Zalophus californianus (California sea lion): 113919676
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Entry
113919676 CDS
T07874
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113919676 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113919676 (WDR33)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113919676 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Collagen
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
113919676
NCBI-ProteinID:
XP_027444995
UniProt:
A0A6J2CKZ1
LinkDB
All DBs
Position
3:85657633..85769979
Genome browser
AA seq
1336 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGNSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQGPP
AQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI
PFQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGPMSERRHEQSSGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGR
RPGDERFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDSFPGPEDFGPEENFDPSD
EAARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPR
PDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGK
GRGGPGPSQRVPKSGRSSSLDGDHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMN
SGPPRRGASRGGGRGR
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccaacaccaa
gcacctcgacaactattttataagcgacctgattttgcacagcagcaagcaatgcagcag
cttacctttgatggaaaacggatgagaaaagcagtaaaccgaaaaaccatagactataat
ccgtctgtaattaagtatttggagaatagaatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggttattataatgatttggtcccacctatagggatgttgaat
aatcctatgaatgcagtaacaacaaaatttgttcgaacatcaacaaataaagtaaagtgt
ccagtatttgttgttaggtggactccagaaggaagacggttggtcaccggagcttctagt
ggagagtttaccttgtggaatggactcaccttcaattttgaaacaatattacaggctcat
gatagcccagtgagggccatgacttggtcacataatgacatgtggatgttgacagcagac
catggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgcagatgtgaaatgtgtagactggcatccaacaaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaagtgaaattaaatctcaacggc
aattggctactcactgcatcacgtgatcacctctgtaaacttttcgatatccgaaacctg
aaagaagagcttcaagtcttccgaggtcataagaaagaagccacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggagggtccgatggctctttgttattctggcat
gttggggtagaaaaggaagtgggtgggatggagatggcccatgaaggaatgatctggagt
ctggcttggcatcctcttggacatattctctgctcaggttcaaatgaccatactagcaaa
ttctggacccgaaaccgaccaggtgataaaatgcgagataggtataatctcaacctgttg
cctggaatgtctgaagatggagtagaatatgatgaccttgaacctaacagcctggcagta
attccaggaatgggaataccagaacaactaaaattagctatggaacaagagcagatgggg
aaagatgaatcaaatgaaattgaaatgacaattccaggtttggactggggaatggaggag
gtgatgcaaaaggatcagaaaaaagttcctcagaagaaagttccttatgcaaaacctatt
cctgctcagttccagcaggcttggatgcaaaataaagttccaattcctgccccaaatgag
gtactgaatgacagaaaagaggacattaaattggaagagaagaagaaaacacaagcagaa
attgaacaagaaatggccacattacagtatactaacccacagcttctggagcaacttaaa
attgaaaggcttgcacagaaacaggctgagcaaattcagcctcctccttcatctggcacc
cctctccttggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcagcagccccatccatctcagcagatgccaatgaacatggctcaaatggggcctccg
ggtccacagggacagtttagaccccctggaccccagggacaaatgggaccacaaggtcct
ccactgcatcagggaggtggggggccacaaggattcatgggaccacaagggccccagggc
ccgccccaggggttgccgaggcctcaggacatgcatgggccccaaggaatgcagaggcat
cctggacctcatggccctttgggacctcaaggaccacctggaccacagggtaattctggt
cctcaaggtcatatgggtcctcagggtccacctggcccacaaggtcacataggccctcaa
ggcccacctggtccccagggtcacttgggccctcaggggcctcctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaaggacctcctcatcctcatgggatacaaggt
gggccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggtcctccaggcccccgagaaaatcagggtcctgctccccaaggg
atgatgatgggccatccgcctcaagagatgagaggacctcaccctccaagtggactgctg
ggacatggccctcaggagatgcgaggccctcaggagatgcgaggcatgcaggggcctcca
gcccaagggtccatgctgggccccccccaggaattgcgagggcctccaggctcacaaggt
cagcaggggccgccccagggctctttggggccgccaccccagggtggcatgcaagggccc
cctggacctcagggacagcagaacccggcaagagggccacatccatctcaagggccaata
ccattccagcagcagaaaacagctctgctaggtgatgggccccgggcccccttcaatcag
gaaggacagaacgcaggccccccacccctgataccaggcctagggcagcagggagcacaa
ggtcgcatcccccctcttaaccctggacaaggacctggccctaacaaaggtgactcacgc
ggccctcccaaccatcacatgggccccatgtcagagaggcggcatgagcagagcagcggc
cctgagcacgggcccgagagggggcctttccggggcggccaggactgcaggggtccccct
gataggcgtggccctcaccccgacttccctgacgacttcagcagaccagatgacttccac
ccggacaagcgctttggccaccgattacgtgaatttgaggggcgaggaggacctttacca
caagaagagaagtggaggcgtgggggccccgggcctccgtttccacctgatcacagggaa
ttcagcgagggggatggccggggcgcagcccggggccctccaggggcttgggaaggccgc
agacctggagatgaacgattcccccgggatcctgaggacccacgttttcgagggcgcaga
gaagaaagctttagaagaggagcacccccaagacatgagggccgtgccccgcccagagga
agggacagttttcctggtcctgaagactttggtccagaggagaattttgatccttctgat
gaagcagcccgaggaagagatctcagaggtcgaggtcggggtactccacgaggaggaagg
aagggtttactccccactcctgatgaattccctcgctttgaaggaggacggaaaccagac
tcctgggatggaaatagagagccagggccaggtcatgaacatttccgtgatgctcctcgc
cctgatcatccccctcatgatggtcattccccagctagcagagaacgttcctcttctctc
cagggcatggacatggcatccctgccaccccgaaagcgtccctggcatgatgggccaggg
acctcggagcacagagaaatggaagccccagggggtccttctgaggatcgaggaggcaaa
ggccgagggggcccaggaccttcccagagagtgccaaaatccgggcgctccagctccttg
gatggagatcaccatgacggctaccacagagatgaaccttttggaggccctccaggcagc
ggtactccttccagagggggccggagtggcagtaactgggggagagggagtaacatgaac
tctggcccgccaaggcgaggagcttcaaggggtggtggaaggggtcggtag
DBGET
integrated database retrieval system
