Zalophus californianus (California sea lion): 113924169
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Entry
113924169 CDS
T07874
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113924169 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zca04990
]
113924169 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
zca04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
113924169 (PDLIM5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
113924169
NCBI-ProteinID:
XP_027453318
UniProt:
A0A6J2DG92
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Position
2:77256970..77462677
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AA seq
742 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQANVRIGDVVLSIDGISAHG
MTHLEAQNKIKGCTGSLNMTLQRASSTPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
TNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHANTSSHASPPPVAAVTPPSFAASGPH
ANASLSADQHSSALSAGKSAVNVPRQPTVTSLCSETAQELAEGQRRGSQGDIKQQNGNPG
TVKTPPKRPPRKHIVERNTEFYHIPTHSDASKKRLMEDTEDWRPRTGTTQSRSFRILAQI
TGTEHLKESDTENTKKAKFDSSLEDLPQSGPHPPATPQVLHIGSQVATLSKVTTYSSSTR
NVVTSSLEGFRNSSTFSPPARYSAAVLSSAAATVSAVLAANPARATFTGLSSPDKYHSLL
DALCISPVSKPLAFSYLQSSRKSSGSIHVKKISNTQDTSQQLAPSVASARSMPERQESPA
STRPGVTGLTTAAAFKPPGSTNIVKSPSWPQPNQAALSTGRISNSGTSSGAAAPASSARG
QPQPGDQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMA
YIGFVEEKGALYCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRN
NVFHLEDGEPYCETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLE
GQTFFSKKDKPLCKKHAHSVNF
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagtgtatccttggttggcccagctccttggggtttccggctgcaaggt
ggcaaggatttcaacatgcctctgacaatctctagtctcaaagatggtggcaaagcatcc
caggcaaatgtaagaataggtgatgtggttctcagcattgacggaataagtgcacatgga
atgactcatcttgaagcccagaacaaaattaagggctgtacaggctctttgaatatgact
ctgcaaagggcatcttctacacccaagcctgagccagttcccgtgcagaagggagaacct
aaagaagtagttaaacctgtgcccattacatctcctgctgtgtccaaagtcacttccaca
accaacatggcctacaataaggcaccacgaccctttggttctgtgtcttcaccaaaagtc
acatccatcccatcaccatcgtccgccttcaccccagcccatgcgaacacttcatcacat
gcttcccctccacccgtggccgctgtcactcctccctcatttgctgcatctggaccgcat
gctaatgccagtcttagtgctgaccagcattcgtctgcactgagcgctggtaaatctgca
gttaatgtcccacggcagcccacagtcaccagcctgtgttccgagactgctcaggagcta
gcagaggggcagagaagaggatcccagggggacattaaacagcaaaatggtaaccctggc
accgtgaaaaccccacctaaacgcccaccaagaaaacacattgtggagcgcaatacggag
ttttatcacataccaactcatagtgatgccagcaagaagagactgatggaggacaccgaa
gactggcgtccaaggactggaacgactcagtctcgttctttccgaatcctcgcccagatc
actgggactgaacatctgaaagagtcggacactgaaaatacaaagaaggcaaagtttgac
agttctctggaagacctacctcagagtggacctcacccacctgcaactcctcaggtttta
catattggtagccaagtagccacactttctaaagtaaccacgtattctagctccacaaga
aatgtggtgacaagttctttggaaggctttcgaaactcttctaccttctcacctcctgct
agatacagtgctgcagttcttagtagtgcggctgctaccgtgtctgctgttcttgctgca
aacccagccagagctacatttacagggctctccagccctgataaatatcactccctcctg
gatgcactttgcatcagccctgtttccaagccgttagctttttcgtacctgcagtcctcg
aggaagtcatctggctcgatccatgttaagaaaataagcaacacccaggacacttctcag
cagttggctccatcagtagcttcagcacggagcatgcctgagaggcaggagagcccagcc
tccaccagaccaggggtgactggtctcacaactgctgccgccttcaagcctccaggatcc
accaacattgtcaagtcaccaagttggccacagccaaaccaagcagcgctttccactgga
agaatctcaaacagtggaacttcgtcaggagcggcagcaccagccagctcagccagggga
cagccccagccaggtgaccaagacactttagtacaaagagctgagcacattccagcaggg
aaaagaactccaatgtgtgcccactgtaaccaggtcatcaggggaccattcctagtggca
ctagggaaatcttggcatccagaagaatttaactgtgctcactgcaaaaatacaatggcc
tacattggatttgtagaggagaagggagccctgtactgtgagctgtgctatgagaaattc
tttgctcctgaatgtgggcgatgccaaaggaagatccttggagaagtcatcaatgctctg
aaacaaacttggcacgtttcctgttttgtgtgtgtggcctgtggaaaacccattcgtaat
aatgtttttcatttggaggatggtgaaccctactgtgagactgattattatgcccttttt
ggtaccatatgccatggatgtgagtttcccatagaagctggcgacatgttcctggaggcc
ctgggctatacctggcacgacacttgctttgtatgctcggtatgttgtgaaagtttggaa
ggtcagacctttttctccaagaaggacaagccactttgcaagaaacatgctcattctgtg
aatttttga
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