Zalophus californianus (California sea lion): 113921358
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Entry
113921358 CDS
T07874
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113921358 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113921358 (EXOSC1)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113921358 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
113921358 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
113921358
NCBI-ProteinID:
XP_027447633
UniProt:
A0A6J2CZT3
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All DBs
Position
15:complement(57241338..57248761)
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AA seq
207 aa
AA seq
DB search
MRSRLRFPPVAVMAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENG
ALPVISVMRETESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDV
RATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPIS
WCEMQCPKTHTKEFRKVARVQPEFLQT
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtcgacttcgtttccctccagtggcagtcatggcgccacccgtgaggtactgc
attccgggcgaacgtctgtgtaacttggaggagggcagcccgggcagcggcacttacacc
cgacatggctacatcttttcgtcgcttgctggctgcctgacgaagagcagcgagaacggc
gcgcttcctgtcatttctgtcatgagagaaacagagtcccaattactaccagatgtgggg
gctattgtaacctgtaaggtctctagcatcaattcgcgctttgccaaagtgcacatcctg
tatgtagggtccacaccacttaagaactcttttcgaggaactatccgcaaggaagatgtc
cgagctactgaaaaagacaaggttgagatttataagagtttccgcccaggtgacattgtc
ttggccaaagtgatctccctgggtgatgcacagtccaactacctcctgaccactgctgag
aatgaacttggggtggtggtggcccacagtgaatcgggtgtccagatggttcccattagc
tggtgtgagatgcagtgccctaagacccacactaaagaattccggaaagtggcccgagta
caacctgaattcttgcagacctaa
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