Zalophus californianus (California sea lion): 113925676
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Entry
113925676 CDS
T07874
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03030
DNA replication
zca03410
Base excision repair
zca03420
Nucleotide excision repair
zca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113925676 (RFC1)
03410 Base excision repair
113925676 (RFC1)
03420 Nucleotide excision repair
113925676 (RFC1)
03430 Mismatch repair
113925676 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zca03032
]
113925676 (RFC1)
03400 DNA repair and recombination proteins [BR:
zca03400
]
113925676 (RFC1)
DNA replication proteins [BR:
zca03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113925676 (RFC1)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113925676 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
BRCT_2
Rad17
RuvB_N
AAA_17
AAA_30
AAA_14
AAA_33
AAA_5
AAA_16
AAA_18
AAA_19
nSTAND3
Zeta_toxin
RNA_helicase
AAA_7
SKI
NTPase_1
NPHP3_N
TIP49
Motif
Other DBs
NCBI-GeneID:
113925676
NCBI-ProteinID:
XP_027456017
UniProt:
A0A6J2DMG4
LinkDB
All DBs
Position
2:complement(32431778..32521407)
Genome browser
AA seq
1153 aa
AA seq
DB search
MDIRKFFGVIPSGKKPVSETVKKNEKTKSAEETLKAKKGIKEIKVNSSCKEDDSKQKQPN
KKKRIIYDSDSESEETVQVKNAKKQPEKLPLSSKPGKILRQDPVTYISETDEEDDFMCKK
AASKSKENGGSTNSYLGASNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKK
MVASKRKEPSQNADDSTLNDEVIAKQLQLNEDAELERQLHEDEEFARTLAMLDEEPKTKK
ARKDPGEREAFSSVQAILSKAEKHKSPHKVKTEQFSDDRKNCSPKKQTKCESLIGSQQHL
KSFPHKIGETSPKASSKVALLKKKGESSYKETEPMASKRKGNAVELKGQTKTPKKPKSSP
AKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESI
ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRT
MPGKKSKYEIAVEAEMKKEKSKLERTPQKKDQGKRKISPTKKESESKKSRLTPKKDSFIM
SVKKETSVFWRCLDFEEQVAEETNGDSRARNLADDSSESKVENLLWVDKYKPTSLKTIIG
QQGDQSCANKLLRWLQNWHKSPSEDKKHAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTA
SLVCQELGYSYVELNASDTRSKNSLKEVVAESLNNTSITGFYSTSQHGSGGAAHSVSTKH
ALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRP
RVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKA
DSHRAKKDIRLGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPV
AAGGDMKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQ
FPAFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVQPLTSQGV
EGVQDVIALMDTYYLMKEDFENIMEISSWGGKSSPFSKLDPKVKAAFTRTYNKEAHLTPY
SLQAVKIPRHSTGPALDSEYSEELNEDDSQSDEKDQDSVETDAMIKKKTKSSKPSKSEKD
KESRKGKGKSSKK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacctgtaagtgaaaca
gtaaagaagaatgagaaaacaaagtccgctgaagaaactttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagaagatgactctaaacagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtgcaggtaaaa
aatgccaaaaagcaaccagagaaattgccattgtcttctaaacctggtaaaattctacgc
caggatcctgttacatacatttcagaaacagatgaagaagatgacttcatgtgtaagaag
gcagcctctaaatcaaaagagaatggaggatctacaaatagttatcttggagcatcaaac
atgaaaaagaatgaagaaaacactaagaccaagaataaacctttatcaccaataaaactt
acccccacgtcagtgcttgattattttggaaccggaagtgtccaaagatcagataagaag
atggtagcaagcaaaagaaaagagccttcacaaaatgcagatgattccacattaaatgat
gaagtcatcgccaagcaattgcaacttaatgaggatgcagagctggagagacaactacat
gaagatgaagagtttgccagaacgttagccatgttggatgaagaacccaagaccaaaaag
gctcggaaggacccaggagagagagaagcgttttcatctgtccaagccattttaagtaaa
gcagaaaaacataaatctcctcataaagtaaaaacagaacaattttcagatgacagaaag
aactgcagtcccaagaagcaaactaaatgtgaaagtttgataggatctcagcaacatttg
aagtcattccctcacaaaataggagaaacttctccaaaagccagttccaaggtggccctt
ttgaaaaaaaagggagagagttcttataaagaaacagagcctatggcttcaaaaagaaaa
ggaaatgctgttgaattaaaaggacagacaaaaactcctaagaaacccaaaagttctcca
gctaaaaaagagtctgtaagtcctgaagattctgagaagagacgcactaattatcaagct
tatcgaagctacttaaatagagaaggccccaaagctctgggctccaaagaaataccaaag
ggagctgaaaattgcttggagggccttacatttgtaatcacgggagtgctggagtccatt
gaacgagatgaggccaagtctctaattgagcgttacgggggaaaagtaacaggaaatgtc
agcaagaaaacaaactaccttgtcatgggtcgtgatagtggacagtccaagagtgataag
gcagcagccttggggacaaatattattgatgaagatggcctattgaatctgattcgaact
atgccaggcaagaagtctaagtatgaaatagcagttgaagctgagatgaaaaaagaaaag
tccaaattggaaagaacacctcaaaaaaaagaccaaggaaaaagaaaaattagcccaact
aagaaggagtcagaatctaaaaaaagcagactgactcccaaaaaggacagcttcataatg
tcagtaaaaaaggaaaccagtgtgttttggagatgcctggactttgaagagcaggtggct
gaggagacaaacggtgacagccgggctaggaatttggctgatgacagcagtgaaagcaaa
gtggaaaatttgctctgggtggataaatataagccaacctcgctcaagaccataattgga
cagcagggtgaccagagctgtgccaacaaactcctccgctggctccagaactggcacaag
agtccatccgaagataagaaacacgcgaagtttggtaagtttgctggcaaagatgatggc
tctagttttaaagcagcactgctctcaggccctccaggtgttggcaagacaaccacagcc
tctctggtttgtcaggaattgggatatagctacgtggaactgaatgcaagtgacactcgg
agtaagaacagtttgaaggaggttgttgctgaatcactgaataataccagcatcacaggc
ttttattcaacttctcagcatgggtcaggcggagcagcccattcagtaagcacgaaacat
gctctcatcatggatgaagtagatggcatggcaggcaatgaggacaggggaggaattcag
gaattaattggtctgataaaacatacaaaaattcccattatttgtatgtgcaatgataga
aatcatcccaagattcgttctttggttcattattgttttgatcttcgttttcaaagacct
cgagttgaacagattaagggtgctatgatgtctattgcatttaaagagggtttgaagatc
ccccctccagctatgaatgaaataattttgggagccaatcaagatatcagacaggtttta
cacaatctgagtatgtggtgtgcacgaagtaaggcactaacctatgaccaggccaaggct
gattctcatagagccaagaaggatatcagactgggcccatttgatgttgcccggaaagtg
tttgcagctggagaggagactgctcatatgtcacttgtggacaagtcagatctgttcttt
catgattattcaatagcacccctctttgtccaggagaactacatacatgtgaagcctgta
gctgcagggggtgacatgaaaaagcacttgatgcttttaagcagagcagcagatagcata
tgtgatggtgacctagtggaccgtcagatccggagtaagcaaaactggagtcttctgccc
acacaggccatttatgccagtgttcttcctggagagttaatgagagggtacatgactcag
tttcctgccttcccaagctggttggggaagcactcatctaccggcaaacatgatcgtatt
gtacaggacctagcactgcacatgagtctcagaacttattccagcaaaaggactgtaaac
atggattatctgtcccatataagggatgcacttgtacagcccttgacctcacagggggta
gaaggagtacaggacgttattgctcttatggacacctactacttgatgaaagaagacttt
gagaatatcatggaaattagcagctggggaggcaaatctagtcccttctccaagctggac
cccaaggtgaaagcagccttcacaagaacttacaataaggaagcccaccttactccatat
tcgcttcaggcagtaaagatacccagacacagcacaggcccagcactggattctgaatac
agtgaagagttaaatgaagatgactctcaatctgatgagaaagaccaagactctgtggaa
actgatgcaatgatcaagaaaaagacaaaatcttcaaagccttcaaaatcagaaaaagat
aaagagtccagaaaaggaaaaggaaaaagttcaaagaagtga
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integrated database retrieval system
