Zalophus californianus (California sea lion): 113923853
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Entry
113923853 CDS
T07874
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zca03016
]
113923853 (TRUB1)
Enzymes [BR:
zca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
113923853 (TRUB1)
Transfer RNA biogenesis [BR:
zca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
113923853 (TRUB1)
Prokaryotic type
113923853 (TRUB1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
113923853
NCBI-ProteinID:
XP_027452838
UniProt:
A0A6J2DET2
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All DBs
Position
15:72767559..72806289
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AA seq
350 aa
AA seq
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MAAAEAAVVSSSSLETDTALVPETAGTAAATAATSPATAAAAAVAAAARTGSEARVSKAA
LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQE
DIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQP
PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDRWTIDDI
AQSLEHCSSLLPAELALKKSKPEESNEQVLSCEYITLSETKGEDDVIKSS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcggtggtatcgtcgtcatctttggaaacagacacagccctg
gtccctgaaactgcaggaacagccgcagcaacggccgccacctcaccagcgacggctgca
gccgcggccgtcgcggccgctgccagaaccggatccgaagccagggtctccaaggccgct
ttggctactaagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggctgaaggagaagctgttagcagaagctggaatgcct
tctccagaatggaccaaaaggaaaaagcagactttgaaaattggacatggagggacgcta
gacagtgcagcccgaggagttctggtggttggaattggaaggggaacaaaaatgttgacc
agtatgttgtcagggtccaagaggtatattgccattggggaactggggaaagctactgac
acgctagattctactgggaaagtaacagaagaaaaaccttacgataaaataacacaagaa
gatattgaaggcattctacagaaatttactgggaatataatgcaggtacctcccctctat
tctgcattaaagaaagatggacagagactttcaaccttgatgaagagaggtgaagtagta
gaagcaaaacctgccaggcccgttaccgtatacagtctctcccttcaaaaattccagcca
ccatttttcacattagatgttgaatgtggaggaggtttttatataagaagcttggtcagt
gacattggcaaagaactctcttcctgtgccaatgtcctagaactgacccgaaccaaacag
ggaccatttacactagaagagcatgccctgcctgaagacagatggacgattgatgacatt
gcacagtctctggaacattgctcatctcttctcccagcagagttggcacttaaaaaatcc
aaacctgaggagtctaatgaacaagttttgagctgtgaatatataactctaagtgagaca
aagggagaagatgatgtaattaagtcatcttaa
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integrated database retrieval system
