Zalophus californianus (California sea lion): 113923974
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Entry
113923974 CDS
T07874
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113923974 (CHD7)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113923974 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
113923974
NCBI-ProteinID:
XP_027453070
UniProt:
A0A6J2D9L1
LinkDB
All DBs
Position
4:121180745..121365589
Genome browser
AA seq
2998 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPSTN
QNQTKLTHFDHYNQYEQQKMHLMDQPNRMMSSAPGNGLASPHSQYHAPPVPQVPHGGSGG
TQMGVYPGLQNERHGQSFVDSGSMWGPRAVQVPDQIRAPYQQQPQPQPPQPAPSGPPTQG
HPQHMQQMGSYMARGDFSMQQHGQPQQRMSQFSQGQEGLNQASPFIATSGPGHLSHVPPQ
SPSMAPSLRHSVQQFHHHPTTGLHGESVAHSPRFSPNPPQQGAVRPQTLTFSSRSQTVPS
PTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSNSGQGL
MHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGMP
MEVGSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQPSRPFMGMSSAPRELAGHMRPNGCP
GVGLADPQAIQERLLPGQQHPGQQPSFQQLPTCPPMQPHPGLHHQSSPPHPHHQPWAQLH
PSPQNTPQKVPVPQHSPSEPFLEKPVPDMTQVSGPNAQLVKSDEYLPSGDQQPQQKKKKK
KNNHIVAEDPSKSFGKDDFPGGVDNQELNRNSLDGSQEEKKKKKRPKVKKDPKEPKEPKE
KKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSEASALKKKVNKGKTEG
SENSDLDKTPPPSPPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADTAGRD
SPSNTSQSEQQESVDAEGPVVEKIMSSRSVKKQKDSGEEVEVEEFYVKYKNFSYLHCQWA
SVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDFARSTDERGEPV
THYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPETERVERPPADDWKKSESSRE
YKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLV
IAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAII
TTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTV
EELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPK
EETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA
EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDI
LEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTC
IIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS
MSGRESATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIE
SEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQ
TRLYSAVKEDELMEFSDLESDSEEKPCPKPRRPQDRSQGYARSECFRVEKNLLVYGWGRW
TDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRALVN
HSGLSAPVPRGRKGKKVKAQSTHPVVQDADWLAGCNPDALFQEDSYKKHLKHHCNKVLLR
VRMLYYLRQEVIGDQADKILEGADSSEADVWIPEPFHAEVPTDWWDKEADKSLLIGVFKH
GYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTR
TPFKDEIDEFANSPPEDKEESMEIHTTGKPSESATELGQLYWPNTSTLTTRLRRLITAYQ
RSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTF
GVIFDPMKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPDDEPPDLSS
MIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGRHDRDLL
VGAAKHGVSRTDYHILNDPELSFLDAHKNFAQNRGAGNMPSLTPLAIGFGQTPAVLPSAH
VQEDKATGQSEGRAEESGSAAAQEKAEGKEEEEETDGGEKDSKQGCEAESSSVKSELKGM
EVSADTGPKSISEKGSEEDEEEKLEDDDKSEESSQPEVGTVSRGKNFDEESNASMSTARD
ETRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFD
FQGLIPGYTPPTMDSPLQKRSFAELSMVGQASISGSEDLTTSPQLSKEDALNLSVPRQRR
RRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREAASSTSNFSSL
TSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPMKRRRGRRKNVEG
LDLLFMSHKRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGQLDPDTRIPVINLEDGTRLV
GEDAPKNKDLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTL
TGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTEIVKQSGFVPESMFD
RLLTGPVVRGEGASRRGRRPKSEIARAAAAAAAAAASTSGINPLLVNSLFAGMDLTSLQN
LQNLQSLQLAGLMGFPPGLATAAAAGSDAKNPAAVLPLMLPGMAGLPNVFGLGGLLNSPL
SAAAAGNASTASGPGEPEDGASKAEDKGNENEDENKDSEKSTDAVSAADSANGSVGAATA
PAGLPSNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGAGEEKAP
DKAEGAAFQEEEHLEGSDAEENLDKTAESSIFEDEIAQGEELDSLDGGDELENNENDE
NT seq
8997 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctttttggcgaggatgggaatattttcagtgaaggc
cttgaaggccttggagaatgtggttaccctgaaaatccggtgaaccccatgggtcagcaa
atgccgatagaccaaggctttgcctccttgcagccatcccttcatcatccctccactaat
caaaatcaaacaaagctgacccatttcgaccactataatcagtacgaacaacaaaagatg
catctgatggatcagccaaacaggatgatgagcagcgcccctgggaacgggctcgcgtct
cctcactcgcagtatcacgcccctcctgtccctcaggtcccccatggtggcagtggcggc
actcagatgggcgtctaccctggcctgcagaacgaaaggcacgggcagtctttcgtggac
agcggctccatgtggggcccccgggctgtgcaggtgccggaccagatacgggccccctac
cagcagcagccccagccccagccaccccagcctgctccatcggggccccccacgcagggc
caccctcagcacatgcagcagatgggcagttacatggcacgtggggatttttccatgcag
cagcatggtcagccacagcagaggatgagccagttttcccaaggccaggagggcctcaat
caggccagtcctttcattgccacgtcaggccccggccacttgtcccacgtgcccccgcag
agtcccagcatggcgccttccttgcgtcattcggtgcagcagttccaccaccaccccact
actggtctccacggagaatccgttgcccacagtcccagattctcccctaatcctcctcag
caaggggctgtgaggccacagacccttacctttagttctcggagccagaccgtcccctca
cctactataaacaactcagggcagtattctcgatatccttacagtaacctaaatcaggga
ttagttaacaatacagggatgaatcaaaatttaggccttacaaataatactccaatgaat
cagtccgtaccaagataccccaatgctgtaggattcccatcgaacagtggtcaaggacta
atgcaccagcagcccatccaccccagcggctcacttaaccaaatgaacacacaaactatg
catccttcacagcctcagggaacttacgcctctccacctcccatgtcacccatgaaagcg
atgagtaatccggcaggcacccctcctccgcaggtcaggcccggaagtgctgggatgcca
atggaagttggcagttatccaaatatgccccaccctcagccgtctcaccagccccctggt
gccatgggaatcggacagaggaacatgggcccccgaaacatgcagccgtctcgtccgttc
atgggcatgtcctcagcaccgagggagttggccgggcacatgagaccaaatggttgtcct
ggtgttggccttgcagatccccaagccatccaggaacgactgctgcctggccaacagcat
cctggtcagcagccgtctttccagcagttgccaacctgccctccgatgcagccccacccg
ggcttgcaccaccagtcgtcacccccacacccgcatcaccagccttgggcacagctccac
ccatcaccccagaacaccccgcagaaagtgcctgtgcctcagcattctccatcggagccc
tttctagagaaaccagtgccggatatgactcaggttagcgggccgaacgcccagctagtg
aagagtgatgagtacctgccgtccggagatcagcagccacagcagaagaagaagaagaag
aaaaacaaccacattgttgcagaggatcccagtaaaagttttggtaaagatgacttccct
ggtggggttgataaccaagaactaaataggaactcactagatgggtcccaagaagagaaa
aagaaaaagaaaaggccgaaggtaaaaaaagatccgaaggaaccgaaagaacccaaggag
aaaaaagagcccaaggaacccaagaccccgaaagcccctaagattcccaaagagccaaag
gaaaagaaagcaaaaactgccacgccaaaacccaaatccagcaaaaagtcaagtaataag
aaacctgattcagaagcaagtgctttgaagaaaaaggtcaacaagggaaaaacagaaggt
tctgaaaattcagacttagacaaaacgcccccaccatctcctcctcctgaagaagatgag
gaccccggtgttcagaagagacgctccagtaggcaggtgaagagaaagcgatacacggaa
gacttggagttcaaaatttctgatgaggaggcagatgatgcagacactgctgggagagac
tccccctccaacacctcgcagtcggagcagcaggaatctgttgatgcagaaggtccagtg
gtagaaaaaatcatgagcagtcgttcagtaaaaaaacagaaggactctggagaggaggta
gaagttgaggaattctatgtgaaatacaaaaacttctcttatcttcattgtcaatgggca
tctgtagaagatctggaaaaagataagagaattcagcaaaagatcaaacgatttaaggca
aagcagggccagaacaaattcctttcagagattgaagatgagctttttaatccagattat
gtggaggttgaccggataatggactttgcacgtagcacagatgaacggggagagcctgtg
actcactatctggtgaagtggtgctccctgccttacgaagacagcacgtgggagctaagg
caggacatagatcaagcgaagatcgaagagtttgagaaactaatgtccagggagccagaa
acagagcgtgtggagcgacctcctgctgatgattggaagaaatcggagagttccagggag
tacaaaaacaataacaaactcagggaataccagttggagggagtaaactggctacttttc
aattggtacaacatgcgaaactgcattttagcagatgaaatgggtttgggaaaaactatc
cagtccattacatttctctatgagatatatttgaaaggaatccatggcccttttttagta
attgccccattgtccacaatccccaactgggaaagggagttccgtacctggacagagttg
aatgtggttgtgtatcatgggagtcaagctagtcgtcggaccattcagttgtatgaaatg
tacttcaaagatccccagggtcgagtgataaaagggtcctataagtttcatgccatcatc
actacatttgagatgattttgacggattgtcctgagctgcggaatattccatggcgctgt
gtagtcattgatgaagcccacaggctgaagaataggaactgcaagctgctggaggggctc
aagatgatggacttggaacacaaagtgctgctgacggggaccccactacagaacactgtg
gaagagctcttcagcttgcttcatttcttggaaccaagtcgcttcccttcagaaaccacc
tttatgcaagaatttggtgatctgaaaactgaagaacaggtgcaaaaactccaggctatt
ctaaagccaatgatgttgcgacgtctcaaggaggatgtggaaaagaacttggcccccaaa
gaagaaactataattgaagttgagctaacaaatattcagaaaaaatattaccgagccatc
cttgagaagaatttcacgtttctctccaaaggtggtggtcaagctaacgtacctaatctt
ttaaacactatgatggaattacggaagtgctgcaatcatccataccttatcaacggtgct
gaagagaaaattttggaagagtttaaagaaacacacaatgcagactctccagattttcag
ctccaggcgatgatccaggctgctggcaagctagtgctgattgacaagctgctgccaaaa
ctgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttggacata
ctggaagactacctcattcaaagacggtacccgtacgagaggatcgacggcagagtgaga
ggaaatctccgccaggcagctatcgacagattctccaaacctgattctgaccggtttgtt
ttcctcctgtgcacaagggcgggaggtttaggcattaatcttactgctgctgatacctgc
atcatcttcgattccgactggaatccccaaaatgatctccaggctcaggctagatgtcat
agaataggacagagcaaatctgtgaagatctacaggctgattacaagaaattcttatgag
agggaaatgttcgacaaggcgagtttgaagctcggcctggataaagctgtgctgcagtcc
atgagtgggagagaaagcgctaccaatggggtacaacagctttccaagaaagaaatagaa
gatctgctacgaaaaggggcctatggtgcactcatggatgaggaggatgaagggtctaag
ttctgcgaagaagatattgatcagattctcctgcggcgaacccacactatcaccattgag
tctgaagggaaaggttccacatttgctaaggccagttttgttgcatctggaaataggaca
gatatttccttggatgatccaaatttctggcaaaagtgggctaagaaggctgaattggat
attgatgccttaaatgggaggaacaacctggttattgacactccgagagtgaggaagcaa
accaggctgtacagtgcagtgaaagaagacgagctgatggaattttcagacttggagagt
gattctgaagagaagccgtgcccgaagccgcgccggccccaggacaggtcacagggctat
gctcggagtgagtgctttagagttgagaagaatctgctcgtctatggctggggacggtgg
acagatatcctttcccacggacgctacaagcgtcagctcaccgagcaagacgtagaaacc
atctgtagaaccatcctcgtgtactgtctcaatcattacaagggggatgagaatatcaaa
agcttcatctgggatttgatcacgcccacggcggacggccagacgcgagccttggtcaat
cactctggtttatctgccccagtgccacggggaaggaaaggaaagaaggtgaaagcccag
agcacacatccggtggtgcaggatgccgactggctggcgggttgcaacccggacgccctg
ttccaggaggacagctacaagaagcacctgaagcaccactgtaacaaggtcctgctgcgt
gtccgcatgctgtactacctgagacaagaagttataggagaccaggcagataagatttta
gagggtgctgactcaagtgaagctgatgtgtggatccctgaacccttccatgctgaagtc
cccacagactggtgggacaaggaggcagataagtccctcctaattggagtgttcaaacac
ggctacgagaagtacaattccatgcgagctgaccccgcactgtgcttcctggaacgagtt
ggtatgcccgatgccaaggccatcgctgccgagcagagaggaacagacatgctagcagat
ggcggtgacgggggagaatttgatagagaagacgaagacccagaatataaaccaaccagg
acgccattcaaggatgagatagatgaatttgcaaattctcctccagaagataaagaggaa
tccatggaaatacataccacaggcaagcccagtgagagtgctactgagttaggccaactc
tactggcccaacacctcaaccctgactacccgtctgcgccggctcattactgcctatcag
cgcagctataaaaggcaacaaatgaggcaagaggctctcatgaagactgaccggcggagg
cgacggccccgggaggaagtgagagcactagaagcagaaagggaagctataatatccgag
aaacggcaaaagtggacaagaagagaagaggctgatttttaccgtgtggtatctactttt
ggagttatttttgaccccatgaaacagcagtttgactggaaccagtttcgagcctttgcc
agacttgacaaaaagtctgatgagagtttggagaaatacttcagttgttttgtggccatg
tgtaggcgagtgtgtcgaatgcccgctaagccagatgatgaaccacctgacctctcctcc
atgatcgagccaatcacagaagagcgtgcctctagaactctctaccgcatcgagctgctg
cggaaaatacgcgagcaggttcttcatcaccctcagctgggagagaggctgaagctctgc
cagccgagtttggatctgccggagtggtgggaatgtgggaggcatgaccgggacttgctg
gttggtgctgctaaacacggggtcagtcggacggattatcacatcctcaacgaccccgag
ttatctttcttggatgcacacaaaaactttgctcagaacagaggggcagggaacatgccc
tccctgaccccactggccattggatttggccagactcctgccgtcctcccgtctgctcac
gttcaggaagacaaggcgacaggacaaagtgaaggcagggcggaagagtctggaagtgcg
gctgcccaagagaaagctgaggggaaggaagaggaggaagagaccgatggcggggagaag
gacagtaagcagggatgtgaggccgagtccagctctgtaaaaagtgaactgaaagggatg
gaggtcagtgcagatacagggcccaagtctatttcagaaaaaggttctgaagaggacgag
gaagaaaagctggaggatgatgataagtcagaggaatcttcccagcctgaagtaggaact
gtctctagagggaagaattttgatgaggaaagcaatgcttccatgagcaccgctagggat
gaaacccgagatgggttctacatggaggatggagacccttcagtagctcagctccttcat
gaaagaacatttgccttctcattttggcctaaggaccgagtaatgataaaccgattagac
aacatctgtgaagcagtgctgaagggcaaatggccggtaaacaggcgccagatgtttgat
ttccagggcctcatccctggttacacgccacccaccatggatagccccctgcagaagagg
agctttgccgagctctccatggtcggccaagctagcatcagtgggagcgaggacctcacg
acctctcctcagttgtcaaaggaagacgccctcaacctctctgtccctcgccagcggagg
aggaggaggagaaaaattgaaatcgaggccgaaagagctgccaagcggcggaacctcatg
gaaatggttgcccagctgcgggagtctcaggtggtctcagaaaatggacaagaaaaagtt
gtagacttatcaaaggcctcgagagaggcagcaagctctacctcaaatttttcatctctt
acttcaaagtttatcttgcctaatgtctcgacaccggtgtccgatgcctttaagactcaa
atggagctgctccaggcaggcctgtcacgcacacccacgaggcatctgcttaatggctcc
ctggtggatggagagcctcccatgaagaggaggcggggaaggaggaaaaacgtggagggt
ctcgatctgcttttcatgagccacaaacggacgtcattgagtgcagaggatgctgaggtg
accaaagcttttgaagaagatatagagaccccacccacaagaaacattccttctcctgga
cagctggacccagacacgcggatccctgtgataaatcttgaagacgggactaggctggtg
ggggaggacgctcctaaaaataaggatttagttgaatggctgaagctgcatcctacttac
actgttgatatgccaagttatgtaccaaagaatgcggatgtgctgttttcctcatttcag
aaaccgaaacagaaacgacatagatgtcgaaaccctaacaaattggatataaacactttg
acgggagaagaaagggtgcctgttgtcaataaacgaaatggaaagaagatgggtggagct
atggcgcctccaatgaaggacctgcccaggtggctggaagagaaccctgaatttgcagtt
gctccggactggactgagatagtgaagcagtctggttttgttcctgagtccatgtttgac
cgccttctcaccggccctgtggtgcggggagaaggagcgagcaggcgaggacgaaggccc
aagagtgagatcgcccgggcagcggcggcggcggccgcggcggcggcctccacgtcaggc
atcaaccctctgttggtgaacagcctgtttgctggaatggacctcacgagccttcagaac
ctccagaacctgcagtctctgcagctggcggggctcatgggcttccctccgggactggcc
acggcggccgccgccggaagcgacgctaagaaccccgcggccgtgctgccgctgatgctg
ccgggcatggcgggcctgcccaacgtgttcggcctgggcgggctgctcaacagccccctc
tcggccgccgctgctggcaacgcctcgacggcttcgggcccaggagagccggaagacggc
gcttccaaagccgaggacaaaggcaacgagaacgaggacgagaacaaagactctgagaaa
agcacagatgctgtttcggctgctgactctgcgaatggatctgttggtgctgctactgcc
ccggccggattgccctccaacccgctcgccttcaaccccttcctcctgtccaccatggcg
ccaggcctcttctacccatccatgtttctacctccgggactggggggattgacactgcct
gggttccccgcgttagcaggactccagaacgccgtgggcgccggcgaagaaaaggccccc
gacaaggccgagggggccgccttccaggaagaggagcacctggaaggcagtgacgccgag
gagaacctggacaagactgcggagtcctccatcttcgaagacgaaatagcacagggtgaa
gagctggactcacttgacgggggggacgaactagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
