Zalophus californianus (California sea lion): 113925323
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Entry
113925323 CDS
T07874
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113925323 (SH3TC1)
Membrane trafficking [BR:
zca04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
113925323 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
SH3_1
SH3_2
ARM_TT21
SH3_9
TPR_2
DUF982
TPR_1
Motif
Other DBs
NCBI-GeneID:
113925323
NCBI-ProteinID:
XP_027455790
UniProt:
A0A6J2DH39
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All DBs
Position
2:complement(3240643..3285663)
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AA seq
1372 aa
AA seq
DB search
MEGPAEEPAPKGRGPAVAPSGGGGGGGHKAQRVAMSPSVVWERAGSEEAEALVGGDASLP
PGGSGPAAGTPPGQMGTYPTDLTLQLLAVRRKTGLPDPSLQQTVRSRLRLLENDSQEVAR
ALGELSARLLSIHSDQDRIVVTFKTFEEIWKFSTYHALGFTHHCLENLLVDQAFWLLSPN
EDEETAVQVHVDQEALRLTHESLLAQEGPVFVLCPDHHVRVKTSPRGAGSGPWARRRASG
VPQGEAPSAVDSSAPSPGTFSEEVAAAATPETLIPFHQWALRVPWDPIDDSVNGPVTSDI
PLMATGLATAVADYQGSGPEEMTFRGGDVIEVLGAQVPGLPWCLGRHTASGQVGFVRTSL
VSVQGQVSELENVIFLSEEERSFFSNEGRFSEEDARQLLGRASGTDVCTVYSLDRLEEAE
FGQLEEQEVPQPCLHPEPRETLQKVKNVLEQCKSSQGCPEEPVSWGLCTMSSGASSRDSE
EPSFSLDAGADWAHPEALGSLLLFLDAPGYKACFRGLYDLSLPGLSTLFCGFSNEKELAG
HLAQARGAAKKAGFPMALARLCFLLGRLCVRRLKLSQARVYFEEALGALGGLFGDLFLVV
AVYANLATVHLKQKNRDKCAQVVPKALALLLGTPSHICSTEAESELLRHALRRAILCRSP
QAEARACFLLAKHHARIKQPEEALPFLERMLLLHGALGSPEASWPADGYLLLADIYSRQC
LPHLVLSCVRVASLRARGSPGSSLRSADLVLRNSPRLHRPPSQTAHYLRQALASVASGPL
RGPLCASLAQLHSRHGQQARAISFMMQAMEAAAGTSGRLAVDYVVALAWLYVLCGQSAVA
LDILESVLDMAVASVDQEGVIANMAAVALRRTSRTRQAAEGYYRALRVARTRGQLRNQAV
VLANFGALCLQAGAGGLAQHYHLEAVKLFSRLPGRECGQDFTWVLLRLGRLYTHRALARQ
GKCYYEWAFLVAVETDHVEGQLRAVQRLCHFYSRVMPSEAQCVVYHEFQLSLARRVADKV
LEGQLLETISQLYLSLGTERAYKSALDYTKRSLGIFIDLQKKEKEAHAWLQAGKIYYILQ
QNELVDLYIQQVLNKHADDVFTQLTHRRTCFGSIWPVSLKNAFITGAPFPVAQNAALYTG
DPNLGLELFEAAGDIFFNGTWEREKAVSFYRDQALPLAVTTGNQEVELRLCNKLVALLAE
LESPHEGLEFAHVALALSITRGDRLNERVAYHRLAALHQRLGHGELAEHFYLKALSLCSS
PLQFDEETLYYVKVYLVLGDIIFYDLKDPFDAAGYYQLALAAAVDLGNKKAQMKIYTRLA
TIYHNFLLDREKSLFFYQKARTFATELNIRRVNLAPERCWGRAPWLAPSALP
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggagggccccgcggaggagccggccccgaaggggagagggcccgcggtggcgccctcg
ggaggcggcggtggtggcggccacaaggcccagagagtggccatgagcccatcggtcgtc
tgggagcgagcagggtccgaggaggccgaggcgctggtcggaggtgatgccagtcttccc
cctgggggctccgggccggctgctgggacccctcctggccagatgggcacgtaccccaca
gacctgaccttgcagctgctggccgtgcggaggaagacggggctgccagaccccagcctg
cagcagaccgtgaggagccggctccgcctgttggaaaatgacagccaggaggtggcccgt
gcgctgggggagctgtcggccaggctgctgtctatccacagtgaccaggatcggattgtg
gtgacctttaagactttcgaggaaatctggaagttctccacctaccatgctcttggcttc
actcatcactgcctggaaaatctactcgtggaccaggccttctggctgctctcacccaac
gaggacgaggagacagccgtccaagtccacgtggaccaggaggccttgaggctgacgcac
gagagcctcctcgcccaggaaggtcctgtcttcgtcctgtgtcctgaccaccatgtgcga
gtgaagaccagcccccggggtgcagggagcggcccctgggcccgcaggcgagcctcgggg
gttccccagggagaggcaccctcggcagtggactcctccgctcccagccccggcacgttc
tccgaggaggtggcggcggcggccactccagaaactttgattccatttcatcaatgggct
cttagggtcccctgggaccccatcgatgactccgtaaatggacctgtgacatcggacatc
ccactgatggccacgggcctggccacggcggtggcagactaccagggctccgggcctgaa
gagatgaccttccgaggcggcgacgtcatcgaggtcctgggcgcccaggtgcctggcctg
ccctggtgcctgggccggcacacggcctcgggccaggtcgggtttgtgcggacgagtctc
gtcagtgtgcagggccaagtgtctgagctggaaaatgtgatttttctcagtgaggaagaa
aggtcattcttcagcaatgaaggacgcttttcggaggaggacgccaggcagctactgggg
agggcatccggcacagacgtctgcacggtgtacagcttggacagattagaagaagccgag
tttggccagctggaagagcaagaagtgcctcagccttgcctgcacccagagccacgtgag
accctccagaaggtgaagaatgttctagaacaatgcaagtccagccagggctgccccgag
gagccagtgtcctggggtctgtgcacgatgtccagtggtgcaagctcacgggacagcgag
gagccctccttcagcttggatgcgggggccgactgggcccacccggaggccctgggctcg
ctgctgctgttcctggatgcgcctgggtacaaggcctgcttccgtggcctgtatgacctc
tccctgccggggctgagcaccctgttctgtggcttcagcaatgagaaggagctggccggg
cacctggcacaggcccggggggcagccaagaaggccggcttccccatggcgctcgccagg
ctctgcttcctcctggggagactgtgtgtgcgcaggctcaagctgtcccaggcccgcgtg
tacttcgaggaggctctgggggcgctggggggcctctttggcgacctcttcctggtggta
gctgtgtacgccaacctggccaccgttcacctgaagcagaagaacagggacaagtgtgcg
caggtggtgcccaaggccttggccctgctcctggggacgcccagccacatctgcagcacc
gaggccgagtcggagctcctgaggcacgccctgcgccgggccatcctctgccggagcccc
caggccgaggcccgggcctgcttcctgctggccaagcaccacgctcgcatcaagcagccc
gaggaggcgctgcccttcctggagaggatgctgcttctgcacggggccttgggctccccg
gaggcctcgtggcccgcggacggctacctgctcctggcggacatctacagccgccagtgc
ctgccgcacctggtgctcagctgcgtcagggtggcctcgctgcgggcccgtggctcgccg
ggcagctcactccggagcgcggacctggtcctccggaactcaccccggctccaccggccg
ccctcccagacggcgcactacctcaggcaggcgctggcctccgtggcctcgggccccctg
cgcggccccctctgtgccagcctggcccagctgcatagccgccacgggcagcaggccagg
gccatctccttcatgatgcaggccatggaagcggccgcgggcaccagcggccgcctggcc
gtggactacgtggtggcgctggcctggttgtacgtgctttgcggccagagcgcggtggcc
ctggacatcctcgagtccgtcctggacatggcggtggccagtgtggaccaggagggcgtg
atcgccaacatggcagccgtggccctgaggaggacgagcaggacccggcaggcggccgag
ggctactaccgcgccctgcgagtggccaggacccggggccagctgcggaaccaagcggtg
gtcctggccaatttcggggccctgtgcctgcaggccggagcggggggcctggcccagcac
taccacctggaggccgtgaagctcttctcgcggctgcctggcagagagtgcggccaggac
ttcacctgggtgctcctgcggctgggccgcctgtacacccacagggcccttgcccgacag
ggcaagtgctactatgaatgggcctttctggttgctgtggagacggaccacgtggagggc
cagctgcgagccgtccagcggctctgtcacttctatagcagagtcatgcccagcgaggcc
cagtgcgtcgtctaccacgagtttcagctctcgctggcccgcagggtggccgacaaggtg
ctggagggccagctcctggagaccatcagccagctctacctgtcgctgggcaccgagcgg
gcctacaagtccgcgctggactacaccaagcgcagtctggggatcttcatcgacctccag
aagaaggagaaggaggcacatgcctggctgcaggcagggaagatctactacatcctccag
cagaacgaactggtggatctgtacatccagcaagtgctcaataaacatgcagatgatgtg
ttcactcaactgacacacagaagaacttgcttcggcagcatatggcctgtctccttaaaa
aacgcattcatcacaggagctccatttccagtggcacagaatgcggccctgtacacgggg
gaccccaacctggggctggagctgtttgaggcggctggggacatcttcttcaacgggacc
tgggagcgagagaaagcagtgtccttctaccgggatcaggcactgccactggccgtgacc
acagggaaccaggaggtggagctgcggttgtgcaacaagctggtggcgctgctggccgag
ctggagtcgccccacgagggcctggagttcgcccacgtggccctggcgctgagcatcacc
cggggggaccgactgaacgagcgagtggcctaccaccggctggcggccctgcaccagcgg
ctgggccacggtgagctggcggagcacttctacctcaaggctctgtcgctctgcagctcg
cccctgcagttcgatgaggagaccctgtactacgtgaaagtgtatctggtgctcggtgac
atcatcttctacgatctgaaggaccccttcgacgcggccgggtactaccagctggcgctg
gccgcggcggtggacctgggcaacaagaaggcccagatgaagatctacacgcgcctggcc
accatctaccataacttcctcctggaccgtgagaagtccctcttcttctaccagaaagcc
aggacctttgccaccgagctcaacatccgcagggtcaacctggccccagagcggtgctgg
gggcgggcgccctggctggcccccagcgccctgccctga
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