Zalophus californianus (California sea lion): 113923458
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Entry
113923458 CDS
T07874
Symbol
DDX21
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zca03009
]
113923458 (DDX21)
03036 Chromosome and associated proteins [BR:
zca03036
]
113923458 (DDX21)
Enzymes [BR:
zca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113923458 (DDX21)
Ribosome biogenesis [BR:
zca03009
]
Eukaryotic type
Pre-60S particles
Helicases
113923458 (DDX21)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
113923458 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
AAA_30
Motif
Other DBs
NCBI-GeneID:
113923458
NCBI-ProteinID:
XP_035580144
UniProt:
A0A6P9F2T1
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All DBs
Position
15:30331946..30357003
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AA seq
795 aa
AA seq
DB search
MPGKLLSDRDLDSDTAMEKVETPRKQNEKKGRKEKPKSNKAEEATEVKEEIISPKAKKVK
KKAESNEVDMNSPKSRKAKTKEEPSQDDIISPKTKSVKKPKESIEKKVVSPKTKKVIKSE
ETSEEEVDAPKPKKMKKEKEVNGEIGEKSPRLKNGFPHSGPVSNSSETLGEESNSELEQE
IPVEQKEGDFSNFPISEQTIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTF
SFAIPLTEKLQGELQDRKRGRAPQVLVLAPTRELANQVSRDFSDITRKLAVACFYGGTPY
GGQIERMRNGIDILVGTPGRIKDHLQNGKLDLTKLRHVVLDEVDQMLDMGFADQVEEILS
VAYKKDSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKC
HWTQRAAVIGDVIRVYSGFHGRTIIFCETKKEAQELSQNVSIKQDAQSLHGDIPQKQREI
TLKGFRNGDFGVLVATNVAARGXRIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGICI
CFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSA
ERLIEEKGAVEALAAALAHISGATSVDQRSLINSDAGFVTMILRCSIEMPNISYAWKELK
EQLSEDIDSKVKGMVFLKGKQGVCFDVPTAAVTEIQEKWHDSRRWQLSVATEQPELEGPR
EGYRGFRGQRDGSRGFRGQRDGSRGFRGQREGNRSFRGQREGNRGFRGQRSGGGNKSNRS
QNKGQKRSFSKAFGQ
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaactccttagtgaccgggacttggactcagacacggccatggaaaaagtg
gagacaccgcgaaagcagaatgagaagaaaggtagaaaagagaagccaaaatctaataaa
gctgaagaggcaacagaagtaaaggaagaaattatttcccccaaagctaaaaaagtcaaa
aagaaagccgagtctaatgaggttgacatgaattctcctaaatccagaaaggcgaaaacg
aaagaggagccatctcaggatgacattatttctcctaaaaccaaaagtgtgaaaaaacca
aaggagtccattgaaaagaaagttgtttctcctaaaaccaaaaaggtaataaaaagtgaa
gaaacttctgaagaagaagtagatgctcctaagcccaagaagatgaagaaagaaaaggaa
gtgaatggagaaattggagagaaaagccccagactgaagaatggattccctcattctgga
cctgtctctaactccagtgaaacccttggggaagaaagtaacagcgagttagagcaggaa
atacctgtggaacaaaaagaaggagatttctctaattttcccatatctgaacagactatt
aaacttctcaaagcccgtggggtgaccttcttgtttcctatacaagcaaagacgtttcac
cacgtctatagtggaaaggacttaattgcacaggcgcggacaggaactgggaagacattc
tcctttgccatccctttgactgagaaacttcagggagaactgcaagaccggaaaagaggc
cgtgcccctcaggtgctggttcttgcacccacgagggagttggcaaatcaagtaagcaga
gacttcagtgacatcacaagaaagctggcagtggcttgtttttatggtgggactccctat
ggaggtcagattgaacgcatgcggaatgggattgatatcctggttgggaccccaggtcgt
atcaaagaccacctgcagaatggcaagctagatctcaccaaacttaggcatgttgtcttg
gatgaagttgaccagatgctggatatggggtttgctgatcaagtggaagagattttaagt
gtggcatacaagaaagattcagaagacaatccccaaacattgcttttttctgcaacttgc
cctcattgggtatataatgttgctaagaaatacatgaaatctacatatgaacaggtggac
ctgattggtaaaaagacccagaaaacggcaataaccgtggagcatctggctatcaagtgc
cactggactcaaagggcagcagttattggggatgtgatacgagtatatagtggttttcat
gggcgcactatcatcttctgcgaaaccaagaaagaagcccaggagttgtcacagaatgtg
tccataaagcaggatgcccagtcattacatggagatattcctcagaagcagagagaaatc
actctgaaaggttttagaaatggtgattttggagttttggttgcaaccaatgttgctgct
cgtgggnntagaatccctgaggttgatctggttgtacagagttcgccaccaaaggatgtg
gagtcctacattcatcgttctgggaggacgggtagagctggaaggacggggatttgcatc
tgcttttatcagcacaaggaagaatatcagttagcacaagtggagcaaaaagcgggaatt
aaatttaagcgaataggggttccttctgcaacagagataataaaagcttccagcaaagat
gccatcaggcttttggattctgtacctcccactgccatcagtcacttcaagcagtcagcg
gagagactgatagaggagaagggggccgtggaagccttggcagcagccctggcccacatt
tcaggagccacatcggtagaccagcgctctctgatcaactcagatgcaggctttgtgacc
atgatcttacgatgctcaattgaaatgccaaacattagttatgcttggaaagaacttaaa
gagcagctgagcgaggatattgattccaaagtgaaaggaatggtttttctcaaaggaaag
cagggtgtttgctttgatgtccctactgcagcagtaacagaaatacaggaaaaatggcat
gattcacggcgctggcagctctcggtggccacggagcagccggagctggaaggaccacgg
gaaggataccgaggcttccggggacagcgggatggcagtcgaggctttcggggacagcgg
gatggcagtcgaggcttccggggacagcgggaaggcaacagaagcttccggggacagcgg
gaaggaaatcgaggcttcagaggacagcgatcaggaggtggcaacaaaagtaacagatcc
caaaacaaaggccagaagcggagtttcagtaaagcattcggacagtaa
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