KEGG   Zalophus californianus (California sea lion): 113924767
Entry
113924767         CDS       T07874                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
zca  Zalophus californianus (California sea lion)
Pathway
zca03018  RNA degradation
zca03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113924767
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113924767
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zca03019]
    113924767
   03041 Spliceosome [BR:zca03041]
    113924767
Messenger RNA biogenesis [BR:zca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113924767
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     113924767
Spliceosome [BR:zca03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    113924767
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 113924767
NCBI-ProteinID: XP_035581878
UniProt: A0A6P9FI01
LinkDB
Position
2:complement(2040910..2041876)
AA seq 139 aa
MLPLSLLKTVQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcttcccctgtcactgctgaagacggttcagaatcatcccatgttggtggaactcaaa
aatggggagacatacaatgggcacctggtgagctgtgataactggatgaacattaacctt
cgagaggtgatctgtacatccagggatggggacaagttttggcggatgcccgagtgctac
atccgtggcagcaccatcaagtacctgcgtatccccgatgagatcatcgacatggtcaag
gaggaggtggtggctaagggccgtggccgcggcggcctgcagcagcagaagcagcagaag
ggccgaggcatggggggtgccgggcgaggtgtgtttggtggccggggccgaggtgggatc
ccaggcacaggcagaggtcagccggaaaagaagccgggccgacaggcgggcaaacagtga

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