Zalophus californianus (California sea lion): 113920510
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Entry
113920510 CDS
T07874
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04151
PI3K-Akt signaling pathway
zca04382
Cornified envelope formation
zca04510
Focal adhesion
zca04512
ECM-receptor interaction
zca04518
Integrin signaling
zca04820
Cytoskeleton in muscle cells
zca04926
Relaxin signaling pathway
zca04933
AGE-RAGE signaling pathway in diabetic complications
zca04974
Protein digestion and absorption
zca05146
Amoebiasis
zca05165
Human papillomavirus infection
zca05200
Pathways in cancer
zca05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
113920510 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113920510 (COL4A2)
04518 Integrin signaling
113920510 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113920510 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113920510 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
113920510 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
113920510 (COL4A2)
09158 Development and regeneration
04382 Cornified envelope formation
113920510 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
113920510 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
113920510 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
113920510 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
113920510 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
113920510 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zca04147
]
113920510 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
zca00536
]
113920510 (COL4A2)
Exosome [BR:
zca04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113920510 (COL4A2)
Glycosaminoglycan binding proteins [BR:
zca00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113920510 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113920510
NCBI-ProteinID:
XP_035582689
UniProt:
A0A6P9F9G1
LinkDB
All DBs
Position
3:complement(2681243..2849527)
Genome browser
AA seq
1762 aa
AA seq
DB search
MVMITLRTVVHSKLVFWIPKKESFPASGPFYVFSNELGLELESPEGHGEGPHRKGREGLE
RTAKSQGREGLPRGLERIWGVCGGPLPIKGKTGKADFRKRRDFLLFTCWPGQPGPVGPQG
YTGPPGLQGFPGLQGRKGDKGERGSPGTIGPKGDVGARGVSGFPGADGIPGHPGQGGPRG
PPGYDGCNGTRGDVGRQGPVGPDGFLGPPGPQGPKGEKGEPYALSSVDRDRYRGEPGDPG
LVGFQGPPGRPGPIGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKGEKGDMGLPGP
NGIPSDTHHAIIGPMKEMFHPDQYKGEKGSDGEPGVKGISLKGEEGVMGFLGPRGAAGFD
GEKGSPGQKGSGGLDGYQGPDGPPGPKGEAGDRGRPGAPAYFPYPSLTKGARGDPGFPGT
HGEPGSRGEPGDPGPPGLPGTSVRDEDGKRGLPGEMGPKGFIGDPGIPALYPGPPGTDGR
PGLPGPPGPAGPPGPDGFLFGLKGTEGKVGYPGPSGFPGVRGQKGWKGDTGDCKCAESDQ
FIAGLPGLPGPKGFPGISGEPGKKGSQGDPGQHGIPGFPGFKGSPGNVGPPGPKGVKGDS
RAVTTKGERGQPGVPGVPGLKGDDGVPGRDGLDGFPGLPGAPGDGIKGPPGDSGYPGVPG
TKGVPGERGSPGLGLPGPKGERGFPGDAGLPGPPGFPGPPGPPGTPGQIDCDTGVKRPIG
GDGQEAVQPDCVGGPKGSPGLPGPPGLTGAKGLQGIPGLSGADGAPGLKGLPGDPGREGF
PGPPGFVGPRGSKGAAGLPGADGPSGPTGLPGPIGPPGDRGLPGEVLGAQPGPRGDAGLP
GQPGLKGPPGERGPPGFRGSQGMPGMPGLKGQPGFLGPSGQPGLPGPSGQHGFPGAPGRE
GPLGLPGAPGHGGLPGDRGDPGHTGVPGPVGMKGLFGDRGDPGLLGERGPPGSPGFKGMS
GMPGIPGQKGGRGSPGMDGFQGMVGLKGRPGFPGNKGEAGFFGVPGLKGLAGEPGVKGSR
GDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGVPGMPGIPGLSGVPGLPGRPG
HIKGVKGDIGVPGVPGSPGFPGVPGPPGIIGFPGFTGSRGDKGAPGRAGLYGEVGPTGDF
GDIGDTIDLPGSPGLKGERGVTGAPGLKGFFGERGTVGEVGFPGITGVPGVQGPPGPKGQ
TGFPGLTGLQGPQGEPGRVGLPGDKGDHGWPGIPGSPGFPGIRGISGLHGLPGTKGFPGS
PGADIHGDPGFPGPTGDRGDPGEPNIRPGPFGAPGQKGERGDPGERGPVGSPGLQGFPGI
TPPSNVSGLPGDKGAPGIFGLEGYRGPPGPPGPAALPGSKGDVGNPGAPGNPGTKGWGGE
PGAQGRPGVLGLPGQKGPRGEPGFMGNTGATGSVGDRGPKGPKGGRGLPGVPGSVGSPGI
AGIPQKITIQPGPAGPQGRRGPPGAQGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAIPG
FRGDQGPTGQQGPVGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQTAQEPQCPVGMSK
LWSGYSLLYLEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYFASRNDKSYWLSTT
APLPMMPVAEDDIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTA
AGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTAIPEQTFQGAPSA
DTLKAGLVRTHISRCQVCMKNL
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgattaccctaagaacagtggttcattctaaattggttttttggatcccgaaa
aaggagtccttcccagcttctgggccgttttacgtattttcgaatgagctgggacttgag
ctggaatccccagagggtcatggagaagggccgcatcggaagggccgggaaggcctggaa
cgcactgccaaaagccaaggaagggaggggctgcccaggggactggagaggatatggggt
gtctgcgggggcccgctgcccataaaaggcaagacaggaaaagcagacttcagaaagaga
agggatttcctactattcacatgttggccgggccagcccgggccagtgggcccccagggg
tacaccgggcccccaggcctgcaggggttcccaggactacagggccgcaaaggtgacaag
ggcgagcggggctctcccgggaccatcggaccgaaaggagacgtgggagcgagaggtgtt
tctggattccctggcgccgacggaattcccggacaccccgggcaaggtgggcccagagga
ccgcccggttatgacggctgcaacggaaccagaggagacgtaggccggcagggacccgtt
ggccccgacgggttcctcggccctcccgggccccaaggacccaaaggagagaaaggcgag
ccgtatgcgctatccagtgtggaccgcgacagatacaggggtgaacccggagatcctggc
ttggttggtttccagggcccccccggccgtcctgggcctataggacagatgggtccggtt
ggagctccgggaagaccaggcccgcctggaccccctggaccaaaagggcagccaggcaac
agaggacttggcttttatggagaaaagggtgaaaagggcgacatgggcctgccaggaccc
aatgggattccctcagacacccaccatgccatcatcggacccatgaaggaaatgttccac
ccagatcaatataagggtgaaaaggggagtgatggggagccgggagtaaaaggcatatcc
ttgaagggagaagaaggagtcatgggttttctgggcccacggggtgctgctggcttcgat
ggtgaaaaaggttctccgggacaaaaggggagcggaggactggatggttatcaaggcccc
gacgggcccccaggacccaagggagaagcgggtgaccgcggccgcccaggtgcacctgct
tacttcccttacccctccctaactaaaggtgccagaggtgacccaggattcccagggacc
catggggagcccggaagccgaggtgaaccaggagacccgggcccacccggcctccccggc
acgtctgtcagagatgaagatgggaagagaggtttaccgggtgaaatgggccctaaaggc
ttcataggagacccaggcatccctgcactgtaccccggcccaccgggcactgatggaagg
ccaggactcccaggacccccagggcctgccggaccaccgggaccagacggtttccttttc
ggccttaaaggaacagaagggaaggtgggctaccctgggccttctggcttccctggggtt
cgcggacagaaaggatggaaaggtgacactggggactgtaagtgcgcagagagtgatcag
ttcatcgcagggctcccggggctgccaggccccaagggctttcccggcatcagtggagag
ccagggaagaaagggagccaaggagaccccggccagcacggcatccctgggtttcccggg
ttcaagggctcccctggcaacgttggacctcccgggcccaaaggggtgaagggggattcc
agagcggtcaccaccaaaggtgagaggggacagccaggtgtcccgggtgtgccggggctg
aaaggtgacgacggtgtccctggccgcgacgggctggatggattcccaggcctcccgggc
gctccgggtgatggcatcaaaggccccccaggggactcaggttacccgggagtacctggc
actaagggcgttccaggagaaaggggctccccgggactgggcctgcccggccccaaaggc
gagcgtggattccccggagatgccggattacctggaccaccaggctttcccggtcccccc
ggccccccaggcactcccggacaaatagactgtgacacaggtgtgaaaaggcccatcgga
ggtgacggacaggaggccgtgcagccagattgtgtcggagggcccaagggatcgccaggc
ctgccgggacccccaggcctcacaggtgccaagggcctccaagggataccaggactctcg
ggagctgacggagcaccagggctcaagggtctccccggagacccaggtcgtgaaggattc
ccaggacccccagggttcgtggggccccgaggatccaaaggtgcagcaggccttcctggt
gcggatggaccctcaggtcccactggtctgccaggccccatcgggccccccggggacagg
ggccttcccggagaagttctgggagcccagcccgggccccggggtgatgctggactgcca
ggacagcccgggctgaaaggccctccgggagagagaggcccacctggattcaggggaagc
cagggcatgccgggaatgccgggcctgaagggccagccgggcttcctaggaccctcgggc
cagccaggcctgcccgggccgtcgggacagcacggcttcccaggagctcccggccgggag
gggcccttggggctgccaggcgcccccggtcacggaggcctgcctggagacagaggggac
ccagggcacaccggcgtccccggccctgtgggcatgaagggtctcttcggcgacagaggt
gatcctggtttgctgggggagagaggccccccgggaagtcctgggtttaaaggaatgagc
ggaatgcctggtatccccgggcagaaaggcgggagaggttcacccgggatggatggcttc
caaggcatggtcggactcaaaggaagacccgggtttccgggaaacaaaggagaggctgga
ttttttggagttccaggactgaagggtctggctggggagccgggtgtgaaaggcagccgc
ggggaccccgggcccccaggaccacctcccatcatcctgccaggaatgaaagacatcaaa
ggagagaaaggagatgaagggcctatggggttgaaagggtacctgggcctaaaaggtgtt
cccggaatgccagggatccccgggctgtcgggagtccccgggttgccggggaggccgggc
cacatcaaaggagtcaaaggagacatcggcgttcccggcgtgcctggttcaccaggattc
cccggcgtgcctggcccccccggaatcatagggtttcccgggttcacaggaagtaggggc
gacaagggagctccgggcagagcaggcctgtacggcgaggttggccccacaggtgacttc
ggtgacattggagacactatagatctgccgggaagcccaggcctgaagggggagcggggc
gtcactggggcaccaggtctaaagggattctttggggaaagaggaacggtgggcgaagtc
ggcttccccgggataacaggcgtgccaggcgtccagggcccccccggacccaaagggcaa
acaggcttcccaggactgacagggctgcagggaccgcagggagagccagggcgagtggga
ttgcccggtgacaaaggagaccacggctggccggggattccaggctcgccaggttttccc
ggcatccgaggcatcagcggactgcacggcctgccaggcaccaaaggctttccaggatcc
ccaggtgcagacatccacggagaccccggtttccccggtcctactggggaccggggtgac
ccaggagagcccaacatccgccccggtcctttcggagccccaggacagaaaggggagcga
ggagatccaggggaacgaggcccagtcgggagcccaggacttcagggcttcccaggcatc
acccccccttccaacgtgtctggcttacctggtgacaaaggggcgccgggcatatttggc
ctggaaggttatcgagggccccccgggccgcctgggcctgccgctcttcctggaagcaaa
ggagatgtggggaacccaggagctccaggaaaccccggaaccaaaggatggggcggggag
cccggggcccagggccggcccggcgtgctcggtctcccgggacagaaagggcccagaggg
gagccaggattcatgggaaacacgggagccaccgggagtgtgggcgaccgaggccccaag
ggacccaagggaggccggggactcccaggtgtccctggttctgtgggatcccctgggatc
gcaggaatcccccagaagatcaccatccagccggggccagcgggtccgcagggaaggaga
ggcccccccggggcgcagggagagatggggccccagggccccccaggagagccaggtttc
cgcggggctcccgggaaggcagggccccagggcagaggtggcgtgtctgctattcccgga
ttccgaggagaccaggggcccacgggacagcaggggccggtgggccaggaaggggagccg
ggccgcccggggtcccccggcctgccgggcatgcccggccgcagcgtcagtatcggctac
ttgctggtgaagcacagtcagacggcccaggagccccagtgccccgtgggcatgagcaag
ctctggagcgggtacagtctgctatacttggagggccaggagaaagcccacaaccaggac
ctgggactggcgggctcctgcctggctcggttcagcaccatgcccttcctatactgcaac
cccggggatgtatgctacttcgccagtcggaacgacaagtcctactggttgtccaccact
gccccgctgcccatgatgcccgtggcagaggacgacatcaggccctacatcagtcgctgc
tccgtgtgcgaggccccagctgtcgccatagcggtgcacagccaagatgtctccatcccc
cactgcccagctggatggcggagtctgtggattggatactctttcctcatgcacacagcc
gccggtgacgagggaggcggccagtcgctggtgtcgccgggcagctgcctggaggacttc
cgcgccacgcccttcatcgagtgcaacgggggccgcgggacctgccactactacgccaac
aagtacagcttctggctcaccgccatccccgagcagaccttccagggcgcgccgtctgcc
gacacgctcaaagcggggctcgtgcggacgcacatcagccgctgccaggtgtgcatgaag
aacctgtga
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