Zalophus californianus (California sea lion): 113924832
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Entry
113924832 CDS
T07874
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03013
Nucleocytoplasmic transport
zca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113924832
03015 mRNA surveillance pathway
113924832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113924832
03041 Spliceosome [BR:
zca03041
]
113924832
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113924832
Spliceosome [BR:
zca03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
113924832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
113924832
NCBI-ProteinID:
XP_035582074
UniProt:
A0A6P9F7T1
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Position
2:164506508..164509470
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AA seq
918 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPHSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRRPRRCKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSLSPAPEKKEKXPDLPEPSMKVKEPSVQEATS
TSDILKVPKPEPVPEPEEPSPEKNSKKEKEKEKTRPRSRSCTKSRSRTRSHSPSHTRPRR
RHRSXSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRVRSSASLSGSS
SSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQ
SNCTRKSHVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKIAAADSV
QQRHQYRXQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRHRRHSPFRSASPSPPKCQKE
TSLWIQMRKRWESPVTKSGRRRRSPSPPSTRRRRSPSPAPPPRRRRSPTPPPRLRTPSPP
PCRCSPSPRRYSPPIQRRYSPPPPKRRTASPPPPPKRRASPSPPPKRQVSHSPPSKQRSS
PVTKRHSPSLSSKHRKGSSPSRSTQEPQXPQPNKRHSPSPRPRAPQTSSSPPPVRRGASL
SPQRRQSPSPSTRPIRRVSRTREPKKSKKAASLSPQSIRRVSSSRSVSGSPEPAAKKPPA
PQSPVQSQSPSTNWSPAVLVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHK
KHKKHKKEKAVAAAAAAAVTPAAPAAPTTTSAQEEPETEPEPKKETESEPEDNLDDLEKH
LREKALRSMRKAQVSPQS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggatatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
cactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgctcttaagtgcacaagaaaacatcgctggaatccct
tccgcttttctagaactgaagaaagaagaaataaaacagagacaaattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggaaaggtctcgaaggccaagaagatgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtctttcccctgctccggaaaagaaggaaaaanct
ccagacctcccagaaccatcaatgaaagtaaaagaaccttcagtacaagaggccacttct
actagtgacatcctgaaggttcccaaacctgaacctgtaccagagcctgaagaaccttct
ccagagaaaaattccaaaaaagaaaaagagaaggagaagacccgaccaagatctcggtca
tgtaccaaatcaagatcccggacacggtctcactctccttctcatactcgacctagacgg
cgtcatagatcctgatcaagatcatactcacctagaaggaggccaagtccgagaaggcgg
ccatctcctcgaagaagaaccccaccaagacgaatgccgcctccacccaggcatagaagg
agtagatctccagtgagacgaagaagggttcgttcatcagcatccttgtctggaagtagc
tcatcatcctcttcgtcccgttcccggtcaccgccaaagaagcctcctaagaggacatcc
agcccccctcgaaaaactcgtaggttatctccttcagcaagtcctcccaggcgaaggcat
aggccatcgcctccagcaactccaccgccaaaaactcgtcattccccaacaccccagcag
tcaaactgtacgagaaaaagtcatgtttctgtctctccagggagaacttcaggtaaagtg
acaaaacataaaggtactgagaaaagagagtccccttcaccagcacctaagcctagaaaa
gtagagttatctgaatcggaagaagataaaggtggcaaaatagctgcggcagattctgtg
cagcagagacatcagtacagatgacagaaccagcagtcctcatctgattctggctcctct
tcttcctcagaagatgagcgacccaagaggtcccatgtgaagaatggtgaggtaggcagg
catcggagacattcccctttccggagtgcctctccatcacctccaaagtgccagaaagag
acttccctttggatacaaatgcggaagcgatgggaatcgccagtgactaaaagtggtaga
cggaggaggagtccctccccaccatctaccagaaggcgacgttctccttctcctgcccct
cctcctcgcaggcgcaggtcccccactccgccaccacgactaaggactccttctcctccc
ccctgccggtgctcaccttccccaagaagatattctcctccaatacagaggagatactct
cctccacctccaaagagaagaacggcttctccccctccccctcctaaacgaagggcctca
ccatctccaccaccaaagcgtcaggtctcccattctccaccttccaaacaaagaagctcc
ccagtcaccaaaagacattcgccttcattatcatcaaagcataggaaagggtcttcccct
agccggtctacccaggagccccagtaaccacaaccaaacaaaaggcattctccctcacca
cggcctcgagctcctcaaacctcctcaagtcctccacctgttcgaagaggagcatcatta
tcaccccaaagaaggcagtccccttctccaagtactaggcccattaggagagtctccagg
actcgggaacccaaaaagtcaaaaaaggctgcctcactaagccctcagtctataaggagg
gtctcgtcctcccgatctgtctcaggatctcctgagccagcagctaaaaaacccccagca
cctcaatctcctgtccagtcccagtccccctctaccaactggtcaccagccgtactggtc
aaaaaggctaaaagcccaaccccaagtccatctccagcgaggaactcagacccagaagga
ggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaag
aagcacaaaaaacacaagaaggaaaaggccgtggcggcagccgccgcagcagccgtcacc
cctgcggcccccgctgcccccacgaccacatcggcacaggaggaaccggaaacagagccc
gagcctaagaaggagaccgaaagcgagcccgaagacaacctcgacgacttagaaaagcac
ctgcgcgaaaaggcgctgaggtcgatgcggaaagctcaagtgtccccacagtcttag
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