Zalophus californianus (California sea lion): 113924696
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Entry
113924696 CDS
T07874
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03040
Spliceosome
zca05202
Transcriptional misregulation in cancer
zca05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113924696
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
113924696
05205 Proteoglycans in cancer
113924696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zca03041
]
113924696
03009 Ribosome biogenesis [BR:
zca03009
]
113924696
Enzymes [BR:
zca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113924696
Spliceosome [BR:
zca03041
]
Complex A
U1 snRNP components
U1 related factors
113924696
Complex B
113924696
Ribosome biogenesis [BR:
zca03009
]
Eukaryotic type
Pre-60S particles
Helicases
113924696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
BNIP2
Motif
Other DBs
NCBI-GeneID:
113924696
NCBI-ProteinID:
XP_035582039
UniProt:
A0A6P9F7Q2
LinkDB
All DBs
Position
2:complement(194347662..194349963)
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AA seq
614 aa
AA seq
DB search
MSGYSSDRDRSRDRGFGAPRCGGSRAGPLSGKTFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVETYRRSKEITVSGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPIALSGLDTVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIHGGAPKGPQIRDLERGVEICIATPGRLIDFLGCGKTNLR
RTTYLVPDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NTGALELSANHNILQIMDVCYDVEKDEKLTRLVEEMMSEKENKTIVFVETKRRCDELTRK
MRRAGWPAMGIQGDKSQQEHDWVLNEFKHGKAPILIATDVASRGLEVEDVKFVVNYDYPN
SSEDYVHRIGRTARSTKTGTAYTFFTPNNTKQVSDLISVLREANQAVDPKLLQLVEDRGS
GRSRGRGGMKDDCRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVPNMYNGMNQQAYAYPATAA
APMIGYPMPTGHSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttattcgagcgaccgagaccgcagccgggatcgagggtttggtgcacctcga
tgtgggggaagtagggcagggcccctatctggaaagacgtttggaaaccctggggagaaa
ctagtcaaaaagaagtggaatcttgatgagctgcccaaatttgagaagaatttttatcaa
gaacaccctgatttggctaggcgcacagcccaagaggtggagacatacagaaggagtaag
gaaattacggttagcggtcacaactgcccaaagccagttctgaatttttatgaagcaaac
ttccctgcaaatgtcatggatgtgattgcaagacagaattttactgaacccactgctatt
caagctcagggatggcccattgctctaagtggattggacacggttggaatagcacagact
ggatccgggaaaacattgtcttatttgctgcctgctatcgtccacatcaatcatcagcca
ttcctagagagaggtgatgggcctatttgcttggtgctggcaccaactcgggaactggcc
caacaggtacagcaagtagctgctgaatactgtagagcatgtcgattgaagtccacttgc
atccatggtggtgctcctaagggaccacagattcgtgatttggagagaggtgtggaaatc
tgtattgcaacacccggaagactgattgactttttggggtgtgggaaaaccaatctgaga
agaactacttaccttgtccctgatgaagcagatagaatgcttgatatgggctttgaaccc
caaataaggaagattgtggatcagataagacctgataggcaaaccctaatgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactacatacatata
aacactggtgcactagaactgagtgcaaaccacaacattcttcagatcatggatgtatgt
tatgatgtagaaaaggatgaaaaacttactcgtctagtggaagagatgatgagtgagaag
gagaataaaaccattgtttttgtcgaaaccaaaagaagatgtgatgagcttactagaaaa
atgaggagagccgggtggcctgccatgggtatccagggcgacaagagtcaacaggagcat
gactgggttctaaatgaattcaaacatggaaaagctcctattctgatcgctacagatgtg
gcctccagagggctagaggtggaagatgtgaaatttgtcgtcaattatgactaccctaac
tcctcagaggattatgttcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacacaaagcaagtgagcgaccttatctctgtgctt
cgtgaagctaatcaagcagttgatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgactgccgggacagatactctgcgggc
aaaaggggtggatttaatacctttagagacagggaaaattatgacagaggttactctagt
ctgcttaaaagagattttggggcaaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttggaagtaattttgtgtctgccggtatacagaccagttttaggact
ggtaatccaacagggacttaccagaatggttatgatagcactcagcaatatggaagtaac
gttccaaatatgtacaatggtatgaaccaacaggcatatgcatatcctgctactgcagct
gcgcctatgattggttatccaatgccaacaggacattctcagtaa
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