Zalophus californianus (California sea lion): 113923343
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Entry
113923343 CDS
T07874
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04510
Focal adhesion
zca04520
Adherens junction
zca04670
Leukocyte transendothelial migration
zca04810
Regulation of actin cytoskeleton
zca04820
Cytoskeleton in muscle cells
zca05100
Bacterial invasion of epithelial cells
zca05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113923343 (VCL)
04520 Adherens junction
113923343 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113923343 (VCL)
04810 Regulation of actin cytoskeleton
113923343 (VCL)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
113923343 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113923343 (VCL)
09174 Infectious disease: parasitic
05146 Amoebiasis
113923343 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zca04812
]
113923343 (VCL)
04147 Exosome [BR:
zca04147
]
113923343 (VCL)
Cytoskeleton proteins [BR:
zca04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
113923343 (VCL)
Exosome [BR:
zca04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113923343 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
113923343
NCBI-ProteinID:
XP_027451657
UniProt:
A0A6J2D9Y5
LinkDB
All DBs
Position
15:34641800..34752604
Genome browser
AA seq
1183 aa
AA seq
DB search
MGRGARRAGYAEGSPVSVVAARSRSFSGFPAPPFPILCSPRFAAPLAAAMPVFHTRTIES
ILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILK
RDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEV
RKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVML
VNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLT
SWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGE
LCAGKERREILGTCKMLGQMTDHVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAA
RKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDI
LRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAV
HLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVDQL
TAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAV
AATAPPNAPSREEVFDERAANFEHHSGRLGATAEKAAAVGTANKSTVEGIQASVKTAREL
TPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIK
KDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELS
KTISPMVMDAKAVAGNISEPGLQKSFLDSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQ
LRLADELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMMAARQLHDEARK
WSSKPGNRAAEVGIGVVAEADAADAVGFPVPPDMEDDFEPELLLMPSNQPVNQPILAAAQ
SLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTR
LAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEML
VHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggggcggggcgcccgcagggctggttacgccgagggaagcccggtctccgtagttgct
gctcgcagtcggtctttcagcgggttcccggccccgccgttcccaattctctgtagcccg
cggttcgccgccccgctagctgccgcgatgccggtgtttcatacgcgcacgatcgagagc
atcttggagccggtggcgcagcagatctcgcacctggtgatcatgcacgaggaaggcgag
gtggacggcaaagccatccctgacctcaccgctcccgtggccgccgtgcaggcggccgtc
agcaaccttgtccgggttggaaaagagactgttcaaaccactgaggatcagattttgaag
agagatatgccaccagcatttattaaggttgagaatgcttgcaccaagcttgtccaggca
gcccagatgcttcagtcagacccttactcggtgcctgctcgagattatctaatcgatggg
tcaaggggcatcctctctggcacatcagacctgctcctcaccttcgatgaggctgaggtt
cgtaaaattattagagtttgcaaaggaattttggaatatcttacagtggcagaggtggtg
gaaactatggaagatttggtcacctacacaaagaatcttggaccaggaatgacaaagatg
gctaagatgattgatgagaggcagcaggaactgactcaccaggaacaccgagtgatgttg
gtgaactccatgaacaccgtgaaggagttgctgccagttctcatttcagctatgaagatt
tttgtaacaactaaaaattcaaaaaaccaaggaatagaagaagctttgaaaaaccgcaat
tttactgtagagaagatgagtgctgaaattaatgagatcattcgtgtattacaactcact
tcttgggatgaagatgcctgggccagcaaggacactgaagccatgaagagagcattggcc
tcgatagactccaagctgaaccaggccaaaggttggctccgtgatcccagtgcctcccca
ggggatgccggtgagcaggccatcagacagatcttagatgaagctggaaaagttggtgag
ctctgtgcaggcaaagaacgcagggagatcctgggaacctgtaaaatgctggggcagatg
actgatcacgtggctgacctccgagccagaggacaaggggcctcaccggtggccatgcag
aaagcccagcaggtgtcgcagggtctggacgtgctcacagcaaaagtggaaaatgcagcc
cgcaagctggaagctatgaccaactccaagcagagcattgccaagaagattgatgctgct
cagaattggcttgcagatccaaatggtggaccagaaggagaagaacagattcgaggggct
ttggctgaagcccggaaaatagcagaattatgtgatgatcctaaagagagagatgacatt
ctacgttctcttggggaaatatctgctctgacttctaaattagcagatctccggagacag
ggcaaaggagattccccagaggcccgagcattggccaaacaggtggccacagctctgcag
aacttgcagaccaaaaccaatagagctgtggccaacagcaggcctgccaaggcagctgtc
cacctggagggcaagattgagcaagcacagcggtggattgataatcccacggtggatgat
cggggcgttggtcaggctgccatccgggggcttgtggccgaagggcatcgtctggctaat
gtcatgatggggccgtatcgccaagatcttcttgcaaagtgtgaccgcgtggaccagctg
acggcccagctggctgacctggctgccagaggggaaggagagagtcctcaggcgagagcc
cttgcctctcagctccaagactccttaaaggatctgaaagcccggatgcaggaggcgatg
actcaggaggtgtcagacgttttcagcgataccacaactcccatcaagctgttggcggtg
gcggccactgcacctcctaatgctcccagtagggaggaagtatttgatgagagggcagct
aactttgagcaccattcgggaaggcttggtgccacggcggagaaggcagctgctgttgga
actgctaataaatccacggtggaaggcattcaggcatcagtaaagacggcccgagaactc
acaccccaggtcgtctcggctgctcgcatcttacttaggaatcctggaaatcaagctgct
tacgaacattttgagaccatgaagaaccagtggatcgataatgtcgaaaaaatgacaggg
ctggtggacgaagctattgataccaaatctctgttggatgcttctgaagaagcaattaaa
aaagacctggacaagtgtaaagtagccatggccaacatccagccgcagatgttggtcgcc
ggggcaaccagcatcgcccgccgggccaaccgtatcctgctggtggccaagagggaagtg
gagaactcagaggaccccaagttccgtgaggctgtgaaagctgcctctgacgaactgagc
aaaaccatctcccccatggtgatggacgcaaaggctgtggctggaaacatctctgagccc
ggcctgcaaaagagcttcctggactcaggatatcggatcctgggagctgtggccaaggtc
agagaagccttccaacctcaggagcctgacttcccgcctcctcctccggatcttgagcag
ctccgtctggcagatgagcttgctcctcccaaaccacctctgcctgagggtgaggtccct
ccgcccaggcccccacctccggaggagaaggatgaagagttccctgagcagaaagccggg
gaggtgattaaccagccaatgatgatggctgccaggcagctccatgatgaagctcgcaaa
tggtccagcaagccgggtaaccgggccgctgaggtgggtataggtgttgtagctgaggca
gatgcggccgatgctgttgggttccctgtcccccctgacatggaagacgatttcgaacct
gagctgctgttaatgccatccaatcagccggtcaaccagcccattctggccgcggctcag
tccttgcatcgcgaagctaccaagtggtctagtaagggcaatgacatcattgcagcagcc
aagcgcatggctctgctgatggcggagatgtctcggctggtaagagggggcagcggtacc
aagcgggcactgattcagtgtgccaaggacattgccaaagcctcagatgaggtgacgcgg
ttggccaaggaggttgccaagcagtgcacagataagcggattagaaccaacctcttacag
gtatgcgagcgaatcccaaccataagcacccaactcaagatcctgtccacggtgaaggcc
accatgctgggccggaccaacatcagtgacgaggagtctgagcaggccacagagatgctg
gttcacaatgcccagaacctcatgcagtctgtgaaggagactgttcgagaagcagaagct
gcttcaatcaaaattcgaacagatgctggatttacactgcgctgggttagaaagactccc
tggtaccagtag
DBGET
integrated database retrieval system
