Zalophus californianus (California sea lion): 113922651
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Entry
113922651 CDS
T07874
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04110
Cell cycle
zca04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113922651 (SMC1B)
04114 Oocyte meiosis
113922651 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113922651 (SMC1B)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113922651 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
113922651 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
ATG16
Motif
Other DBs
NCBI-GeneID:
113922651
NCBI-ProteinID:
XP_027450603
UniProt:
A0A6J2D8D5
LinkDB
All DBs
Position
9:4453028..4523138
Genome browser
AA seq
1235 aa
AA seq
DB search
MGHLELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANLRVKN
IQELIHGAHIGRPVSSFASVKIVYVEESGEEKTFTRIIRGGCSEFHFDDNPVSRSVYIAE
LEKIGIIIKARNCLVFQGTIESISMKKPKERTQFFEEISTSGELIGEYEEKKRKLQKAEE
DAQFNFNKKKNVAAERKHAKLEKEEAECYQSLLEELKMNKIQLQLFRLYHNEKKIHFLNT
ELERVSRDLSVTKESLSHHENIVKTKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQVEEEILY
KGRDIELEASQLDHYKELKEQVRKKVAIMTQPLKKLQWEQKADKERLAFEKRRHGEVQEN
LKQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVREIENTKSRMSEVNEELNLI
KSELQNAGIDNHEGNRQQKRAEVLEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMVIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARSWDEKEIKNLRDRRAQLIQELKDLMKILRKEADLKQIQTLVQGTHTRLKYSQSELE
MIKKKHLAAFYREQSQLQSELLNIESQCTMLSEAIKERQQRIEEFQEKIDKVEDEIFQHF
CEEIGVENIREFEKKHVKQQQEIDQKRLEFEKQKTRLNVQLEYSRNQLKKRLSKINTLKE
TIQRGREDIDDLKQAEENCLQIVDELMAKWQQLKDVFVTQNANAEKVQAQLEEERKKFLA
IDREVGKWQKEIVIIQTSLEQKRLEKHNLLLDCKVQDIEIALLLGSLDDIIEVELGTEAE
STQATVDIYEKEAAIKVDYSSLRDDLKALQTDKEVEAHLRLLLQQVASQEDNLLKTAAPN
LRALEKLKTVRDKFQESTDAFEASRKEARMCRQEFEQVKKRRYDLFSRCFEHVSISIDQI
YKKLCRNVSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKQQTQEQFQMIIISLKEELYSKADALIGVY
PEHDDCMFSRVLTLDLSQYPDTEDQEGSKRNRELP
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggccacctggagctgctgctcgtggagaactttaagtcgtggcggggccgccaggtc
atcggccctttcaggaggttcacctgcatcattggccccaatggctccggaaaatctaat
gtaatggatgcacttagttttgtaatgggagagaaaacagctaatttaagagtgaaaaat
attcaagaactcattcatggagcacatatcggaagacctgtctcttcttttgcaagtgtg
aaaattgtgtatgtggaggaaagtggagaagagaaaacatttacaaggattatccgaggg
ggatgctcagaatttcattttgatgataatccagtgagtcgttctgtgtatatagctgag
ctggaaaaaataggcataataattaaagcacggaactgtctagtgtttcagggaactata
gagtcgatttcaatgaaaaaacccaaagaaagaacccagttttttgaggaaatcagcact
tcaggagagcttataggagaatatgaggaaaagaaaagaaagttacagaaagctgaagag
gatgcacagtttaattttaataagaaaaaaaatgtagccgcagaacgcaaacacgcaaaa
ttagagaaagaagaggcagaatgttaccagagtctccttgaagaactgaaaatgaacaag
atacaattacagcttttccgactatatcataatgagaagaaaattcatttcctgaacact
gagttagagcgtgtgagtagggacttgagtgtcacaaaagagtctctttctcatcacgaa
aacatagtgaaaaccaagaagaaggaacatggaatgctaaccagacaactacaacaaaca
gaaaaagaattaaaatctcttgaagcgcttttaaatcagaaaaggcctcaatacattaaa
gccaaagaaaacacttctcaccacctcaagaaattagacgtggctaagaaatcaataaag
gacagtgagaaacagtgttctaaacaggaagatgacataaaagccctggagacagagctg
gttgatttagatggtgcatggagaagttttgaaaagcaggttgaggaagaaatcttatac
aaggggcgagacattgaactagaagccagtcagctggatcattacaaagaacttaaggaa
caagtgagaaagaaagtggctataatgacccaaccgctgaagaagttgcagtgggaacag
aaggctgacaaagaaagactggcgtttgaaaagaggaggcatggagaagttcaggaaaat
ctaaaacaaataaaagaacagatagaagatcataaaaaacgaatagagaagttggaggag
tatacaaaaacatgcatggattgcttgaaagagaaaaaacagcaagaggaaaccctagtg
cgtgaaattgaaaacacaaaatcacgaatgtctgaagttaatgaggaattgaatcttatt
aaaagtgaattgcagaatgctggaattgataaccatgaggggaaccgtcagcaaaagaga
gcagaggttctggagcaccttaaaagactttacccagattctgtgtttggaagactactt
gacctctgtcatcctattcataagaaataccagctggctgttactaaactttttggccgg
tacatggttgccattgtcgtagcctctgaaaaggtagcaaaagattgtattcgatttctg
aaggaagaaagagctgaaccagagacattccttgctctagattaccttgatatcaagcca
atcaatgaaagattaagggagattaaaggctgtaaaatggtgattgatgtcataaagact
cagtttcctcagctgaagaaagtaattcagtttgtgtgtggaaatggccttgtctgtgag
actgtggaagaagcaaggcatattgcattcggtggacctgagagacggaaaacagtagct
cttgatggaacattatttttaaaatctggggtgatctctggagggtcaagtgacttaaaa
tacaaagctagaagctgggatgagaaggagataaagaacttaagagacagaagagcccag
ctgatccaggagttaaaggatttaatgaagatacttcgcaaggaagcagatttgaaacaa
atacagactctagtacaaggaactcatacacgactcaaatattcgcaaagtgaactagag
atgattaaaaagaagcaccttgctgctttttaccgggaacaatctcagctacaaagtgaa
ctgctaaatattgagtctcagtgtactatgttgagtgaagcaatcaaagaacggcaacaa
agaattgaagaatttcaagaaaagatagataaggtagaagatgagattttccaacacttc
tgtgaagaaattggtgtggaaaatattcgtgaatttgagaagaaacatgttaaacagcaa
caagaaattgatcagaaaagattagaatttgagaaacaaaaaactcgtcttaatgttcaa
ctcgaatatagtcgcaatcagctgaagaagagactgagtaagatcaacacgttgaaagaa
accatccagagaggcagagaggacattgatgacctaaagcaggctgaagaaaattgtctg
caaattgtggatgaactcatggcaaagtggcagcaacttaaggacgtatttgtcactcag
aatgccaacgctgagaaggtccaagctcagctggaagaagaacggaagaaatttttggct
attgatagggaagtgggaaaatggcaaaaagaaattgtaatcattcaaacttctttggaa
cagaaacggctagagaagcataatctgctgcttgattgcaaagttcaagacattgaaata
gcccttttgttgggatcactggatgacatcattgaagtggagttgggaactgaagcagaa
agtacccaggcgacagttgacatctatgagaaagaagcagccatcaaggtagactacagc
tctctaagagatgatttgaaggctctacaaactgataaggaagtggaggcccacctgagg
ctcctgctgcaacaggtggcatcccaggaagacaacctcttgaagactgcggccccaaac
ctgagagccctggagaaactaaagacggtcagagacaagtttcaggagtccacagatgct
tttgaggccagcagaaaggaagccagaatgtgtaggcaagagtttgaacaggtgaaaaaa
aggagatatgaccttttcagccggtgttttgagcacgtctcgatctcaattgatcaaatc
tacaagaagctctgcagaaacgtcagtgcccaagcatttcttagcccagagaacccagaa
gagccttacctagagggaattagctataactgcgtggctccaggcaaacggttcatgcca
atggacaatctgtcagggggagaaaagtgtgtggccgcgttagccctcctgttcgccgtg
cacagttttcggcccgctccgttctttgtgttagatgaagtggatgcagctctggacaac
acgaacattggcaaggtctcaagttacatcaaacagcagacgcaggagcagtttcagatg
ataatcatttccctaaaagaggagttatattccaaagccgatgcgctgataggcgtctat
ccagagcacgacgactgcatgttcagcagagttctgaccctggatctttctcagtatcca
gacaccgaagaccaagaaggcagcaaaagaaaccgagagttgccttag
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