggtgaccgccgtgcag
agcactgagggcgaccaactgcacagcgagcctgctcacctctacatcatcacctcctcg
agggacggcgctgacagacgctggcacagggagggactgcatccccgggtgctcagaaac
agacccccgcccgcacgcctgccagagctgcgcctgctcagtgaccgcgacgcgcctgaa
acccagaccccgggccccaggttctcagagctggtggacggcagagggcgagtgagtgcc
aagtttgggggcttgcctggcaaatcggccaccatgagatcgcaacccacagctccagtg
cagcttgagaacacggaggagacccccaagcaggtgcctgagcaggtcagcctggccctc
cagcttcctgaacatggcagtgacaaggacatggaaaacacccctgggaactgttcagaa
aacccctgtcagaacggaggcacctgcgtgccaggtgtggatacccacagctgtgactgc
aacccgggattcaaaggcagacgctgtgagctcgcctgtaaaaaggtgccccagccctgc
actcggctcttctcagagacaaaggccgtgccggtctgggaaggaggtgcctgtcaccac
atgtacaagagagtctacaaagtgcaccaggacatctgcttcaaagagagctgtgaaagc
acaagcatcaagaaaaccccaaacaggaaacacagtaacagtccaacactgaagaaatct
tag
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