Zalophus californianus (California sea lion): 113921881
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Entry
113921881 CDS
T07874
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03082
ATP-dependent chromatin remodeling
zca04714
Thermogenesis
zca05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113921881 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
113921881 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
113921881 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zca03021
]
113921881 (SMARCC2)
03036 Chromosome and associated proteins [BR:
zca03036
]
113921881 (SMARCC2)
Transcription machinery [BR:
zca03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113921881 (SMARCC2)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113921881 (SMARCC2)
PBAF complex
113921881 (SMARCC2)
GBAF(ncBAF) complex
113921881 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
113921881
NCBI-ProteinID:
XP_027449086
UniProt:
A0A6J2D082
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All DBs
Position
9:58204968..58225700
Genome browser
AA seq
1244 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPAKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARTEGQATEEKKEPKEPREGVGAAEEETKEKTSEVPKKDEERGKQGDSEKE
SEKSDGDPIVDPDKEKEPKEGQEEVLKDVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPVPPAGTAGPPALHSLAMA
PASVAPAPAGGGAPPGSLGPSEQIGQAGSAAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
PFPNQPTPPAMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFGSLADSISINL
PPPPNLHGHQHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQS
PAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgaggctctggctcggcaagaactacaagaagtatatccaa
gctgaaccacctaccaacaagtccttgtctagcctggttgtacagttgctacagtttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcaccaaactgccgatcaaatgt
ttcttagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaat
gtggaaatgttcatgaccattgagaagtccttggtgcagaataactgcctgtctcgacct
aacatttttctgtgcccagaaattgaacccaaactgctagggaaattaaaggacattatc
aagagacaccaggggacagtcactgaagataagaacaatgcctcccatgttgtgtaccct
gtcccagggaacctggaagaagaggaatgggtacgaccagtcatgaagcgggataagcag
gttcttctgcactggggctactatcctgacagttacgacacgtggatcccagccagtgaa
attgaagcatctgtggaagatgctccaactcctgagaaacctaggaaggttcacgcaaag
tggattctggacacagacactttcaatgaatggatgaacgaggaagactatgaggtaaat
gatgacaaaagccccgtctcccgccgaaagaagatttcagcaaagacgctgacggatgag
gtgaacagcccagattcagatcgacgggacaagaaaggggggaactataagaagaggaag
cgctccccctctccttcaccaaccccggaagccaagaagaaaaacgctaagaaaggtccc
tcgacaccttacaccaagtcgaagcgtggccacagagaggaggagcaagaggacctgaca
aaggacatggatgagccttcaccagtccccaatgtagaggaggtgacgttgcctaaaaca
gtcaacactaagaaggattcagagtccgcgccagtcaaaggaggcaccatgactgacctg
gatgaacaggaagatgaaagcatggagaccacgggcaaggatgaagatgaaaacagtacg
gggaacaagggggagcagacgaagaatccagacctacatgaggacaacgtgactgaacag
acccaccacatcatcattcccagctacgccgcctggtttgactataatagtgttcatgcc
attgagcggagggctctccccgagttctttaacggcaagaacaagtccaagactccagaa
atctacctggcttatcgaaacttcatgattgacacgtaccggctgaacccccaagagtat
ctcacctccaccgcctgccgcaggaacctggctggtgatgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtcttattaactaccaggtggatgcagagagtcgacca
accccgatggggcctccgcccacctctcacttccatgtcttggcagacacgccatcaggg
ctggtgcctctgcagcccaagaccccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccagcaaatgctcaacttccctgacaaaggcaaagagaagccg
acagacatgcagaactttggcctgcgcacagacatgtacacaaagaagaacgtccccgcc
aagagtaaagctgcggccagtgccactcgagagtggacggaacaggagacgctgctcctc
ctggaggcactggaaatgtacaaagatgactggaacaaagtgtcagagcacgtgggaagc
cgcacgcaggatgagtgcatcttgcattttcttcgtcttcccattgaagacccgtacctg
gaggactcagaggcctccctgggccccctggcctaccagcctatccccttcagtcagtca
ggcaaccctgttatgagcactgttgccttcctggcctctgtcgtcgatcctcgagtcgcc
tctgctgctgcgaagtcggccctagaggagttctccaagatgaaggaggaagtgcccacg
gccttggtggaggcccacgtccggaaagtggaggaggcagccaaagtgacgggcaaggca
gacccggccttcggtctggagagcagcggtatcgcaggaaccacctctgatgagcctgag
cggattgaggagagcgggacggatgaggcacggacagagggccaggccacagaggagaag
aaggagcccaaggaaccccgagaaggagttggggctgccgaagaagaaacaaaggagaag
accagcgaggtccccaagaaggacgaagagagagggaaacaaggtgacagcgagaaggag
tcagagaagagtgacggggaccccatagttgacccggacaaggagaaggagccaaaggaa
gggcaggaggaagtgctgaaggacgtggtggagtcggagggggagaggaagacgaaggtg
gagcgggacatcggtgagggcaatctgtccaccgccgccgctgccgccctggccgccgcc
gctgtgaaggccaagcacctggccgccgtggaggagaggaagatcaaatcgctggtggcc
ctgctggtggagacccagatgaaaaagttggagatcaaactccggcactttgaagagttg
gagaccatcatggaccgggagcgagaggcactggagtatcagaggcagcagctcctggcc
gacagacaagccttccacatggagcagctgaagtacgcggagatgagggcccggcagcag
cacttccagcagatgcaccagcagcagcagcagcccccgccagccctgccgccgggctcc
cagcccgtcccaccggcgggcactgccgggccgcccgcgcttcacagcctggctatggct
ccagcctccgtcgcccctgcccccgctggcggtggggctccccccggaagcttgggcccc
tctgaacagattgggcaggcagggtcagccgcggggccacagcagcagcaaccagctgga
gccccccagcctggggcagtcccaccaggggtacccccccctggaccccatggcccctcg
ccgttccccaaccaaccaactcctcccgcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcct
cctcccgctccatccatcatcccatttggtagtctagccgactccatcagtattaacctg
ccccctcctcctaacctgcatgggcatcagcaccatctcccgtttgccccgggcactctc
cccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgacc
accaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccagagc
cctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagac
ccaggtacccccctgcctccagaccccacggccccgagcccaggcacagtcacccctgtg
ccacctccacagtga
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integrated database retrieval system
