Zalophus californianus (California sea lion): 113922843
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Entry
113922843 CDS
T07874
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zca03016
]
113922843 (TARBP1)
03036 Chromosome and associated proteins [BR:
zca03036
]
113922843 (TARBP1)
Enzymes [BR:
zca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
113922843 (TARBP1)
Transfer RNA biogenesis [BR:
zca03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
113922843 (TARBP1)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
113922843 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Retrotran_gag_2
Motif
Other DBs
NCBI-GeneID:
113922843
NCBI-ProteinID:
XP_027450980
UniProt:
A0A6J2D3J8
LinkDB
All DBs
Position
15:13953560..14034811
Genome browser
AA seq
1615 aa
AA seq
DB search
MEWVLAETLLSQSRDPRVLLGALCRGEASAERLETLRFLLQRLEDEEARGGGGGAGALPE
AAREVAVGYLVPLLRGLRGHPAGGSDPGPPARHPRRVLRAASAALRSCARLAGGPQLAAA
LAEEALRDLLAGGPAPGAEAAVEVLAAVGPCLRPREDGPLLERVAQAALALALGADGDRD
EAGPAEDAAALAAGRLLPALGQCGGAVLGAVWSGLVAAGAPSGPGRVGLQLLVLSALAER
LLPEPGADRGPGAGEEDPDARRCWRFWRTVQAGLAQAQDALTRKRARYLLQRAVEVSAEL
GTHCTCGPQEGNGPSLFWWSEKKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNSLF
EYAVSEENGCWLFHPSWHICIYKRMFESENKILTKEGVIHFLELYETKILPFSPEFSEFI
IGPLMDALSESSLYIRSPGQLIGSGSPLGLKLQKFLVTYVSLLPEEIKSSFLLKFIQKMT
SRHWCAIPILFLSKALASVPRCKALGIEGLLALRDVLQCTMITHQILLRGAAQCYLLQTA
MNLVDVEKVSLSDVSAFLMSLRQEESLGRGTSLWTELCDWLRVNESCFRRASASISIGLP
ETSSLNAYVKNLVQDYIKSPAWETGEDCLMPDWFEAKLVAMMVLLAVDVEGMKAQYSEKR
RTQNVLRIFLDPLLESLMKFGTNAYMPLLETDRCLQVLLKLLHTCMLKGSSAQDDEVFTF
LQSFVMSTTESVSDFILRRLTMNELSSVSDLDRCHLYLMVLTELINIHLKVGWKRGNPIW
RVISLLKNASIRHLQEIDSGQEPTLARQIQRVISMAALAMVCEAIDQKPELQLDSLDAGP
MERFLSSLPLNHTLPKPHVEEQSSFFEESSASQGWGKIVAQYIHDQWVCLSFLLRKYHTL
IPVSDGDVLEHILPAIQMPVRTLQSALGALTVLPSDQVLPVFHCMKVLVPKLLTSSESLC
VESFDMAWKIISALSNTQLIFWSNLKAFVQFVFDTKVLTIAAKIKGQAYFKIKEIMYKII
EMSAVKTGVFNTLISYCCKSWIVSASNVSQVSLSSAKNYSELVLEACIFGTVFRRDQRLI
QDVQTYIENLGHDCAANTLIENTKREDHYVRICAVKFLCLLHGSNVSHKLFMEDLAIKLL
DKDELVSKSRTRYYVNSQQHRLKNRIWQTLLVLFPSFDQSFLNRIIDKIFQAGFINNQAS
IKYFIEWIIILILHKFPQFLLKFWDCFSYGEENFKTSICTFLSVLSHLDIITQNIPEKKP
VLKQALIIVLQWCFSHNFSIRLYALVALKKIWSMCKTLHVEEFDALTSVIESSLNQVENM
PGTGNAKKNWQRIQEHFFFAAFHPVQDYCLETIFYILPRLSGLVEDEWIAIGKFTRFTDI
PLDAGFQWYLSPTRLCEVKPGDWAQQDIGSHSGEADSQSEWMDVQKKIIPWKNNTPDLDL
ELVFQDRVAKLGKSISRLIVAASLIDKPTNLGGLCRTCEVFGASALVVGSLQCVRDKQFQ
GLSVSAEQWLPLVEVKPPQLIDFLQQKKAEGYTVIGVEQTAKSIDLTQYSFPERSLLLLG
NEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLRHGDTES
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggtcctcgcggaaacgctgctatcgcagagccgggacccccgggtcctgctt
ggggcgctgtgtcgcggggaagcgtccgcagagcgcctggagacgctgcgctttctgctg
cagcgactcgaagacgaggaggcgcgcgggggcggcgggggcgcgggcgcgctcccggag
gcggcgcgcgaggtcgcagtcgggtacctggtgccgctgctgcggggcctgcgcgggcac
ccggcgggcggctcggaccccggcccgccggcccgccacccccggcgcgtgctgagggcg
gcgagcgccgctttgcgctcgtgcgcccgcctcgctgggggcccgcagctggcggccgcc
ctggcggaggaggcgctgcgcgacctgctcgccggggggcccgcgcccggagccgaggcg
gccgtggaggtgctggcggcggtcgggccctgcctgcggccccgcgaggacgggccgctg
ctggagcgggtggcgcaggccgccctcgctctggcgctgggcgccgacggggaccgggat
gaggcggggcccgcggaggacgcggcggcgctggcggccgggaggctgctgccggcgctg
ggccagtgcggcggggctgtgctgggggccgtatggagcgggctggtcgcggccggggcg
ccctctgggccgggccgcgtcgggctgcagctgctggtgctgagcgccctggccgagagg
ctgctgcccgagcccggcgccgaccgcggtcccggagccggcgaggaggaccccgacgcg
cggcgctgctggcgcttctggaggacggtgcaggcggggctggcgcaggcccaggacgcc
ctgacgcgcaagcgagcgcgctacctgctgcagagggcggtggaggtgtcggcggagctg
gggactcactgcacctgcggcccccaggaaggaaacggcccaagtctgttttggtggtct
gagaagaagaaagatgagcttctaaagttttgggaaaactatattttaattatggaaact
ctagaaggaaatcagatccacgttataaagccagttttaccaaagctaaacagtctgttt
gaatatgcagtgtcagaagaaaatgggtgttggctctttcacccgtcctggcatatatgt
atttataaaagaatgtttgaaagtgaaaataaaatcctgaccaaagaaggtgtcatccat
tttttggagctgtatgaaacaaagattcttccgttttcaccagaattttctgagtttatt
attggaccattaatggatgcactttcagagagctctctatacatcaggtccccaggccag
ctgataggaagtggttctccattgggattgaaattacagaagtttttagtcacttatgtt
tctcttcttccagaagaaataaagagcagtttcctattaaagtttattcagaagatgaca
agtagacattggtgtgccattcccattttgtttctgtctaaggctttggcaagtgtccca
agatgtaaagccctgggtatagaagggcttcttgctctcagggatgttcttcagtgcact
atgatcacccatcagattctactcagaggggcagctcagtgctatcttcttcagacagct
atgaatttggtagatgtggagaaggtgtcactttcagatgtttcagcttttctcatgtct
ctgagacaagaggagtccttaggacgaggaacctcattgtggacagagctctgtgattgg
ttgcgtgttaatgaaagctgttttaggcgagcctcagcttctatctccatcggacttcct
gagacatcctctttaaatgcttacgtgaagaacctagttcaagattatattaagtcacct
gcttgggaaacgggagaagactgccttatgcctgactggtttgaagccaagcttgttgca
atgatggtcttgctggccgtagatgtggaaggaatgaaggctcagtacagtgaaaagcgg
agaacacagaatgtattaaggatattcttagatcctcttctggaatcccttatgaagttt
ggtacaaatgcctacatgcccttgctggaaactgacagatgcctccaggtcctgttgaag
ttattgcacacttgcatgttgaaaggttccagtgcccaagatgatgaggtgtttacattt
cttcagagctttgtcatgtctaccaccgagagtgtttccgactttatcctccgacggctt
actatgaatgaactaagtagtgtttcggatctggatcgttgccatttatacctgatggtg
ttaactgagcttataaatatccatttgaaggttgggtggaaaagaggcaaccccatttgg
agagttatttctcttctgaaaaatgcatccattcggcatcttcaagagatcgacagtgga
caggagccgacacttgccaggcagattcagagggtcattagtatggctgccttggccatg
gtgtgtgaggctattgaccagaagccagaactacagctcgactccctggatgccggaccc
atggaaaggttcctctcctctctcccgctcaaccacacactgccgaagccccacgtggag
gagcagagcagtttttttgaagaatcatcagcttcccaaggatgggggaaaatagtcgca
caatatattcatgatcagtgggtctgcctctctttcttgttgagaaaatatcacaccctt
atcccagtgtcggatggtgatgttctggagcacatcctgcctgctattcagatgccggtg
aggactctgcagtccgcgctaggagccctcacagtcctgccttcggaccaagttctgcct
gtgttccactgcatgaaagttctggttcccaagcttttgacctcctctgaatcactctgt
gtagagtcttttgacatggcttggaaaattatatctgcgttaagcaacactcagctgata
ttctggtctaatttaaaagcttttgttcagtttgtttttgataccaaagttcttaccatt
gctgcgaaaatcaagggccaggcatatttcaaaataaaagagattatgtacaagataatt
gaaatgtctgctgtaaaaactggagtcttcaatacactcataagttattgctgcaaatct
tggatagtttctgcttcaaatgtgtcccaagtatctttatcaagtgctaaaaattatagc
gaacttgtccttgaggcttgtatatttggaactgtgtttaggcgtgatcaaagacttatt
caggatgtgcagacctacatagaaaatctcggacatgattgtgcagcaaacacacttatt
gaaaatactaaaagagaagaccactatgtgagaatttgcgctgtcaaattcctgtgttta
ttacatggctcaaatgtgtctcataagttgtttatggaagatcttgcaatcaagctatta
gataaagatgaattggtgtccaagtccagaactcggtactacgtgaactcccagcagcac
cggctgaagaaccggatatggcagacgctgctggtgcttttccccagctttgatcagagt
ttcttgaatagaattattgacaagattttccaggccggtttcatcaataatcaagcatcc
ataaaatattttatagaatggattattatattgattcttcataaatttcctcaatttctt
ctgaagttctgggattgtttttcttatggtgaagaaaactttaaaacaagcatttgtaca
tttttatccgttttgtcacatttggacatcatcactcaaaatatcccagaaaagaaacca
gttctgaagcaagcccttattatcgtgctgcagtggtgcttcagtcacaactttagtatc
cgactatatgccttagtcgctcttaagaagatctggagcatgtgtaagaccctgcacgtt
gaagaatttgatgctttgacttctgttattgaatccagtctcaaccaggtggaaaacatg
cctggaacagggaacgccaagaagaattggcaacgcatccaggagcatttcttttttgca
gcatttcacccagtgcaggattattgtctggagaccatattttacatccttccacgcctt
tcaggcctggttgaagacgaatggattgccattggtaaatttaccagattcactgacatt
cctttagatgcaggatttcagtggtacctttcgccaactcgcctctgtgaagtaaaaccg
ggtgactgggctcagcaggacataggttctcactcgggcgaagcagatagccagtcagag
tggatggatgttcagaagaagattatcccctggaaaaataacactccagatttagatctg
gagctagtatttcaggatcgtgtcgccaaacttggaaagtcgattagcagactgattgta
gcggcctcgctcattgataaaccaactaacttaggagggctgtgccggacctgtgaggtg
ttcggggcctcggcgctcgtggtgggcagcctgcagtgcgtcagagacaagcagttccaa
ggcctcagtgtctcagcagagcagtggttgcctttagtggaggtaaaaccacctcagctc
atcgattttctgcagcagaaaaaagcagaaggttacaccgtcattggcgtggaacagact
gccaagagtatagacctgacccagtacagctttccggagagatctctgctcttgttggga
aatgaacgtgagggaattccagcaaatctgatccaacaattggatgtttgtgtggaaatt
cctcagcagggcattatccgctcgcttaacgtgcacgtgagtggggctctgctcatttgg
gaatatacccgacagcagctgctcaggcatggggacaccgagtcgtga
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