Zalophus californianus (California sea lion): 113921965
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Entry
113921965 CDS
T07874
Name
(RefSeq) LOW QUALITY PROTEIN: histone-binding protein RBBP4-like
KO
K10752
histone-binding protein RBBP4
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03082
ATP-dependent chromatin remodeling
zca03083
Polycomb repressive complex
zca04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113921965
03083 Polycomb repressive complex
113921965
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
113921965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113921965
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
113921965
Histone modification proteins
HAT complexes
HATB complex
113921965
HDAC complexes
Sin3A-HDAC complex
113921965
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
113921965
PRC2.2
113921965
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
113921965
Heterochromatin formation proteins
Other heterochromatin formation proteins
113921965
Chromatin remodeling factors
NuRD complex
113921965
NuRF complex
113921965
NuRF complex (fruit fly)
113921965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WD_LRWD1
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
ANAPC4_WD40
Beta-prop_DCAF4
eIF2A
Beta-prop_RIG_1st
Beta-prop_SPT8
CagA
Motif
Other DBs
NCBI-GeneID:
113921965
NCBI-ProteinID:
XP_035577679
UniProt:
A0A6P9EVW8
LinkDB
All DBs
Position
9:49468917..49470197
Genome browser
AA seq
426 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWXKNTPFLYDLVMTHALEWPSLTAQWLADVTRPEGKD
VGIHRLVLGTHTSDEQNHLVIASVQLPNNDAQFDASHYDSEKAEFGGFGSVGGKNEIEIK
INHEGEINWARYMPQNPCIIATKTPSSDVLFDDTEHPPKPDTSGECNPDLHLRGLQKEGY
GLSWNSNFSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVDVSWHLLHESL
FGSIADDQKLMTWDTRSNNTSKPRHSVDAHTAKVNCLSFNLYSEFILATGSANKTVALWD
LRNLKLKLHSFESHKDEIFQIQWSPHNETILASSGTDRRLKVWDLSKIGEERSPEDAEDA
EDGPPELLFIRGGHTAKTSDFSWNPNEPWVICSVSEDSIMQVGQMAENIYNDEDPEGSVD
PEGQGS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggaagcagcctttgatgatgcagtagaagaacgtgtgatcaatgaagag
tacaaaatatggnaaaaaaacaccccttttctttacgatttggtgatgacccatgctctg
gagtggcctagcctaactgcacagtggcttgcagatgtaaccagaccagaagggaaagac
gtcggcattcatcgacttgtcctgggaacacacacgtcagatgaacaaaaccatcttgtg
atagccagtgtgcagctccctaacaatgatgctcagtttgatgcttcacattacgacagt
gagaaagcagaatttggaggttttggctcagttggtggaaaaaatgaaatagaaatcaag
atcaaccatgaaggagaaataaactgggcgcgttatatgccccagaacccttgcatcatt
gcaacaaagactccgtccagtgatgttctttttgacgatacagaacatcctcccaaacca
gacacttctggagagtgcaacccagacttgcatctgcgtggacttcagaaggaaggctat
ggactttcttggaactcaaatttcagtgggcacttacttagtgcttcagacgaccatacc
atctgcctctgggacatcagtgctgttccaaaggaaggaaaagtggtggatgcgaagacc
atctttacaggacatacagcggtagtagatgtttcctggcatctgcttcatgagtctctg
tttgggtcaattgctgatgatcagaaacttatgacctgggatactcgttcaaacaatact
tccaaaccaagacactcagttgatgctcacactgctaaagtgaactgcctatctttcaat
ctttatagtgagttcattctggccacaggatcagccaacaagactgttgccttgtgggat
ctgagaaatctgaaacttaagttgcattcctttgaatcacataaggatgaaatattccag
attcagtggtcacctcacaatgagacgattttggcttccagtggtactgatcgcagactg
aaagtctgggatctaagtaaaattggagaggaacgatccccagaagatgcagaagatgca
gaagatgggccaccagaattgttgtttattcgtggtggtcacactgccaagacatctgat
ttctcctggaatcccaatgaaccttgggtgatttgttctgtatcagaagacagtatcatg
caagtggggcaaatggcagagaacatttataatgatgaagatcctgaaggaagcgtggat
ccagaaggacaagggtcctag
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