Zalophus californianus (California sea lion): 113923365
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Entry
113923365 CDS
T07874
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113923365 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113923365 (ERCC6)
03400 DNA repair and recombination proteins [BR:
zca03400
]
113923365 (ERCC6)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
113923365 (ERCC6)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
113923365 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
113923365
NCBI-ProteinID:
XP_027451729
UniProt:
A0A6J2D6L5
LinkDB
All DBs
Position
15:complement(47815147..47892627)
Genome browser
AA seq
1482 aa
AA seq
DB search
MQNARIPHSSQTQEQDCLQSQYVSDRQEMTIKQENDDNAEVEESLPSCSSANGPSTSAEG
CSSEVPRRGPALLHIDRHQIQTVEPSAQALELQGLGVDVYDQDVLEQGVLRQVDSAIHEA
SRAAQLADAEKEYRSVLDDLTSCTTSLKQINKIIEQLSPQAATNRDINRKLDSVKRQKYN
KEQQLKKITAKQKRLQAILGGAEVQVELDHASLEEEGVEPGPSCLGSMLMPVQETAWEEL
IRTGQMTPFGTQIPQKQEKKPRKLMLNEASGFEKYLADQAKLSFERKKQACNKRAARKTV
ASVTSELSATLPENKPNERSKVLSKTDKRLKKHIKKLQKRALHFQGKVGLPKGKKPLESD
MRPKAEGDSEGDESEYLPTEEELEGAGGAELPGEGTHYDLKPGLTPRKRQRKVTVQEIED
DFFPSSGEEAEAACGGGGRKVVRCRDDGDEDYYKQRLRRWNKLRLRDKEKCLKLEDDSEE
SDAEFDDFKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGL
SYSKIRTRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKKEK
LIRDIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPH
RIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASLVQVKTAYK
CACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHKVYQNFIDSKEVYRIL
NGDMQIFSGLVALRKICNHPDLFSGGPKNPKGIPDDELEEDQFGYWKRSGKMIVVESLLK
IWHRQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFV
FLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIE
EKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDASQSTETSAIFAGTGSEV
QAPKLHLKRKLPPAFGADRNVPICKKFPDSNVSTNEATSSKEKSTAIGAEVNAVTSDPCN
PLKDAPQTPRTPPGSDGPREDMNTVSRLEESSVISGHGDCSDSLRISKMDGLSSEENINE
KQGLSNRRESCQAQTEPLWENKPSESNFSKHKSKTKHSALEEEPLEQHRTPTQKLKSPKH
RRDAKFEGTRIPHLVKKRRYQKQDSENESETSEQSHDDYVLEKLFKKSVGVHSVMKHDAI
MDGANPDYVLVEAEANRVAQDALKALRLSRQQCLGAASGVPTWTGHRGVSGTPAGTKSRF
GQKRNSSFSVQHPSSTSSTEKCQDGVTRKDGKDNASEHFSGKVEDAESSPGSLSSSLLLA
KMRARNHLILPERLESENAHQEASVPPSSTTEHDDLLVEMRNFIAFQARVDGQASTREIL
QAFESKLSASQSCVFRELLRNLCTFHRTSSGEGIWKLKPEYC
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgcgagaatcccccactcaagtcaaactcaggaacaagactgtttgcaaagt
cagtatgtcagtgatagacaagaaatgacaatcaagcaagagaatgatgacaatgcagag
gtggaggaaagcctcccctcttgttcctctgctaatggaccatccacttctgctgagggg
tgttcatcggaagttccgaggagagggccggctctgctgcacatcgacagacatcagata
cagacggtggagccgagtgcgcaggcccttgaactgcaggggttgggtgtggatgtgtac
gaccaggacgtgctggaacagggtgtgcttcggcaagtggacagtgccattcatgaggcc
agccgtgcggcccagcttgcagatgcggagaaggagtatcgatcagtcctggatgacctc
acgtcatgtacaacatccctaaagcaaatcaataaaattattgaacaacttagccctcaa
gctgctaccaacagagacatcaacaggaaactagattctgtaaaacgacagaagtataat
aaggaacaacagctaaagaagatcacagcaaaacaaaaacgtctccaggccatccttgga
ggagcggaggtccaagttgaactagatcatgccagtctggaggaggagggtgtagaaccg
gggccgtcctgtctcggcagcatgctcatgcctgtccaggagacggcttgggaagagctc
atccgcacgggccagatgacaccttttggaacccagatccctcagaaacaggagaaaaag
cctagaaagctaatgctcaatgaagcatcaggctttgaaaagtatttggcagatcaagcg
aaattgtcttttgaaaggaagaagcaagcttgtaataaaagagcagctagaaaaaccgtg
gcctcggtcacttcggaactgagcgcaacactcccagaaaacaaaccaaatgagcgaagc
aaagttctctcaaaaacagataagcgcttgaaaaaacacatcaagaagctccagaaaagg
gctcttcatttccaggggaaagtgggcttgccaaaaggaaagaaacctctggagtctgac
atgaggccaaaggcagagggtgactctgagggtgatgagtccgagtacttacccacggag
gaggagctggagggggcggggggtgccgagctgccgggagagggcacacactatgacctg
aagcccgggctcacgccccggaaacggcagagaaaagtcacggtacaggagatcgaggat
gacttttttccaagttctggggaggaagcagaagccgcctgtggtggaggaggtcggaaa
gtagtgagatgccgagatgatggagatgaagattattataagcagcggttaaggagatgg
aataagctgaggcttcgggacaaagagaagtgtctgaagctcgaagacgattctgaggag
agcgatgcggagttcgatgattttaaaatgccgggttttctgttcaaaaagctttttaag
taccagcagacaggtgttaggtggctgtgggaattgcactgccagcaggcaggaggaatt
ctgggagatgaaatgggattgggcaagaccatccagataattgccttcttggcaggtctg
agctacagcaagatcaggactcgtggttcaaattacaggttcaaggggttgggtccgact
ataattgtctgtccaacgacagtgatgcatcagtgggtgaaggaatttcatacatggtgg
cctccgttcagagtggcaattctacatgaaaccggctcctatactcaaaaaaaggagaaa
ctaattcgagatattgctcattgtcatggcattttgatcacttcttactcctacattcgg
ctaatgcaagatgacattagcagacatgactggcactatgtgatcttggacgaggggcac
aaaattcgaaatccaaatgctgctgtcactcttgcttgcaaacagttccgcacccctcat
cgcatcatcttgtctggctcaccaatgcaaaataacctccgggagctgtggtcgctcttt
gacttcatcttcccaggaaagttaggcacattgcccgtgttcatggagcagttctcggtc
cccatcaccatggggggatattcaaatgcctccctggtgcaggttaaaacagcctataaa
tgtgcgtgtgtcctacgagataccataaatccatacctgctgcggagaatgaagtcagat
gtcaaaatgagcctttctttgccagataaaaatgaacaggtcttattttgccgtcttaca
gaggaacaacataaagtctaccaaaattttatcgattccaaagaagtttacagaattctc
aatggagatatgcagattttctctggacttgtagccctaagaaaaatctgcaaccaccct
gatctcttttctggaggcccaaagaatcctaaaggtattccagatgatgaactagaagaa
gatcagtttggatactggaaacgctctgggaaaatgatagtagttgagtccttgttgaaa
atatggcacaggcagggtcaacgagtattgctgttttctcagtcaagacaaatgttggat
atacttgaagtattccttagagctcaaaagtattcttacctcaagatggatggtaccact
gcaatagcttcaagacaaccactgattacaagatataatgaggatacatccatatttgtg
tttcttctgaccactcgggtgggtggcataggagtcaacctgacgggggcaaacagagtc
atcatctatgatcctgactggaacccaagcacagacacacaggcccgggagcgcgcatgg
aggataggccagaagaagcaagtgacggtgtacaggctgctgactgcgggcaccattgaa
gaaaagatttaccaccgacaaattttcaaacagtttctgacaaacagagtgctgaaagat
ccgaagcaaaggcgatttttcaagtccaatgatctttatgagctgttcactctgacgagt
cctgacgcatcccagagtactgaaacaagtgctatttttgcaggaactggctcagaagtt
caggctcccaagctccatttaaaaagaaaacttccgccggcctttggagcagaccgtaat
gttccaatatgcaaaaagtttcctgattctaatgtatccacaaacgaggccacatcatct
aaagagaaatctacagctataggagctgaagtgaatgcagtaacttctgatccatgcaat
cctttgaaagatgccccccaaacccctagaactccacctggcagtgatgggcctagagaa
gacatgaacacagtgtctaggctagaggaatcatccgtgattagtggacatggggattgt
tcagattctctgagaatcagcaaaatggacgggctgtctagtgaggaaaacatcaatgaa
aagcagggtctttccaacagaagagaaagctgccaggctcagacagagcctctttgggag
aataagccatcggaaagtaatttttctaagcacaagtcaaaaacgaaacatagtgcactg
gaagaagagcccctggagcagcatcggacaccaacacagaagctgaagagccctaagcat
cgcagagatgccaagtttgaaggaactcgaattccacacctcgtgaagaaaaggcggtac
cagaagcaggacagtgaaaacgagagtgagaccagtgaacagagccatgatgattatgtc
ttggaaaagcttttcaaaaagtcagtcggtgtgcacagtgtcatgaaacacgatgccatc
atggatggagccaatccggattatgtgctggtggaggcagaggccaaccgggtggcccag
gatgccctgaaagcgctgaggctctcccgccagcagtgtctgggagcggcgtctggtgtt
cccacctggacgggccaccggggggtttctggcacaccagcgggaacaaagagtagattt
ggtcagaaaaggaattccagcttctctgtgcagcatccttcttcaacatcttcaacggag
aaatgccaggatggtgtcacaagaaaggatggaaaggataatgcttctgagcacttcagt
ggaaaagtggaagatgcagagtcttcacccgggtccctctcttcgtctttactgttggct
aaaatgagagctaggaaccacctgattctgccagagcggctggaaagtgaaaatgcgcac
caagaggcatctgttccaccatcctccaccactgaacatgatgacctactggtggaaatg
agaaacttcattgcttttcaggcccgtgttgatggccaggccagcactcgcgagatactg
caggcgttcgaatccaagttatcagcctcacagtcttgtgtctttcgagaactgttgcga
aatctttgcacttttcatagaacttctagtggtgaaggaatatggaagcttaagccagaa
tactgctga
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integrated database retrieval system
